RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Tmc1Q8R4P5 757 aa26.02■■□□□ 1.76
Ccdc88a-202ENSMUST00000109477 Greb1lB9EJV3 1913 aa26.01■■□□□ 1.76
Ccdc88a-202ENSMUST00000109477 Myh1Q5SX40 1942 aa26.01■■□□□ 1.75
Ccdc88a-202ENSMUST00000109477 Col11a2Q64739 1736 aa26■■□□□ 1.75
Ccdc88a-202ENSMUST00000109477 Prl3d2F6R3P9 224 aa26■■□□□ 1.75
Ccdc88a-202ENSMUST00000109477 Cyp19a1P28649 503 aa26■■□□□ 1.75
Ccdc88a-202ENSMUST00000109477 SowahdQ8BY98 327 aa26■■□□□ 1.75
Ccdc88a-202ENSMUST00000109477 Tlr8P58682 1032 aa26■■□□□ 1.75
Ccdc88a-202ENSMUST00000109477 Msl1Q6PDM1 616 aa26■■□□□ 1.75
Ccdc88a-202ENSMUST00000109477 Q8C5K5 320 aa26■■□□□ 1.75
Ccdc88a-202ENSMUST00000109477 Trim34aQ99PP6 485 aa26■■□□□ 1.75
Ccdc88a-202ENSMUST00000109477 CenppQ9CZ92 286 aa26■■□□□ 1.75
Ccdc88a-202ENSMUST00000109477 Nek4Q9Z1J2 792 aa26■■□□□ 1.75
Ccdc88a-202ENSMUST00000109477 Plcb3P51432 1234 aaKnown RBP25.99■■□□□ 1.75
Ccdc88a-202ENSMUST00000109477 GptQ8QZR5 496 aa25.99■■□□□ 1.75
Ccdc88a-202ENSMUST00000109477 AtrnQ9WU60 1428 aa25.98■■□□□ 1.75
Ccdc88a-202ENSMUST00000109477 Prl3d3A0A0M6L0J6 224 aa25.97■■□□□ 1.75
Ccdc88a-202ENSMUST00000109477 Tbc1d9Q3UYK3 1264 aa25.97■■□□□ 1.75
Ccdc88a-202ENSMUST00000109477 Ubn2Q80WC1 1314 aa25.97■■□□□ 1.75
Ccdc88a-202ENSMUST00000109477 CanxP35564 591 aaKnown RBP25.97■■□□□ 1.75
Ccdc88a-202ENSMUST00000109477 Ifit1bl2Q3U687 466 aa25.97■■□□□ 1.75
Ccdc88a-202ENSMUST00000109477 Tbc1d32Q3URV1 1296 aa25.97■■□□□ 1.75
Ccdc88a-202ENSMUST00000109477 Nol10Q5RJG1 687 aaKnown RBP25.97■■□□□ 1.75
Ccdc88a-202ENSMUST00000109477 Cops6O88545 324 aa25.96■■□□□ 1.75
Ccdc88a-202ENSMUST00000109477 Igflr1Q3U4N7 345 aa25.96■■□□□ 1.75
Ccdc88a-202ENSMUST00000109477 Jarid2Q62315 1234 aa25.96■■□□□ 1.75
Ccdc88a-202ENSMUST00000109477 CpzQ8R4V4 654 aa25.96■■□□□ 1.75
Ccdc88a-202ENSMUST00000109477 Mfap1aC0HKD8 439 aaKnown RBP25.95■■□□□ 1.74
Ccdc88a-202ENSMUST00000109477 Mfap1bC0HKD9 439 aaKnown RBP25.95■■□□□ 1.74
Ccdc88a-202ENSMUST00000109477 Hmox1P14901 289 aa25.95■■□□□ 1.74
Ccdc88a-202ENSMUST00000109477 Ets1P27577 440 aa25.95■■□□□ 1.74
Ccdc88a-202ENSMUST00000109477 Nkx1-2P42580 305 aa25.95■■□□□ 1.74
Ccdc88a-202ENSMUST00000109477 Rbm27Q5SFM8 1060 aaKnown RBP25.95■■□□□ 1.74
Ccdc88a-202ENSMUST00000109477 NgdnQ9DB96 315 aaKnown RBP25.95■■□□□ 1.74
Ccdc88a-202ENSMUST00000109477 Plch1Q4KWH5 1682 aa25.95■■□□□ 1.74
Ccdc88a-202ENSMUST00000109477 Sned1Q70E20 1403 aa25.94■■□□□ 1.74
Ccdc88a-202ENSMUST00000109477 Anapc15-psA0A140T8L6 141 aa25.94■■□□□ 1.74
Ccdc88a-202ENSMUST00000109477 Hsp90ab1P11499 724 aaKnown RBP25.94■■□□□ 1.74
Ccdc88a-202ENSMUST00000109477 AppP12023 770 aa25.94■■□□□ 1.74
Ccdc88a-202ENSMUST00000109477 Tktl2Q9D4D4 627 aa25.94■■□□□ 1.74
Ccdc88a-202ENSMUST00000109477 Foxo4Q9WVH3 505 aa25.94■■□□□ 1.74
Ccdc88a-202ENSMUST00000109477 Ppp4r3aQ6P2K6 820 aa25.94■■□□□ 1.74
Ccdc88a-202ENSMUST00000109477 Tpx2A2APB8 745 aaKnown RBP25.93■■□□□ 1.74
Ccdc88a-202ENSMUST00000109477 Edc3Q8K2D3 508 aaKnown RBP25.93■■□□□ 1.74
Ccdc88a-202ENSMUST00000109477 Col23a1Q8K4G2 532 aa25.93■■□□□ 1.74
Ccdc88a-202ENSMUST00000109477 Sult6b1P0CC03 303 aa25.92■■□□□ 1.74
Ccdc88a-202ENSMUST00000109477 BcanQ61361 883 aa25.92■■□□□ 1.74
Ccdc88a-202ENSMUST00000109477 Rbm26Q6NZN0 1012 aaKnown RBP25.92■■□□□ 1.74
Ccdc88a-202ENSMUST00000109477 ErfeQ6PGN1 340 aa25.92■■□□□ 1.74
Ccdc88a-202ENSMUST00000109477 Chrna2Q91X60 512 aa25.92■■□□□ 1.74
Ccdc88a-202ENSMUST00000109477 Sf3a1Q8K4Z5 791 aaKnown RBP25.91■■□□□ 1.74
Ccdc88a-202ENSMUST00000109477 Zbtb38Q3LR78 1197 aa25.91■■□□□ 1.74
Ccdc88a-202ENSMUST00000109477 Susd4Q8BH32 490 aa25.91■■□□□ 1.74
Ccdc88a-202ENSMUST00000109477 Noc3lQ8VI84 807 aaKnown RBP25.91■■□□□ 1.74
Ccdc88a-202ENSMUST00000109477 Prom2Q3UUY6 835 aa25.9■■□□□ 1.74
Ccdc88a-202ENSMUST00000109477 Dhx38Q80X98 1228 aa25.9■■□□□ 1.74
Ccdc88a-202ENSMUST00000109477 RestQ8VIG1 1082 aa25.9■■□□□ 1.74
Ccdc88a-202ENSMUST00000109477 Chmp3Q9CQ10 224 aa25.9■■□□□ 1.74
Ccdc88a-202ENSMUST00000109477 IncenpQ9WU62 880 aa25.9■■□□□ 1.74
Ccdc88a-202ENSMUST00000109477 Mapk8ip1Q9WVI9 707 aa25.9■■□□□ 1.74
Ccdc88a-202ENSMUST00000109477 Cyp2c23E9Q5K4 494 aa25.89■■□□□ 1.74
Ccdc88a-202ENSMUST00000109477 Trim34bJ3QNR8 485 aa25.89■■□□□ 1.74
Ccdc88a-202ENSMUST00000109477 Pdia3P27773 505 aaKnown RBP25.89■■□□□ 1.74
Ccdc88a-202ENSMUST00000109477 Nlrp1aQ2LKU9 1182 aa25.89■■□□□ 1.74
Ccdc88a-202ENSMUST00000109477 Cyp7a1Q64505 503 aa25.89■■□□□ 1.74
Ccdc88a-202ENSMUST00000109477 Q9D2X8 372 aa25.89■■□□□ 1.74
Ccdc88a-202ENSMUST00000109477 Trpc5Q9QX29 975 aa25.89■■□□□ 1.74
Ccdc88a-202ENSMUST00000109477 Dctn1O08788 1281 aa25.88■■□□□ 1.73
Ccdc88a-202ENSMUST00000109477 Rtkn2Q14B46 604 aa25.88■■□□□ 1.73
Ccdc88a-202ENSMUST00000109477 1810065E05RikQ5NC41 235 aa25.88■■□□□ 1.73
Ccdc88a-202ENSMUST00000109477 Erc2Q6PH08 957 aa25.88■■□□□ 1.73
Ccdc88a-202ENSMUST00000109477 Dis3l2Q8CI75 870 aaKnown RBP25.88■■□□□ 1.73
Ccdc88a-202ENSMUST00000109477 Emilin1Q99K41 1017 aa25.88■■□□□ 1.73
Ccdc88a-202ENSMUST00000109477 Eif2s2Q99L45 331 aaKnown RBP25.88■■□□□ 1.73
Ccdc88a-202ENSMUST00000109477 Bag3Q9JLV1 577 aaKnown RBP25.88■■□□□ 1.73
Ccdc88a-202ENSMUST00000109477 Ildr2B5TVM2 661 aa25.88■■□□□ 1.73
Ccdc88a-202ENSMUST00000109477 Zc3h12cQ5DTV4 884 aa25.88■■□□□ 1.73
Ccdc88a-202ENSMUST00000109477 Slc26a8Q8R0C3 999 aa25.88■■□□□ 1.73
Ccdc88a-202ENSMUST00000109477 LratQ9JI60 231 aa25.88■■□□□ 1.73
Ccdc88a-202ENSMUST00000109477 Eya2O08575 532 aa25.87■■□□□ 1.73
Ccdc88a-202ENSMUST00000109477 Npy5rO70342 466 aa25.87■■□□□ 1.73
Ccdc88a-202ENSMUST00000109477 Atg9aQ68FE2 551 aa25.87■■□□□ 1.73
Ccdc88a-202ENSMUST00000109477 Ciao1Q99KN2 339 aa25.87■■□□□ 1.73
Ccdc88a-202ENSMUST00000109477 Fam228bQ497Q6 232 aa25.86■■□□□ 1.73
Ccdc88a-202ENSMUST00000109477 Tmc2Q8R4P4 888 aa25.86■■□□□ 1.73
Ccdc88a-202ENSMUST00000109477 Ipo9Q91YE6 1041 aa25.86■■□□□ 1.73
Ccdc88a-202ENSMUST00000109477 Stox1B2RQL2 990 aa25.85■■□□□ 1.73
Ccdc88a-202ENSMUST00000109477 Neurod6P48986 337 aa25.85■■□□□ 1.73
Ccdc88a-202ENSMUST00000109477 Taf5lQ91WQ5 589 aa25.85■■□□□ 1.73
Ccdc88a-202ENSMUST00000109477 Ppp6r3Q922D4 844 aa25.85■■□□□ 1.73
Ccdc88a-202ENSMUST00000109477 Mybbp1aQ7TPV4 1344 aaKnown RBP25.85■■□□□ 1.73
Ccdc88a-202ENSMUST00000109477 Nucb1Q02819 459 aaKnown RBP25.85■■□□□ 1.73
Ccdc88a-202ENSMUST00000109477 Ppm1gQ61074 542 aa25.85■■□□□ 1.73
Ccdc88a-202ENSMUST00000109477 Tbc1d4Q8BYJ6 1307 aa25.85■■□□□ 1.73
Ccdc88a-202ENSMUST00000109477 Gimap8Q75N62 688 aa25.84■■□□□ 1.73
Ccdc88a-202ENSMUST00000109477 Rtn4Q99P72 1162 aaKnown RBP25.84■■□□□ 1.73
Ccdc88a-202ENSMUST00000109477 Ttc14Q9CSP9 761 aa25.84■■□□□ 1.73
Ccdc88a-202ENSMUST00000109477 Rrs1Q9CYH6 365 aaKnown RBP25.84■■□□□ 1.73
Ccdc88a-202ENSMUST00000109477 CltaO08585 235 aa25.83■■□□□ 1.73
Ccdc88a-202ENSMUST00000109477 4930504O13RikQ8C5Z9 145 aa25.83■■□□□ 1.73
Retrieved 100 of 22,080 RNA–protein pairs in 115 ms