RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 AACSQ86V21 672 aa20.68■□□□□ 0.9
USB1-201ENST00000219281 DNM1Q05193 864 aaKnown RBP20.67■□□□□ 0.9
USB1-201ENST00000219281 KIAA2012Q0VF49 1180 aa20.67■□□□□ 0.9
USB1-201ENST00000219281 KSR2Q6VAB6 950 aa20.67■□□□□ 0.9
USB1-201ENST00000219281 ERC1Q8IUD2 1116 aa20.67■□□□□ 0.9
USB1-201ENST00000219281 EVI5LQ96CN4 794 aa20.67■□□□□ 0.9
USB1-201ENST00000219281 MTMR6Q9Y217 621 aa20.67■□□□□ 0.9
USB1-201ENST00000219281 ZSCAN31Q96LW9 406 aaPredicted RBP20.67■□□□□ 0.9
USB1-201ENST00000219281 PRAMEF22A3QJZ6 481 aa20.66■□□□□ 0.9
USB1-201ENST00000219281 ADCY5O95622 1261 aa20.66■□□□□ 0.9
USB1-201ENST00000219281 KCNB2Q92953 911 aa20.66■□□□□ 0.9
USB1-201ENST00000219281 TM6SF1Q9BZW5 370 aa20.66■□□□□ 0.9
USB1-201ENST00000219281 SH2B1Q9NRF2 756 aaPredicted RBP20.66■□□□□ 0.9
USB1-201ENST00000219281 NLRP2Q9NX02 1062 aa20.66■□□□□ 0.9
USB1-201ENST00000219281 GIGYF1O75420 1035 aaPredicted RBP20.66■□□□□ 0.9
USB1-201ENST00000219281 NECTIN1Q15223 517 aa20.66■□□□□ 0.9
USB1-201ENST00000219281 ZNF830Q96NB3 372 aaPredicted RBP20.66■□□□□ 0.9
USB1-201ENST00000219281 FAM13BQ9NYF5 915 aa20.66■□□□□ 0.9
USB1-201ENST00000219281 SPATA31A3Q5VYP0 1347 aa20.65■□□□□ 0.9
USB1-201ENST00000219281 CCDC171Q6TFL3 1326 aa20.65■□□□□ 0.9
USB1-201ENST00000219281 ST3GAL1Q11201 340 aa20.65■□□□□ 0.9
USB1-201ENST00000219281 CHRNA2Q15822 529 aa20.65■□□□□ 0.9
USB1-201ENST00000219281 ME3Q16798 604 aa20.65■□□□□ 0.9
USB1-201ENST00000219281 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.65■□□□□ 0.9
USB1-201ENST00000219281 HEG1Q9ULI3 1381 aa20.65■□□□□ 0.9
USB1-201ENST00000219281 VPS37CA5D8V6 355 aaPredicted RBP20.65■□□□□ 0.9
USB1-201ENST00000219281 GIMAP6Q6P9H5 292 aa20.65■□□□□ 0.9
USB1-201ENST00000219281 VSIG10Q8N0Z9 540 aa20.65■□□□□ 0.9
USB1-201ENST00000219281 NECAB1Q8N987 351 aa20.65■□□□□ 0.9
USB1-201ENST00000219281 FAM227BQ96M60 508 aa20.65■□□□□ 0.9
USB1-201ENST00000219281 RBM8AQ9Y5S9 174 aaKnown RBP20.65■□□□□ 0.9
USB1-201ENST00000219281 ZKSCAN1P17029 563 aaPredicted RBP20.64■□□□□ 0.89
USB1-201ENST00000219281 KCNJ4P48050 445 aa20.64■□□□□ 0.89
USB1-201ENST00000219281 SASS6Q6UVJ0 657 aa20.64■□□□□ 0.89
USB1-201ENST00000219281 SUCLG2Q96I99 432 aa20.64■□□□□ 0.89
USB1-201ENST00000219281 CREB3L3Q68CJ9 461 aa20.64■□□□□ 0.89
USB1-201ENST00000219281 OVOS2A0A0G2JMS6 1433 aa20.63■□□□□ 0.89
USB1-201ENST00000219281 TNS3Q68CZ2 1445 aa20.63■□□□□ 0.89
USB1-201ENST00000219281 KDM4FA0A1W2PPD8 638 aa20.63■□□□□ 0.89
USB1-201ENST00000219281 SASH1O94885 1247 aa20.63■□□□□ 0.89
USB1-201ENST00000219281 NMIQ13287 307 aaPredicted RBP20.63■□□□□ 0.89
USB1-201ENST00000219281 BRINP3Q76B58 766 aa20.63■□□□□ 0.89
USB1-201ENST00000219281 EAF2Q96CJ1 260 aaPredicted RBP20.63■□□□□ 0.89
USB1-201ENST00000219281 CCDC8Q9H0W5 538 aaPredicted RBP20.63■□□□□ 0.89
USB1-201ENST00000219281 HDAC5Q9UQL6 1122 aa20.63■□□□□ 0.89
USB1-201ENST00000219281 COL18A1P39060 1754 aa20.63■□□□□ 0.89
USB1-201ENST00000219281 G3BP1Q13283 466 aaKnown RBP eCLIP20.62■□□□□ 0.89
USB1-201ENST00000219281 RAPGEF4Q8WZA2 1011 aa20.62■□□□□ 0.89
USB1-201ENST00000219281 TPCN1Q9ULQ1 816 aa20.62■□□□□ 0.89
USB1-201ENST00000219281 AIMP1Q12904 312 aaKnown RBP20.62■□□□□ 0.89
USB1-201ENST00000219281 KAZALD1Q96I82 304 aa20.62■□□□□ 0.89
USB1-201ENST00000219281 FUCA2Q9BTY2 467 aa20.62■□□□□ 0.89
USB1-201ENST00000219281 BICC1Q9H694 974 aaKnown RBP20.62■□□□□ 0.89
USB1-201ENST00000219281 GRM8O00222 908 aa20.61■□□□□ 0.89
USB1-201ENST00000219281 KDM4AO75164 1064 aa20.61■□□□□ 0.89
USB1-201ENST00000219281 MAP4K1Q92918 833 aa20.61■□□□□ 0.89
USB1-201ENST00000219281 COL9A3Q14050 684 aaPredicted RBP20.61■□□□□ 0.89
USB1-201ENST00000219281 LINS1Q8NG48 757 aa20.61■□□□□ 0.89
USB1-201ENST00000219281 TTC12Q9H892 705 aaPredicted RBP20.61■□□□□ 0.89
USB1-201ENST00000219281 TLR7Q9NYK1 1049 aaKnown RBP20.61■□□□□ 0.89
USB1-201ENST00000219281 PLCB2Q00722 1185 aa20.6■□□□□ 0.89
USB1-201ENST00000219281 XIRP1Q702N8 1843 aaKnown RBP20.6■□□□□ 0.89
USB1-201ENST00000219281 HIP1O00291 1037 aa20.6■□□□□ 0.89
USB1-201ENST00000219281 SLC27A2O14975 620 aa20.6■□□□□ 0.89
USB1-201ENST00000219281 DNTTIP2Q5QJE6 756 aaKnown RBP20.6■□□□□ 0.89
USB1-201ENST00000219281 LARP1BQ659C4 914 aaKnown RBP20.6■□□□□ 0.89
USB1-201ENST00000219281 SIL1Q9H173 461 aa20.6■□□□□ 0.89
USB1-201ENST00000219281 DYNC1I1O14576 645 aa20.59■□□□□ 0.89
USB1-201ENST00000219281 PHKG2P15735 406 aa20.59■□□□□ 0.89
USB1-201ENST00000219281 BOLA2Q9H3K6 86 aa20.59■□□□□ 0.89
USB1-201ENST00000219281 MEGF6O75095 1541 aa20.59■□□□□ 0.89
USB1-201ENST00000219281 CSB-PGBD3P0DP91 1061 aa20.58■□□□□ 0.89
USB1-201ENST00000219281 TATP17735 454 aaPredicted RBP20.58■□□□□ 0.89
USB1-201ENST00000219281 PSMA5P28066 241 aa20.58■□□□□ 0.89
USB1-201ENST00000219281 PIBF1Q8WXW3 757 aa20.58■□□□□ 0.89
USB1-201ENST00000219281 A0A0D9SFI3 127 aa20.58■□□□□ 0.88
USB1-201ENST00000219281 KDM6AO15550 1401 aaPredicted RBP20.58■□□□□ 0.88
USB1-201ENST00000219281 TCEANC2Q96MN5 208 aa20.58■□□□□ 0.88
USB1-201ENST00000219281 LMTK3Q96Q04 1460 aa20.58■□□□□ 0.88
USB1-201ENST00000219281 ADAMTS7Q9UKP4 1686 aa20.58■□□□□ 0.88
USB1-201ENST00000219281 UTYO14607 1347 aa20.57■□□□□ 0.88
USB1-201ENST00000219281 DDX58O95786 925 aaKnown RBP20.57■□□□□ 0.88
USB1-201ENST00000219281 SLC39A6Q13433 755 aa20.57■□□□□ 0.88
USB1-201ENST00000219281 NOLC1Q14978 699 aaKnown RBP eCLIP20.57■□□□□ 0.88
USB1-201ENST00000219281 FSD1Q9BTV5 496 aa20.57■□□□□ 0.88
USB1-201ENST00000219281 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.57■□□□□ 0.88
USB1-201ENST00000219281 FERMT3Q86UX7 667 aa20.57■□□□□ 0.88
USB1-201ENST00000219281 C17orf53Q8N3J3 647 aaPredicted RBP20.57■□□□□ 0.88
USB1-201ENST00000219281 KLHDC4Q8TBB5 520 aa20.57■□□□□ 0.88
USB1-201ENST00000219281 SLC52A2Q9HAB3 445 aa20.57■□□□□ 0.88
USB1-201ENST00000219281 ZNF335Q9H4Z2 1342 aaPredicted RBP20.56■□□□□ 0.88
USB1-201ENST00000219281 AP5Z1O43299 807 aa20.56■□□□□ 0.88
USB1-201ENST00000219281 CDC37L1Q7L3B6 337 aa20.56■□□□□ 0.88
USB1-201ENST00000219281 NFATC2IPQ8NCF5 419 aa20.56■□□□□ 0.88
USB1-201ENST00000219281 SIPA1L3O60292 1781 aaPredicted RBP20.56■□□□□ 0.88
USB1-201ENST00000219281 STRCQ7RTU9 1775 aa20.56■□□□□ 0.88
USB1-201ENST00000219281 CPDO75976 1380 aa20.56■□□□□ 0.88
USB1-201ENST00000219281 CYP27B1O15528 508 aa20.56■□□□□ 0.88
USB1-201ENST00000219281 FAM173BQ6P4H8 233 aa20.56■□□□□ 0.88
USB1-201ENST00000219281 ZNF790Q6PG37 636 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms