RNA–Protein interactions for RNA: ENST00000216416.8

CNIH1-201, Transcript of cornichon family AMPA receptor auxiliary protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CNIH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH1-201ENST00000216416 NIP7Q9Y221 180 aaKnown RBP eCLIP8.1□□□□□ -1.11
CNIH1-201ENST00000216416 SLIT2O94813 1529 aa8.09□□□□□ -1.11
CNIH1-201ENST00000216416 TAF5LO75529 589 aa8.09□□□□□ -1.11
CNIH1-201ENST00000216416 TCIRG1Q13488 830 aa8.09□□□□□ -1.11
CNIH1-201ENST00000216416 SUSD4Q5VX71 490 aa8.09□□□□□ -1.11
CNIH1-201ENST00000216416 CWC27Q6UX04 472 aaKnown RBP8.09□□□□□ -1.11
CNIH1-201ENST00000216416 CCNL1Q9UK58 526 aaPredicted RBP8.09□□□□□ -1.11
CNIH1-201ENST00000216416 C3orf67Q6ZVT6 689 aa8.09□□□□□ -1.11
CNIH1-201ENST00000216416 DNAJC2Q99543 621 aaKnown RBP8.09□□□□□ -1.11
CNIH1-201ENST00000216416 ALDH1L1O75891 902 aa8.09□□□□□ -1.11
CNIH1-201ENST00000216416 USPL1Q5W0Q7 1092 aa8.09□□□□□ -1.11
CNIH1-201ENST00000216416 MYH14Q7Z406 1995 aaKnown RBP8.09□□□□□ -1.11
CNIH1-201ENST00000216416 KCPQ6ZWJ8 1503 aa8.09□□□□□ -1.12
CNIH1-201ENST00000216416 CLASRPQ8N2M8 674 aaKnown RBP8.09□□□□□ -1.12
CNIH1-201ENST00000216416 IBTKQ9P2D0 1353 aaPredicted RBP8.08□□□□□ -1.12
CNIH1-201ENST00000216416 NPHP1O15259 732 aa8.08□□□□□ -1.12
CNIH1-201ENST00000216416 IFIT2P09913 472 aaKnown RBP8.08□□□□□ -1.12
CNIH1-201ENST00000216416 GTF2E1P29083 439 aaPredicted RBP8.08□□□□□ -1.12
CNIH1-201ENST00000216416 FOXO4P98177 505 aa8.08□□□□□ -1.12
CNIH1-201ENST00000216416 AAMPQ13685 434 aa8.08□□□□□ -1.12
CNIH1-201ENST00000216416 POLA2Q14181 598 aa8.08□□□□□ -1.12
CNIH1-201ENST00000216416 FAM196AQ6ZSG2 479 aa8.08□□□□□ -1.12
CNIH1-201ENST00000216416 NLRP10Q86W26 655 aa8.08□□□□□ -1.12
CNIH1-201ENST00000216416 CCDC87Q9NVE4 849 aa8.08□□□□□ -1.12
CNIH1-201ENST00000216416 JAG2Q9Y219 1238 aa8.08□□□□□ -1.12
CNIH1-201ENST00000216416 NOP58Q9Y2X3 529 aaKnown RBP8.08□□□□□ -1.12
CNIH1-201ENST00000216416 SHANK3Q9BYB0 1731 aa8.08□□□□□ -1.12
CNIH1-201ENST00000216416 CENPFP49454 3210 aa8.08□□□□□ -1.12
CNIH1-201ENST00000216416 BMP2KLQ5H9B9 411 aa8.08□□□□□ -1.12
CNIH1-201ENST00000216416 TAF7LQ5H9L4 462 aa8.08□□□□□ -1.12
CNIH1-201ENST00000216416 GIGYF2Q6Y7W6 1299 aaKnown RBP8.08□□□□□ -1.12
CNIH1-201ENST00000216416 DDX46Q7L014 1031 aaKnown RBP8.08□□□□□ -1.12
CNIH1-201ENST00000216416 ANO2Q9NQ90 1003 aa8.08□□□□□ -1.12
CNIH1-201ENST00000216416 CPA1P15085 419 aa8.08□□□□□ -1.12
CNIH1-201ENST00000216416 CASP7P55210 303 aa8.08□□□□□ -1.12
CNIH1-201ENST00000216416 SEC62Q99442 399 aaKnown RBP8.08□□□□□ -1.12
CNIH1-201ENST00000216416 TNS2Q63HR2 1409 aa8.08□□□□□ -1.12
CNIH1-201ENST00000216416 SIPA1L3O60292 1781 aaPredicted RBP8.07□□□□□ -1.12
CNIH1-201ENST00000216416 IRS4O14654 1257 aaPredicted RBP8.07□□□□□ -1.12
CNIH1-201ENST00000216416 ADORA1P30542 326 aa8.07□□□□□ -1.12
CNIH1-201ENST00000216416 ITGB4P16144 1822 aa8.07□□□□□ -1.12
CNIH1-201ENST00000216416 KIF1BPQ96EK5 621 aa8.07□□□□□ -1.12
CNIH1-201ENST00000216416 UPF3BQ9BZI7 483 aaKnown RBP8.07□□□□□ -1.12
CNIH1-201ENST00000216416 DAXXQ9UER7 740 aaPredicted RBP8.07□□□□□ -1.12
CNIH1-201ENST00000216416 DBNLQ9UJU6 430 aaKnown RBP8.07□□□□□ -1.12
CNIH1-201ENST00000216416 PLCH1Q4KWH8 1693 aa8.07□□□□□ -1.12
CNIH1-201ENST00000216416 MAP3K15Q6ZN16 1313 aa8.07□□□□□ -1.12
CNIH1-201ENST00000216416 EIF5P55010 431 aaKnown RBP8.07□□□□□ -1.12
CNIH1-201ENST00000216416 BARGINQ6ZT62 677 aa8.07□□□□□ -1.12
CNIH1-201ENST00000216416 TRPC5Q9UL62 973 aaPredicted RBP8.07□□□□□ -1.12
CNIH1-201ENST00000216416 FAM227BQ96M60 508 aa8.07□□□□□ -1.12
CNIH1-201ENST00000216416 PDGFDQ9GZP0 370 aaPredicted RBP8.07□□□□□ -1.12
CNIH1-201ENST00000216416 UPF2Q9HAU5 1272 aaKnown RBP8.07□□□□□ -1.12
CNIH1-201ENST00000216416 TAOK2Q9UL54 1235 aa8.07□□□□□ -1.12
CNIH1-201ENST00000216416 PALD1Q9ULE6 856 aa8.07□□□□□ -1.12
CNIH1-201ENST00000216416 PKD1L3Q7Z443 1732 aa8.07□□□□□ -1.12
CNIH1-201ENST00000216416 COL14A1Q05707 1796 aaKnown RBP8.07□□□□□ -1.12
CNIH1-201ENST00000216416 H7C1W4 665 aa8.06□□□□□ -1.12
CNIH1-201ENST00000216416 RFX5P48382 616 aaPredicted RBP8.06□□□□□ -1.12
CNIH1-201ENST00000216416 MSL1Q68DK7 614 aa8.06□□□□□ -1.12
CNIH1-201ENST00000216416 TCEANC2Q96MN5 208 aa8.06□□□□□ -1.12
CNIH1-201ENST00000216416 ANTXR1Q9H6X2 564 aa8.06□□□□□ -1.12
CNIH1-201ENST00000216416 THRAP3Q9Y2W1 955 aaKnown RBP8.06□□□□□ -1.12
CNIH1-201ENST00000216416 CCDC57Q2TAC2 916 aa8.06□□□□□ -1.12
CNIH1-201ENST00000216416 TBC1D9BQ66K14 1250 aa8.06□□□□□ -1.12
CNIH1-201ENST00000216416 LDHAL6AQ6ZMR3 332 aa8.06□□□□□ -1.12
CNIH1-201ENST00000216416 CCDC129Q6ZRS4 1044 aa8.06□□□□□ -1.12
CNIH1-201ENST00000216416 PI4K2BQ8TCG2 481 aa8.06□□□□□ -1.12
CNIH1-201ENST00000216416 PPFIA3O75145 1194 aa8.06□□□□□ -1.12
CNIH1-201ENST00000216416 ITGA6P23229 1130 aa8.06□□□□□ -1.12
CNIH1-201ENST00000216416 FKBP4Q02790 459 aaKnown RBP eCLIP8.06□□□□□ -1.12
CNIH1-201ENST00000216416 POTEAQ6S8J7 498 aa8.06□□□□□ -1.12
CNIH1-201ENST00000216416 TBC1D32Q96NH3 1257 aa8.06□□□□□ -1.12
CNIH1-201ENST00000216416 SCARF1Q14162 830 aa8.05□□□□□ -1.12
CNIH1-201ENST00000216416 TPRNQ4KMQ1 711 aa8.05□□□□□ -1.12
CNIH1-201ENST00000216416 ISCA1Q9BUE6 129 aa8.05□□□□□ -1.12
CNIH1-201ENST00000216416 KRT27Q7Z3Y8 459 aa8.05□□□□□ -1.12
CNIH1-201ENST00000216416 ARHGEF1Q92888 912 aaKnown RBP8.05□□□□□ -1.12
CNIH1-201ENST00000216416 TBC1D2Q9BYX2 928 aa8.05□□□□□ -1.12
CNIH1-201ENST00000216416 PARP4Q9UKK3 1724 aaKnown RBP8.05□□□□□ -1.12
CNIH1-201ENST00000216416 DOT1LQ8TEK3 1739 aa8.05□□□□□ -1.12
CNIH1-201ENST00000216416 CACNA1FO60840 1977 aa8.05□□□□□ -1.12
CNIH1-201ENST00000216416 PROM2Q8N271 834 aa8.05□□□□□ -1.12
CNIH1-201ENST00000216416 CCDC191Q8NCU4 936 aa8.05□□□□□ -1.12
CNIH1-201ENST00000216416 TTLL11Q8NHH1 800 aa8.05□□□□□ -1.12
CNIH1-201ENST00000216416 CHAMP1Q96JM3 812 aa8.05□□□□□ -1.12
CNIH1-201ENST00000216416 TAF6LQ9Y6J9 622 aa8.05□□□□□ -1.12
CNIH1-201ENST00000216416 SPATA31A6Q5VVP1 1343 aa8.05□□□□□ -1.12
CNIH1-201ENST00000216416 GLI3P10071 1580 aa8.05□□□□□ -1.12
CNIH1-201ENST00000216416 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.05□□□□□ -1.12
CNIH1-201ENST00000216416 CDC45O75419 566 aa8.05□□□□□ -1.12
CNIH1-201ENST00000216416 ERFEQ4G0M1 354 aa8.05□□□□□ -1.12
CNIH1-201ENST00000216416 FOXD4L5Q5VV16 416 aaPredicted RBP8.05□□□□□ -1.12
CNIH1-201ENST00000216416 ATG9AQ7Z3C6 839 aa8.05□□□□□ -1.12
CNIH1-201ENST00000216416 STK11IPQ8N1F8 1099 aa8.05□□□□□ -1.12
CNIH1-201ENST00000216416 FOXD4L4Q8WXT5 416 aaPredicted RBP8.05□□□□□ -1.12
CNIH1-201ENST00000216416 GPR101Q96P66 508 aaPredicted RBP8.05□□□□□ -1.12
CNIH1-201ENST00000216416 MRC1P22897 1456 aa8.04□□□□□ -1.12
CNIH1-201ENST00000216416 CAMTA2O94983 1202 aa8.04□□□□□ -1.12
CNIH1-201ENST00000216416 CNNM1Q9NRU3 951 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms