RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 IQCA1LA6NCM1 817 aa20.81■□□□□ 0.92
ERCC1-201ENST00000013807 FZD9O00144 591 aa20.81■□□□□ 0.92
ERCC1-201ENST00000013807 GPTP24298 496 aa20.81■□□□□ 0.92
ERCC1-201ENST00000013807 OLFM4Q6UX06 510 aa20.81■□□□□ 0.92
ERCC1-201ENST00000013807 RNF123Q5XPI4 1314 aa20.8■□□□□ 0.92
ERCC1-201ENST00000013807 LAMB2P55268 1798 aa20.8■□□□□ 0.92
ERCC1-201ENST00000013807 EIF2S2P20042 333 aaKnown RBP20.8■□□□□ 0.92
ERCC1-201ENST00000013807 IARSP41252 1262 aaKnown RBP20.8■□□□□ 0.92
ERCC1-201ENST00000013807 PROSER3Q2NL68 480 aa20.8■□□□□ 0.92
ERCC1-201ENST00000013807 SYNE4Q8N205 404 aa20.8■□□□□ 0.92
ERCC1-201ENST00000013807 ZNF277Q9NRM2 450 aaPredicted RBP20.8■□□□□ 0.92
ERCC1-201ENST00000013807 CHADLQ6NUI6 762 aa20.79■□□□□ 0.92
ERCC1-201ENST00000013807 DDX21Q9NR30 783 aaKnown RBP eCLIP20.79■□□□□ 0.92
ERCC1-201ENST00000013807 ADAMTS8Q9UP79 889 aa20.79■□□□□ 0.92
ERCC1-201ENST00000013807 ADAMTSL1Q8N6G6 1762 aa20.79■□□□□ 0.92
ERCC1-201ENST00000013807 HOXB7P09629 217 aa20.78■□□□□ 0.92
ERCC1-201ENST00000013807 RPGRQ92834 1020 aaKnown RBP20.78■□□□□ 0.92
ERCC1-201ENST00000013807 PRKRIP1Q9H875 184 aaPredicted RBP20.78■□□□□ 0.92
ERCC1-201ENST00000013807 WDR43Q15061 677 aaKnown RBP eCLIP20.77■□□□□ 0.92
ERCC1-201ENST00000013807 HSP90AB3PQ58FF7 597 aa20.77■□□□□ 0.92
ERCC1-201ENST00000013807 COPS6Q7L5N1 327 aa20.77■□□□□ 0.92
ERCC1-201ENST00000013807 CCDC146Q8IYE0 955 aa20.77■□□□□ 0.92
ERCC1-201ENST00000013807 RBM17Q96I25 401 aaKnown RBP20.77■□□□□ 0.92
ERCC1-201ENST00000013807 TAF1DQ9H5J8 278 aaPredicted RBP20.77■□□□□ 0.92
ERCC1-201ENST00000013807 NLRP3Q96P20 1036 aa20.76■□□□□ 0.91
ERCC1-201ENST00000013807 UTP14AQ9BVJ6 771 aaKnown RBP20.76■□□□□ 0.91
ERCC1-201ENST00000013807 ZNF541Q9H0D2 1346 aa20.76■□□□□ 0.91
ERCC1-201ENST00000013807 ANXA1P04083 346 aa20.75■□□□□ 0.91
ERCC1-201ENST00000013807 POTEIP0CG38 1075 aa20.75■□□□□ 0.91
ERCC1-201ENST00000013807 POTEJP0CG39 1038 aa20.75■□□□□ 0.91
ERCC1-201ENST00000013807 NEUROD2Q15784 382 aa20.75■□□□□ 0.91
ERCC1-201ENST00000013807 LDHDQ86WU2 507 aa20.75■□□□□ 0.91
ERCC1-201ENST00000013807 GPC2Q8N158 579 aa20.75■□□□□ 0.91
ERCC1-201ENST00000013807 CFAP44Q96MT7 982 aa20.75■□□□□ 0.91
ERCC1-201ENST00000013807 TCIRG1Q13488 830 aa20.74■□□□□ 0.91
ERCC1-201ENST00000013807 C3orf67Q6ZVT6 689 aa20.74■□□□□ 0.91
ERCC1-201ENST00000013807 NLRP10Q86W26 655 aa20.74■□□□□ 0.91
ERCC1-201ENST00000013807 XAGE3Q8WTP9 111 aa20.74■□□□□ 0.91
ERCC1-201ENST00000013807 VPS33BQ9H267 617 aa20.74■□□□□ 0.91
ERCC1-201ENST00000013807 COL4A5P29400 1685 aa20.73■□□□□ 0.91
ERCC1-201ENST00000013807 KRT24Q2M2I5 525 aa20.73■□□□□ 0.91
ERCC1-201ENST00000013807 JDP2Q8WYK2 163 aa20.73■□□□□ 0.91
ERCC1-201ENST00000013807 CREBZFQ9NS37 354 aa20.73■□□□□ 0.91
ERCC1-201ENST00000013807 PASKQ96RG2 1323 aa20.73■□□□□ 0.91
ERCC1-201ENST00000013807 ZNF853P0CG23 659 aa20.72■□□□□ 0.91
ERCC1-201ENST00000013807 HACL1Q9UJ83 578 aa20.72■□□□□ 0.91
ERCC1-201ENST00000013807 ATP6V0A2Q9Y487 856 aa20.72■□□□□ 0.91
ERCC1-201ENST00000013807 TAF1P21675 1872 aa20.72■□□□□ 0.91
ERCC1-201ENST00000013807 DDX60Q8IY21 1712 aaKnown RBP20.71■□□□□ 0.91
ERCC1-201ENST00000013807 PPEF1O14829 653 aaPredicted RBP20.71■□□□□ 0.91
ERCC1-201ENST00000013807 BBOX1O75936 387 aa20.71■□□□□ 0.91
ERCC1-201ENST00000013807 ITGBL1O95965 494 aaPredicted RBP20.71■□□□□ 0.91
ERCC1-201ENST00000013807 PNMA8AQ86V59 439 aaPredicted RBP20.71■□□□□ 0.91
ERCC1-201ENST00000013807 DBF4Q9UBU7 674 aaPredicted RBP20.71■□□□□ 0.91
ERCC1-201ENST00000013807 AIMP1Q12904 312 aaKnown RBP20.7■□□□□ 0.9
ERCC1-201ENST00000013807 RTFDC1Q9BY42 306 aaPredicted RBP20.7■□□□□ 0.9
ERCC1-201ENST00000013807 CHPF2Q9P2E5 772 aa20.7■□□□□ 0.9
ERCC1-201ENST00000013807 EPHX2P34913 555 aa20.69■□□□□ 0.9
ERCC1-201ENST00000013807 HDGFL1Q5TGJ6 251 aa20.69■□□□□ 0.9
ERCC1-201ENST00000013807 PLBD2Q8NHP8 589 aa20.69■□□□□ 0.9
ERCC1-201ENST00000013807 NECTIN2Q92692 538 aa20.69■□□□□ 0.9
ERCC1-201ENST00000013807 ABCC4O15439 1325 aa20.69■□□□□ 0.9
ERCC1-201ENST00000013807 LTBP1Q14766 1721 aa20.68■□□□□ 0.9
ERCC1-201ENST00000013807 EIF6P56537 245 aaKnown RBP20.68■□□□□ 0.9
ERCC1-201ENST00000013807 ANKRD13DQ6ZTN6 518 aa20.68■□□□□ 0.9
ERCC1-201ENST00000013807 SP8Q8IXZ3 490 aa20.68■□□□□ 0.9
ERCC1-201ENST00000013807 ISCA1Q9BUE6 129 aa20.68■□□□□ 0.9
ERCC1-201ENST00000013807 LAS1LQ9Y4W2 734 aaKnown RBP20.68■□□□□ 0.9
ERCC1-201ENST00000013807 SH3TC1Q8TE82 1336 aa20.68■□□□□ 0.9
ERCC1-201ENST00000013807 LRRC37AA6NMS7 1700 aa20.67■□□□□ 0.9
ERCC1-201ENST00000013807 TRIM28Q13263 835 aaKnown RBP20.67■□□□□ 0.9
ERCC1-201ENST00000013807 LARGE2Q8N3Y3 721 aa20.67■□□□□ 0.9
ERCC1-201ENST00000013807 MBIPQ9NS73 344 aa20.67■□□□□ 0.9
ERCC1-201ENST00000013807 HYPKQ9NX55 129 aa20.67■□□□□ 0.9
ERCC1-201ENST00000013807 TRMT112Q9UI30 125 aaKnown RBP20.67■□□□□ 0.9
ERCC1-201ENST00000013807 DUSP27Q5VZP5 1158 aa20.66■□□□□ 0.9
ERCC1-201ENST00000013807 TMX4Q9H1E5 349 aaPredicted RBP20.66■□□□□ 0.9
ERCC1-201ENST00000013807 IFT57Q9NWB7 429 aa20.66■□□□□ 0.9
ERCC1-201ENST00000013807 HCLS1P14317 486 aaPredicted RBP20.65■□□□□ 0.9
ERCC1-201ENST00000013807 TMC4Q7Z404 712 aa20.65■□□□□ 0.9
ERCC1-201ENST00000013807 SLC51AQ86UW1 340 aa20.65■□□□□ 0.9
ERCC1-201ENST00000013807 SUPT20HQ8NEM7 779 aa20.65■□□□□ 0.9
ERCC1-201ENST00000013807 APAF1O14727 1248 aa20.64■□□□□ 0.89
ERCC1-201ENST00000013807 SCNN1DP51172 638 aa20.64■□□□□ 0.89
ERCC1-201ENST00000013807 CALD1Q05682 793 aaKnown RBP20.64■□□□□ 0.89
ERCC1-201ENST00000013807 TRPM7Q96QT4 1865 aa20.63■□□□□ 0.89
ERCC1-201ENST00000013807 GNAI1P63096 354 aa20.63■□□□□ 0.89
ERCC1-201ENST00000013807 GRAPQ13588 217 aa20.63■□□□□ 0.89
ERCC1-201ENST00000013807 SF3B3Q15393 1217 aaKnown RBP20.63■□□□□ 0.89
ERCC1-201ENST00000013807 EAPPQ56P03 285 aaPredicted RBP20.63■□□□□ 0.89
ERCC1-201ENST00000013807 DDX46Q7L014 1031 aaKnown RBP20.63■□□□□ 0.89
ERCC1-201ENST00000013807 GRAPLQ8TC17 118 aaPredicted RBP20.63■□□□□ 0.89
ERCC1-201ENST00000013807 CNTNAP1P78357 1384 aa20.62■□□□□ 0.89
ERCC1-201ENST00000013807 TMEM88BA6NKF7 163 aa20.62■□□□□ 0.89
ERCC1-201ENST00000013807 TCERG1O14776 1098 aaKnown RBP20.62■□□□□ 0.89
ERCC1-201ENST00000013807 PPIP5K2O43314 1243 aa20.62■□□□□ 0.89
ERCC1-201ENST00000013807 NIM1KQ8IY84 436 aa20.62■□□□□ 0.89
ERCC1-201ENST00000013807 CNTROBQ8N137 903 aa20.62■□□□□ 0.89
ERCC1-201ENST00000013807 KIAA2012Q0VF49 1180 aa20.61■□□□□ 0.89
ERCC1-201ENST00000013807 COL13A1Q5TAT6 717 aaPredicted RBP20.61■□□□□ 0.89
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