RNA–Protein interactions for RNA: ENSMUST00000111043.8

Bdnf-203, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,839 nt, Biotype protein coding, Subcellular localisation Dendrite .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-203ENSMUST00000111043 Pank2Q3U4S0 443 aa8.97□□□□□ -0.97
Bdnf-203ENSMUST00000111043 Slfnl1Q8BHW9 410 aa8.97□□□□□ -0.97
Bdnf-203ENSMUST00000111043 DccP70211 1447 aa8.97□□□□□ -0.97
Bdnf-203ENSMUST00000111043 Bicdl1A0JNT9 577 aa8.96□□□□□ -0.97
Bdnf-203ENSMUST00000111043 Iqsec3Q3TES0 1195 aa8.96□□□□□ -0.97
Bdnf-203ENSMUST00000111043 Zbtb45Q52KG4 520 aa8.96□□□□□ -0.97
Bdnf-203ENSMUST00000111043 Sugp2Q8CH09 1067 aa8.96□□□□□ -0.97
Bdnf-203ENSMUST00000111043 Gys2Q8VCB3 704 aa8.96□□□□□ -0.97
Bdnf-203ENSMUST00000111043 Rbm27Q5SFM8 1060 aaKnown RBP8.96□□□□□ -0.98
Bdnf-203ENSMUST00000111043 Hmgn5Q9JL35 406 aa8.96□□□□□ -0.98
Bdnf-203ENSMUST00000111043 Tet3Q8BG87 1668 aa8.96□□□□□ -0.98
Bdnf-203ENSMUST00000111043 Abcc12Q80WJ6 1366 aa8.96□□□□□ -0.98
Bdnf-203ENSMUST00000111043 Anp32cQ64G17 123 aa8.96□□□□□ -0.98
Bdnf-203ENSMUST00000111043 Miga2Q8BK03 593 aa8.96□□□□□ -0.98
Bdnf-203ENSMUST00000111043 Nop14Q8R3N1 860 aaKnown RBP8.96□□□□□ -0.98
Bdnf-203ENSMUST00000111043 PdcQ9QW08 244 aa8.96□□□□□ -0.98
Bdnf-203ENSMUST00000111043 Cyp46a1Q9WVK8 500 aa8.96□□□□□ -0.98
Bdnf-203ENSMUST00000111043 Robo1O89026 1612 aa8.96□□□□□ -0.98
Bdnf-203ENSMUST00000111043 Rps6ka5Q8C050 863 aa8.95□□□□□ -0.98
Bdnf-203ENSMUST00000111043 Edc3Q8K2D3 508 aaKnown RBP8.95□□□□□ -0.98
Bdnf-203ENSMUST00000111043 Flad1Q8R123 492 aa8.95□□□□□ -0.98
Bdnf-203ENSMUST00000111043 Nip7Q9CXK8 180 aaKnown RBP8.95□□□□□ -0.98
Bdnf-203ENSMUST00000111043 Siglec1Q62230 1695 aa8.95□□□□□ -0.98
Bdnf-203ENSMUST00000111043 Slit1Q80TR4 1531 aa8.95□□□□□ -0.98
Bdnf-203ENSMUST00000111043 Tgfb1i1Q62219 461 aa8.95□□□□□ -0.98
Bdnf-203ENSMUST00000111043 Bend3Q6PAL0 825 aa8.95□□□□□ -0.98
Bdnf-203ENSMUST00000111043 Dhx30Q99PU8 1217 aaKnown RBP8.95□□□□□ -0.98
Bdnf-203ENSMUST00000111043 Sh3bp5Q9Z131 463 aa8.95□□□□□ -0.98
Bdnf-203ENSMUST00000111043 Pnpla7A2AJ88 1352 aa8.95□□□□□ -0.98
Bdnf-203ENSMUST00000111043 Soga3Q6NZL0 945 aa8.95□□□□□ -0.98
Bdnf-203ENSMUST00000111043 Zfp251Q6PCX8 632 aa8.95□□□□□ -0.98
Bdnf-203ENSMUST00000111043 Ankib1Q6ZPS6 1085 aa8.95□□□□□ -0.98
Bdnf-203ENSMUST00000111043 Sass6Q80UK7 654 aa8.95□□□□□ -0.98
Bdnf-203ENSMUST00000111043 Ankrd23Q812A3 306 aa8.95□□□□□ -0.98
Bdnf-203ENSMUST00000111043 CenppQ9CZ92 286 aa8.95□□□□□ -0.98
Bdnf-203ENSMUST00000111043 Nphp1Q9QY53 687 aa8.95□□□□□ -0.98
Bdnf-203ENSMUST00000111043 Zkscan2G3X952 960 aa8.94□□□□□ -0.98
Bdnf-203ENSMUST00000111043 CgnP59242 1191 aa8.94□□□□□ -0.98
Bdnf-203ENSMUST00000111043 Fez2Q6TYB5 348 aa8.94□□□□□ -0.98
Bdnf-203ENSMUST00000111043 Bcar3Q9QZK2 820 aa8.94□□□□□ -0.98
Bdnf-203ENSMUST00000111043 Hdac6Q9Z2V5 1149 aa8.94□□□□□ -0.98
Bdnf-203ENSMUST00000111043 Adcy9P51830 1353 aa8.94□□□□□ -0.98
Bdnf-203ENSMUST00000111043 Ssfa2Q922B9 1252 aa8.94□□□□□ -0.98
Bdnf-203ENSMUST00000111043 Chd1lQ9CXF7 900 aa8.94□□□□□ -0.98
Bdnf-203ENSMUST00000111043 Erbb4Q61527 1308 aa8.94□□□□□ -0.98
Bdnf-203ENSMUST00000111043 Dcaf5Q80T85 946 aa8.94□□□□□ -0.98
Bdnf-203ENSMUST00000111043 Med4Q9CQA5 270 aa8.94□□□□□ -0.98
Bdnf-203ENSMUST00000111043 Mrvi1Q9WUX5 899 aaKnown RBP8.94□□□□□ -0.98
Bdnf-203ENSMUST00000111043 AceP09470 1312 aa8.94□□□□□ -0.98
Bdnf-203ENSMUST00000111043 Zfp142G5E869 1843 aa8.94□□□□□ -0.98
Bdnf-203ENSMUST00000111043 Zscan25B2RX31 543 aa8.93□□□□□ -0.98
Bdnf-203ENSMUST00000111043 Zhx1P70121 873 aa8.93□□□□□ -0.98
Bdnf-203ENSMUST00000111043 Nap1l3Q794H2 544 aa8.93□□□□□ -0.98
Bdnf-203ENSMUST00000111043 Ints3Q7TPD0 1041 aaKnown RBP8.93□□□□□ -0.98
Bdnf-203ENSMUST00000111043 Kif2cQ922S8 721 aa8.93□□□□□ -0.98
Bdnf-203ENSMUST00000111043 Dync1i1O88485 628 aa8.93□□□□□ -0.98
Bdnf-203ENSMUST00000111043 AppP12023 770 aa8.93□□□□□ -0.98
Bdnf-203ENSMUST00000111043 Nucb2P81117 420 aa8.93□□□□□ -0.98
Bdnf-203ENSMUST00000111043 Adcy5P84309 1262 aa8.93□□□□□ -0.98
Bdnf-203ENSMUST00000111043 Pde3bQ61409 1100 aa8.93□□□□□ -0.98
Bdnf-203ENSMUST00000111043 Smc3Q9CW03 1217 aaKnown RBP8.93□□□□□ -0.98
Bdnf-203ENSMUST00000111043 Atg4a-psA0A0G2JFS9 396 aa8.93□□□□□ -0.98
Bdnf-203ENSMUST00000111043 Ets1P27577 440 aa8.93□□□□□ -0.98
Bdnf-203ENSMUST00000111043 Fkbp5Q64378 456 aa8.93□□□□□ -0.98
Bdnf-203ENSMUST00000111043 Atg4aQ8C9S8 396 aa8.93□□□□□ -0.98
Bdnf-203ENSMUST00000111043 Atg3Q9CPX6 314 aa8.93□□□□□ -0.98
Bdnf-203ENSMUST00000111043 Chmp3Q9CQ10 224 aa8.93□□□□□ -0.98
Bdnf-203ENSMUST00000111043 LratQ9JI60 231 aa8.93□□□□□ -0.98
Bdnf-203ENSMUST00000111043 Tns2Q8CGB6 1400 aa8.92□□□□□ -0.98
Bdnf-203ENSMUST00000111043 Tm6sf1P58749 370 aa8.92□□□□□ -0.98
Bdnf-203ENSMUST00000111043 Mrps27Q8BK72 415 aaKnown RBP8.92□□□□□ -0.98
Bdnf-203ENSMUST00000111043 R3hcc1Q8BSI6 488 aa8.92□□□□□ -0.98
Bdnf-203ENSMUST00000111043 Ttc19Q8CC21 365 aa8.92□□□□□ -0.98
Bdnf-203ENSMUST00000111043 Irx4Q9QY61 515 aa8.92□□□□□ -0.98
Bdnf-203ENSMUST00000111043 GpkowQ56A08 488 aa8.92□□□□□ -0.98
Bdnf-203ENSMUST00000111043 Nol12Q8BG17 217 aa8.92□□□□□ -0.98
Bdnf-203ENSMUST00000111043 Pm20d1Q8C165 503 aa8.92□□□□□ -0.98
Bdnf-203ENSMUST00000111043 Aldh1l2Q8K009 923 aa8.92□□□□□ -0.98
Bdnf-203ENSMUST00000111043 Ier5O89113 308 aa8.92□□□□□ -0.98
Bdnf-203ENSMUST00000111043 Hmox1P14901 289 aa8.92□□□□□ -0.98
Bdnf-203ENSMUST00000111043 Grm8P47743 908 aa8.92□□□□□ -0.98
Bdnf-203ENSMUST00000111043 Neurod6P48986 337 aa8.92□□□□□ -0.98
Bdnf-203ENSMUST00000111043 Mknk2Q8CDB0 459 aa8.92□□□□□ -0.98
Bdnf-203ENSMUST00000111043 Tmem119Q8R138 280 aa8.92□□□□□ -0.98
Bdnf-203ENSMUST00000111043 Trpm3Q5F4S9 1721 aa8.91□□□□□ -0.98
Bdnf-203ENSMUST00000111043 Ddit3P35639 168 aa8.91□□□□□ -0.98
Bdnf-203ENSMUST00000111043 Klc3Q91W40 508 aa8.91□□□□□ -0.98
Bdnf-203ENSMUST00000111043 Stk3Q9JI10 497 aa8.91□□□□□ -0.98
Bdnf-203ENSMUST00000111043 Sh3bgrQ9WUZ7 214 aa8.91□□□□□ -0.98
Bdnf-203ENSMUST00000111043 Atp8b2P98199 1209 aa8.91□□□□□ -0.98
Bdnf-203ENSMUST00000111043 Nucb1Q02819 459 aaKnown RBP8.91□□□□□ -0.98
Bdnf-203ENSMUST00000111043 Aldh8a1Q8BH00 487 aa8.91□□□□□ -0.98
Bdnf-203ENSMUST00000111043 Zbtb1Q91VL9 713 aa8.91□□□□□ -0.98
Bdnf-203ENSMUST00000111043 Chmp4cQ9D7F7 232 aa8.91□□□□□ -0.98
Bdnf-203ENSMUST00000111043 Tceal9Q9DD24 104 aa8.91□□□□□ -0.98
Bdnf-203ENSMUST00000111043 Adgrb1Q3UHD1 1582 aa8.91□□□□□ -0.98
Bdnf-203ENSMUST00000111043 Dhx38Q80X98 1228 aa8.91□□□□□ -0.98
Bdnf-203ENSMUST00000111043 Akap11E9Q777 1895 aa8.91□□□□□ -0.98
Bdnf-203ENSMUST00000111043 Gadd45bP22339 160 aa8.9□□□□□ -0.98
Bdnf-203ENSMUST00000111043 Gm12185Q5NCB2 835 aa8.9□□□□□ -0.98
Retrieved 100 of 22,080 RNA–protein pairs in 1184.2 ms