RNA–Protein interactions for RNA: ENST00000225519.3

SHPK-201, Transcript of sedoheptulokinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHPK, Length 3,838 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPK-201ENST00000225519 BLOC1S2Q6QNY1 142 aa16.76■□□□□ 0.27
SHPK-201ENST00000225519 TPCN1Q9ULQ1 816 aa16.76■□□□□ 0.27
SHPK-201ENST00000225519 EIF2S2P20042 333 aaKnown RBP16.75■□□□□ 0.27
SHPK-201ENST00000225519 GORABQ5T7V8 394 aa16.75■□□□□ 0.27
SHPK-201ENST00000225519 LARP1Q6PKG0 1096 aaKnown RBP16.75■□□□□ 0.27
SHPK-201ENST00000225519 ST7Q9NRC1 585 aa16.75■□□□□ 0.27
SHPK-201ENST00000225519 HSP90AB4PQ58FF6 505 aa16.75■□□□□ 0.27
SHPK-201ENST00000225519 SSH3Q8TE77 659 aa16.75■□□□□ 0.27
SHPK-201ENST00000225519 GTF3C6Q969F1 213 aa16.75■□□□□ 0.27
SHPK-201ENST00000225519 ZSWIM6Q9HCJ5 1215 aa16.75■□□□□ 0.27
SHPK-201ENST00000225519 RBM8AQ9Y5S9 174 aaKnown RBP16.75■□□□□ 0.27
SHPK-201ENST00000225519 ELP1O95163 1332 aa16.74■□□□□ 0.27
SHPK-201ENST00000225519 HSP90B1P14625 803 aaKnown RBP16.74■□□□□ 0.27
SHPK-201ENST00000225519 IRX5P78411 483 aaPredicted RBP16.74■□□□□ 0.27
SHPK-201ENST00000225519 NRDCO43847 1150 aa16.74■□□□□ 0.27
SHPK-201ENST00000225519 BMS1Q14692 1282 aaKnown RBP16.74■□□□□ 0.27
SHPK-201ENST00000225519 PDIA4P13667 645 aaKnown RBP16.74■□□□□ 0.27
SHPK-201ENST00000225519 HDGFL1Q5TGJ6 251 aa16.73■□□□□ 0.27
SHPK-201ENST00000225519 HOMER1Q86YM7 354 aa16.73■□□□□ 0.27
SHPK-201ENST00000225519 FRMPD1Q5SYB0 1578 aa16.73■□□□□ 0.27
SHPK-201ENST00000225519 RNF20Q5VTR2 975 aa16.73■□□□□ 0.27
SHPK-201ENST00000225519 CREB3L3Q68CJ9 461 aa16.72■□□□□ 0.27
SHPK-201ENST00000225519 CCDC73Q6ZRK6 1079 aa16.72■□□□□ 0.27
SHPK-201ENST00000225519 CAVIN2O95810 425 aa16.72■□□□□ 0.27
SHPK-201ENST00000225519 PLCD3Q8N3E9 789 aa16.72■□□□□ 0.27
SHPK-201ENST00000225519 TM6SF1Q9BZW5 370 aa16.72■□□□□ 0.27
SHPK-201ENST00000225519 SNW1Q13573 536 aaKnown RBP16.72■□□□□ 0.27
SHPK-201ENST00000225519 ANKRD1Q15327 319 aa16.72■□□□□ 0.27
SHPK-201ENST00000225519 SYTL4Q96C24 671 aaPredicted RBP16.72■□□□□ 0.27
SHPK-201ENST00000225519 DDX11Q96FC9 970 aa16.72■□□□□ 0.27
SHPK-201ENST00000225519 STX1AQ16623 288 aa16.71■□□□□ 0.27
SHPK-201ENST00000225519 TEX35Q5T0J7 233 aa16.71■□□□□ 0.27
SHPK-201ENST00000225519 KIF2AO00139 706 aaPredicted RBP16.71■□□□□ 0.27
SHPK-201ENST00000225519 KINO60870 393 aaKnown RBP16.71■□□□□ 0.27
SHPK-201ENST00000225519 AMPHP49418 695 aa16.71■□□□□ 0.27
SHPK-201ENST00000225519 ERCC6LQ2NKX8 1250 aa16.71■□□□□ 0.27
SHPK-201ENST00000225519 POLR3GO15318 223 aaPredicted RBP16.7■□□□□ 0.26
SHPK-201ENST00000225519 ST3GAL1Q11201 340 aa16.7■□□□□ 0.26
SHPK-201ENST00000225519 ECHDC1Q9NTX5 307 aa16.7■□□□□ 0.26
SHPK-201ENST00000225519 DNAJC2Q99543 621 aaKnown RBP16.7■□□□□ 0.26
SHPK-201ENST00000225519 PHAXQ9H814 394 aaKnown RBP16.7■□□□□ 0.26
SHPK-201ENST00000225519 C11orf57Q6ZUT1 292 aaPredicted RBP16.7■□□□□ 0.26
SHPK-201ENST00000225519 HECW2Q9P2P5 1572 aa16.7■□□□□ 0.26
SHPK-201ENST00000225519 A0A087WWV3 80 aa16.69■□□□□ 0.26
SHPK-201ENST00000225519 SMC2O95347 1197 aa16.69■□□□□ 0.26
SHPK-201ENST00000225519 TNNT3P45378 269 aaPredicted RBP16.69■□□□□ 0.26
SHPK-201ENST00000225519 CCAR2Q8N163 923 aaKnown RBP16.69■□□□□ 0.26
SHPK-201ENST00000225519 ARGLU1Q9NWB6 273 aaPredicted RBP16.69■□□□□ 0.26
SHPK-201ENST00000225519 CFAP45Q9UL16 551 aa16.69■□□□□ 0.26
SHPK-201ENST00000225519 CRB1P82279 1406 aa16.69■□□□□ 0.26
SHPK-201ENST00000225519 CDC25BP30305 580 aa16.69■□□□□ 0.26
SHPK-201ENST00000225519 RBM6P78332 1123 aaKnown RBP16.69■□□□□ 0.26
SHPK-201ENST00000225519 MRFAP1L1Q96HT8 127 aa16.69■□□□□ 0.26
SHPK-201ENST00000225519 MAP3K19Q56UN5 1328 aa16.69■□□□□ 0.26
SHPK-201ENST00000225519 SYT10Q6XYQ8 523 aa16.69■□□□□ 0.26
SHPK-201ENST00000225519 PGBD1Q96JS3 809 aa16.69■□□□□ 0.26
SHPK-201ENST00000225519 NBPF7P0C2Y1 421 aaPredicted RBP16.68■□□□□ 0.26
SHPK-201ENST00000225519 AACSQ86V21 672 aa16.68■□□□□ 0.26
SHPK-201ENST00000225519 CEP57L1Q8IYX8 460 aa16.68■□□□□ 0.26
SHPK-201ENST00000225519 MNS1Q8NEH6 495 aa16.68■□□□□ 0.26
SHPK-201ENST00000225519 BRF1Q92994 677 aa16.68■□□□□ 0.26
SHPK-201ENST00000225519 FSD1Q9BTV5 496 aa16.68■□□□□ 0.26
SHPK-201ENST00000225519 TTC21AQ8NDW8 1320 aa16.68■□□□□ 0.26
SHPK-201ENST00000225519 TAF7Q15545 349 aaPredicted RBP16.68■□□□□ 0.26
SHPK-201ENST00000225519 FMNL2Q96PY5 1086 aa16.68■□□□□ 0.26
SHPK-201ENST00000225519 ARHGAP29Q52LW3 1261 aa16.68■□□□□ 0.26
SHPK-201ENST00000225519 CCAR1Q8IX12 1150 aaKnown RBP16.68■□□□□ 0.26
SHPK-201ENST00000225519 FAM227BQ96M60 508 aa16.68■□□□□ 0.26
SHPK-201ENST00000225519 ANO10Q9NW15 660 aa16.68■□□□□ 0.26
SHPK-201ENST00000225519 TTC41PQ6P2S7 1318 aa16.68■□□□□ 0.26
SHPK-201ENST00000225519 AOPEPQ8N6M6 819 aa16.67■□□□□ 0.26
SHPK-201ENST00000225519 SDF4Q9BRK5 362 aa16.67■□□□□ 0.26
SHPK-201ENST00000225519 PIK3C2BO00750 1634 aa16.67■□□□□ 0.26
SHPK-201ENST00000225519 TMCO3Q6UWJ1 677 aa16.67■□□□□ 0.26
SHPK-201ENST00000225519 UBXN4Q92575 508 aa16.67■□□□□ 0.26
SHPK-201ENST00000225519 EVI5LQ96CN4 794 aa16.67■□□□□ 0.26
SHPK-201ENST00000225519 SLC27A2O14975 620 aa16.67■□□□□ 0.26
SHPK-201ENST00000225519 JAK2O60674 1132 aa16.67■□□□□ 0.26
SHPK-201ENST00000225519 GSDMDP57764 484 aa16.67■□□□□ 0.26
SHPK-201ENST00000225519 NMIQ13287 307 aaPredicted RBP16.67■□□□□ 0.26
SHPK-201ENST00000225519 NYAP1Q6ZVC0 841 aa16.67■□□□□ 0.26
SHPK-201ENST00000225519 NAT10Q9H0A0 1025 aaKnown RBP16.67■□□□□ 0.26
SHPK-201ENST00000225519 C9orf78Q9NZ63 289 aaPredicted RBP16.67■□□□□ 0.26
SHPK-201ENST00000225519 CTAGE5O15320 804 aa16.66■□□□□ 0.26
SHPK-201ENST00000225519 HSPA2P54652 639 aa16.66■□□□□ 0.26
SHPK-201ENST00000225519 NECTIN1Q15223 517 aa16.66■□□□□ 0.26
SHPK-201ENST00000225519 ERCC4Q92889 916 aaPredicted RBP16.66■□□□□ 0.26
SHPK-201ENST00000225519 LTV1Q96GA3 475 aaPredicted RBP16.66■□□□□ 0.26
SHPK-201ENST00000225519 TRIM34Q9BYJ4 488 aa16.66■□□□□ 0.26
SHPK-201ENST00000225519 ARHGEF10O15013 1369 aa16.65■□□□□ 0.26
SHPK-201ENST00000225519 TTC21BQ7Z4L5 1316 aa16.65■□□□□ 0.26
SHPK-201ENST00000225519 ME1P48163 572 aa16.65■□□□□ 0.26
SHPK-201ENST00000225519 GNAT3A8MTJ3 354 aa16.65■□□□□ 0.26
SHPK-201ENST00000225519 HIP1O00291 1037 aa16.65■□□□□ 0.26
SHPK-201ENST00000225519 SFPQP23246 707 aaKnown RBP eCLIP16.65■□□□□ 0.26
SHPK-201ENST00000225519 TMC6Q7Z403 805 aa16.65■□□□□ 0.26
SHPK-201ENST00000225519 POLA2Q14181 598 aa16.65■□□□□ 0.26
SHPK-201ENST00000225519 IQCB1Q15051 598 aa16.65■□□□□ 0.26
SHPK-201ENST00000225519 SLFNL1Q499Z3 407 aa16.65■□□□□ 0.26
SHPK-201ENST00000225519 CLTCQ00610 1675 aaKnown RBP16.64■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms