RNA–Protein interactions for RNA: ENST00000011473.6

SYPL1-201, Transcript of synaptophysin like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYPL1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-201ENST00000011473 FAM89AQ96GI7 184 aa15.34■□□□□ 0.05
SYPL1-201ENST00000011473 UTP14AQ9BVJ6 771 aaKnown RBP15.34■□□□□ 0.05
SYPL1-201ENST00000011473 TRMT112Q9UI30 125 aaKnown RBP15.34■□□□□ 0.05
SYPL1-201ENST00000011473 AFDNP55196 1824 aaKnown RBP15.33■□□□□ 0.05
SYPL1-201ENST00000011473 NEXNQ0ZGT2 675 aa15.33■□□□□ 0.04
SYPL1-201ENST00000011473 NYXQ9GZU5 481 aa15.32■□□□□ 0.04
SYPL1-201ENST00000011473 NRXN2Q9P2S2 1712 aa15.32■□□□□ 0.04
SYPL1-201ENST00000011473 NEURL1BA8MQ27 555 aa15.32■□□□□ 0.04
SYPL1-201ENST00000011473 DPEP1P16444 411 aa15.32■□□□□ 0.04
SYPL1-201ENST00000011473 TNNQ9UQP3 1299 aa15.32■□□□□ 0.04
SYPL1-201ENST00000011473 PTPRCP08575 1304 aa15.32■□□□□ 0.04
SYPL1-201ENST00000011473 PXDNLA1KZ92 1463 aa15.32■□□□□ 0.04
SYPL1-201ENST00000011473 HCLS1P14317 486 aaPredicted RBP15.31■□□□□ 0.04
SYPL1-201ENST00000011473 BEND3Q5T5X7 828 aa15.31■□□□□ 0.04
SYPL1-201ENST00000011473 C3orf67Q6ZVT6 689 aa15.31■□□□□ 0.04
SYPL1-201ENST00000011473 BRIP1Q9BX63 1249 aa15.31■□□□□ 0.04
SYPL1-201ENST00000011473 CWC25Q9NXE8 425 aaPredicted RBP15.31■□□□□ 0.04
SYPL1-201ENST00000011473 TRIM28Q13263 835 aaKnown RBP15.31■□□□□ 0.04
SYPL1-201ENST00000011473 CCDC191Q8NCU4 936 aa15.31■□□□□ 0.04
SYPL1-201ENST00000011473 ANKRD36CQ5JPF3 1778 aa15.3■□□□□ 0.04
SYPL1-201ENST00000011473 BRPF1P55201 1214 aaPredicted RBP15.3■□□□□ 0.04
SYPL1-201ENST00000011473 LINS1Q8NG48 757 aa15.3■□□□□ 0.04
SYPL1-201ENST00000011473 SH3TC1Q8TE82 1336 aa15.3■□□□□ 0.04
SYPL1-201ENST00000011473 KIF16BQ96L93 1317 aa15.29■□□□□ 0.04
SYPL1-201ENST00000011473 KCNA3P22001 575 aa15.29■□□□□ 0.04
SYPL1-201ENST00000011473 TGFB2P61812 414 aa15.29■□□□□ 0.04
SYPL1-201ENST00000011473 C2CD5Q86YS7 1000 aa15.29■□□□□ 0.04
SYPL1-201ENST00000011473 PELP1Q8IZL8 1130 aaKnown RBP15.29■□□□□ 0.04
SYPL1-201ENST00000011473 CLUAP1Q96AJ1 413 aa15.29■□□□□ 0.04
SYPL1-201ENST00000011473 IBTKQ9P2D0 1353 aaPredicted RBP15.29■□□□□ 0.04
SYPL1-201ENST00000011473 GCKRQ14397 625 aa15.29■□□□□ 0.04
SYPL1-201ENST00000011473 RCAN3Q9UKA8 241 aa15.29■□□□□ 0.04
SYPL1-201ENST00000011473 TRIM27P14373 513 aa15.28■□□□□ 0.04
SYPL1-201ENST00000011473 ZBTB38Q8NAP3 1195 aaPredicted RBP15.28■□□□□ 0.04
SYPL1-201ENST00000011473 TNRC6CQ9HCJ0 1690 aaKnown RBP15.28■□□□□ 0.04
SYPL1-201ENST00000011473 PDE6BP35913 854 aa15.28■□□□□ 0.04
SYPL1-201ENST00000011473 UBE3BQ7Z3V4 1068 aa15.28■□□□□ 0.04
SYPL1-201ENST00000011473 H0YIN7 160 aa15.27■□□□□ 0.04
SYPL1-201ENST00000011473 IRS4O14654 1257 aaPredicted RBP15.27■□□□□ 0.04
SYPL1-201ENST00000011473 ZNF622Q969S3 477 aaKnown RBP eCLIP15.27■□□□□ 0.04
SYPL1-201ENST00000011473 SRCIN1Q9C0H9 1055 aa15.27■□□□□ 0.04
SYPL1-201ENST00000011473 N4BP2Q86UW6 1770 aaPredicted RBP15.27■□□□□ 0.04
SYPL1-201ENST00000011473 ANKRD31Q8N7Z5 1873 aa15.27■□□□□ 0.03
SYPL1-201ENST00000011473 KIF13BQ9NQT8 1826 aa15.27■□□□□ 0.03
SYPL1-201ENST00000011473 ATF7IPQ6VMQ6 1270 aa15.26■□□□□ 0.03
SYPL1-201ENST00000011473 CACNA1FO60840 1977 aa15.26■□□□□ 0.03
SYPL1-201ENST00000011473 KIAA1551Q9HCM1 1747 aa15.26■□□□□ 0.03
SYPL1-201ENST00000011473 PLIN1O60240 522 aa15.26■□□□□ 0.03
SYPL1-201ENST00000011473 PCCAP05165 728 aaPredicted RBP15.26■□□□□ 0.03
SYPL1-201ENST00000011473 SRGNP10124 158 aa15.26■□□□□ 0.03
SYPL1-201ENST00000011473 NLRP3Q96P20 1036 aa15.26■□□□□ 0.03
SYPL1-201ENST00000011473 CCDC85AQ96PX6 553 aaPredicted RBP15.26■□□□□ 0.03
SYPL1-201ENST00000011473 API5Q9BZZ5 524 aaKnown RBP15.26■□□□□ 0.03
SYPL1-201ENST00000011473 YBX3P16989 372 aaKnown RBP eCLIP15.25■□□□□ 0.031e-7■□□□□ 9.9
SYPL1-201ENST00000011473 SLC10A5Q5PT55 438 aa15.25■□□□□ 0.03
SYPL1-201ENST00000011473 BCS1LQ9Y276 419 aa15.25■□□□□ 0.03
SYPL1-201ENST00000011473 RNF123Q5XPI4 1314 aa15.25■□□□□ 0.03
SYPL1-201ENST00000011473 KLRG2A4D1S0 409 aaPredicted RBP15.25■□□□□ 0.03
SYPL1-201ENST00000011473 ZKSCAN2Q63HK3 967 aa15.25■□□□□ 0.03
SYPL1-201ENST00000011473 ARHGAP45Q92619 1136 aa15.25■□□□□ 0.03
SYPL1-201ENST00000011473 COL11A2P13942 1736 aaPredicted RBP15.24■□□□□ 0.03
SYPL1-201ENST00000011473 IPO8O15397 1037 aaKnown RBP15.24■□□□□ 0.03
SYPL1-201ENST00000011473 NBPF7P0C2Y1 421 aaPredicted RBP15.24■□□□□ 0.03
SYPL1-201ENST00000011473 GPR162Q16538 588 aa15.24■□□□□ 0.03
SYPL1-201ENST00000011473 CRY2Q49AN0 593 aa15.24■□□□□ 0.03
SYPL1-201ENST00000011473 SLC51AQ86UW1 340 aa15.24■□□□□ 0.03
SYPL1-201ENST00000011473 C9orf78Q9NZ63 289 aaPredicted RBP15.24■□□□□ 0.03
SYPL1-201ENST00000011473 PIM2Q9P1W9 311 aa15.24■□□□□ 0.03
SYPL1-201ENST00000011473 ZNF219Q9P2Y4 722 aaPredicted RBP15.24■□□□□ 0.03
SYPL1-201ENST00000011473 H7C1W4 665 aa15.23■□□□□ 0.03
SYPL1-201ENST00000011473 GRM8O00222 908 aa15.23■□□□□ 0.03
SYPL1-201ENST00000011473 CASP7P55210 303 aa15.23■□□□□ 0.03
SYPL1-201ENST00000011473 ABCC4O15439 1325 aa15.23■□□□□ 0.03
SYPL1-201ENST00000011473 ALDH1L1O75891 902 aa15.23■□□□□ 0.03
SYPL1-201ENST00000011473 RLBP1P12271 317 aa15.23■□□□□ 0.03
SYPL1-201ENST00000011473 RPGRQ92834 1020 aaKnown RBP15.23■□□□□ 0.03
SYPL1-201ENST00000011473 MASTLQ96GX5 879 aa15.23■□□□□ 0.03
SYPL1-201ENST00000011473 NPR1P16066 1061 aa15.22■□□□□ 0.03
SYPL1-201ENST00000011473 DALRD3Q5D0E6 543 aaKnown RBP15.22■□□□□ 0.03
SYPL1-201ENST00000011473 TMEM57Q8N5G2 664 aa15.22■□□□□ 0.03
SYPL1-201ENST00000011473 TTLL6Q8N841 843 aa15.22■□□□□ 0.03
SYPL1-201ENST00000011473 RIC1Q4ADV7 1423 aa15.21■□□□□ 0.03
SYPL1-201ENST00000011473 CCT4P50991 539 aaKnown RBP15.21■□□□□ 0.03
SYPL1-201ENST00000011473 OLFM4Q6UX06 510 aa15.21■□□□□ 0.03
SYPL1-201ENST00000011473 FTSJ3Q8IY81 847 aaKnown RBP15.21■□□□□ 0.03
SYPL1-201ENST00000011473 PANK1Q8TE04 598 aa15.21■□□□□ 0.03
SYPL1-201ENST00000011473 USP44Q9H0E7 712 aa15.21■□□□□ 0.03
SYPL1-201ENST00000011473 CDHR2Q9BYE9 1310 aa15.21■□□□□ 0.03
SYPL1-201ENST00000011473 DDX60Q8IY21 1712 aaKnown RBP15.21■□□□□ 0.02
SYPL1-201ENST00000011473 PDE8AO60658 829 aa15.2■□□□□ 0.02
SYPL1-201ENST00000011473 STYK1Q6J9G0 422 aa15.2■□□□□ 0.02
SYPL1-201ENST00000011473 PRPF40BQ6NWY9 871 aaKnown RBP15.2■□□□□ 0.02
SYPL1-201ENST00000011473 EPHA10Q5JZY3 1008 aa15.2■□□□□ 0.02
SYPL1-201ENST00000011473 INTS3Q68E01 1043 aaKnown RBP15.2■□□□□ 0.02
SYPL1-201ENST00000011473 DZIP1LQ8IYY4 767 aaKnown RBP15.2■□□□□ 0.02
SYPL1-201ENST00000011473 C21orf2O43822 256 aa15.19■□□□□ 0.02
SYPL1-201ENST00000011473 CTSWP56202 376 aa15.19■□□□□ 0.02
SYPL1-201ENST00000011473 C20orf194Q5TEA3 1177 aa15.19■□□□□ 0.02
SYPL1-201ENST00000011473 SUCLG2Q96I99 432 aa15.19■□□□□ 0.02
SYPL1-201ENST00000011473 MEIS3Q99687 375 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms