RNA–Protein interactions for RNA: ENSMUST00000066432.11

Scn3a-201, Transcript of Sodium channel protein, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Scn3a, Length 9,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3a-201ENSMUST00000066432 Gm44503E9PYU5 387 aa8.41□□□□□ -1.06
Scn3a-201ENSMUST00000066432 Fam213aQ9CYH2 218 aa8.4□□□□□ -1.06
Scn3a-201ENSMUST00000066432 Syce1Q9D495 329 aa8.4□□□□□ -1.06
Scn3a-201ENSMUST00000066432 Cep63Q3UPP8 700 aa8.4□□□□□ -1.06
Scn3a-201ENSMUST00000066432 Sh3tc1G3X9F6 1346 aa8.4□□□□□ -1.06
Scn3a-201ENSMUST00000066432 Soga3Q6NZL0 945 aa8.4□□□□□ -1.06
Scn3a-201ENSMUST00000066432 TrdnE9Q9K5 693 aa8.4□□□□□ -1.06
Scn3a-201ENSMUST00000066432 Slc17a8Q8BFU8 601 aa8.4□□□□□ -1.06
Scn3a-201ENSMUST00000066432 Grm8P47743 908 aa8.4□□□□□ -1.06
Scn3a-201ENSMUST00000066432 AdnpQ9Z103 1108 aaKnown RBP8.4□□□□□ -1.06
Scn3a-201ENSMUST00000066432 Clul1Q3ZRW6 464 aa8.4□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Ddx46Q569Z5 1032 aaKnown RBP8.4□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Ccne1Q61457 408 aa8.4□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Tex2Q6ZPJ0 1128 aaKnown RBP8.4□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Slc12a5Q91V14 1138 aa8.4□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Lzts2Q91YU6 671 aa8.4□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Bloc1s2Q9CWG9 143 aa8.4□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Ehbp1Q69ZW3 1231 aa8.4□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Ddx54Q8K4L0 874 aaKnown RBP8.4□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Aox1O54754 1333 aa8.4□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Eif5P59325 429 aaKnown RBP8.39□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Dzip1Q8BMD2 852 aa8.39□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Spag5Q7TME2 1165 aa8.39□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Slu7Q8BHJ9 585 aa8.39□□□□□ -1.07
Scn3a-201ENSMUST00000066432 SnrkQ8VDU5 748 aa8.39□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Gemin5Q8BX17 1502 aaKnown RBP8.39□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Q3UPC7 1272 aa8.39□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Pafah1b1P63005 410 aaKnown RBP8.39□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Spty2d1Q68FG3 682 aa8.39□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Erlin1Q91X78 346 aa8.39□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Chd4Q6PDQ2 1915 aaKnown RBP8.39□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Cep89Q9CZX2 791 aa8.39□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Tpcn1Q9EQJ0 817 aa8.39□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Tulp4Q9JIL5 1547 aa8.39□□□□□ -1.07
Scn3a-201ENSMUST00000066432 CltcQ68FD5 1675 aaKnown RBP8.39□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Tbc1d8bA3KGB4 1114 aa8.39□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Abcd1P48410 736 aa8.39□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Naa15Q80UM3 865 aaKnown RBP8.39□□□□□ -1.07
Scn3a-201ENSMUST00000066432 ParvgQ9ERD8 331 aa8.39□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Cyp2ab1S4R196 498 aa8.39□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Plcd3Q8K2J0 785 aa8.39□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Efhd1Q9D4J1 240 aa8.39□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Epb41l3Q9WV92 929 aa8.39□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Usp32F8VPZ3 1604 aa8.38□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Igsf1Q7TQA1 1317 aa8.38□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Gjb2Q00977 226 aa8.38□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Commd10Q8JZY2 202 aa8.38□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Iqca1Q9CUL5 857 aa8.38□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Kidins220E9Q9B7 1793 aa8.38□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Kif5bQ61768 963 aa8.38□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Smco2Q9DA21 347 aa8.38□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Akap2O54931 893 aa8.38□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Xrcc4Q924T3 326 aa8.38□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Ggnbp2Q5SV77 696 aa8.38□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Srgap1Q91Z69 1062 aa8.38□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Abca6Q8K441 1624 aa8.38□□□□□ -1.07
Scn3a-201ENSMUST00000066432 MaddQ80U28 1577 aa8.38□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Aox4Q3TYQ9 1336 aa8.38□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Trap1aP19473 224 aa8.38□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Gtf2f1Q3THK3 508 aaKnown RBP8.38□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Atp2b4Q6Q477 1205 aa8.38□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Gps2Q921N8 327 aa8.38□□□□□ -1.07
Scn3a-201ENSMUST00000066432 PplQ9R269 1755 aa8.38□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Ttc37F8VPK0 1563 aa8.38□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Tacc1Q6Y685 774 aa8.38□□□□□ -1.07
Scn3a-201ENSMUST00000066432 BrapQ99MP8 591 aa8.38□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Ktn1Q61595 1327 aaKnown RBP8.37□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Gm10093D3YYI8 482 aa8.37□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Hdac1O09106 482 aaKnown RBP8.37□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Card10P58660 1021 aa8.37□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Cfap157Q0VFX2 523 aa8.37□□□□□ -1.07
Scn3a-201ENSMUST00000066432 ShprhQ7TPQ3 1674 aa8.37□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Ncoa4Q5U4H9 625 aa8.37□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Tmem67Q8BR76 992 aa8.37□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Prdm11A2AGX3 565 aa8.37□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Shtn1Q8K2Q9 631 aa8.37□□□□□ -1.07
Scn3a-201ENSMUST00000066432 GckrQ91X44 587 aa8.37□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Zfp853A0A1D5RM95 733 aa8.37□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Tagap1P0CAX8 505 aa8.37□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Kiaa1211Q5PR69 1207 aa8.37□□□□□ -1.07
Scn3a-201ENSMUST00000066432 HellsQ60848 821 aa8.37□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Fgfr1opQ66JX5 399 aa8.37□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Cdk12Q14AX6 1484 aaKnown RBP8.37□□□□□ -1.07
Scn3a-201ENSMUST00000066432 A0A1W2P7S8 802 aa8.37□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Cdc5lQ6A068 802 aaKnown RBP8.37□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Tubb2aQ7TMM9 445 aa8.37□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Tubb2bQ9CWF2 445 aa8.37□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Myo3bQ1EG27 1305 aa8.37□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Mcmdc2E9Q956 681 aa8.37□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Bcl2l13P59017 434 aa8.37□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Atp8b2P98199 1209 aa8.37□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Nap1l1P28656 391 aaKnown RBP8.36□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Ift74Q8BKE9 600 aa8.36□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Hdac9Q99N13 588 aa8.36□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Fam114a1Q9D281 569 aa8.36□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Knop1Q9Z2Q2 478 aaKnown RBP8.36□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Larp1bA0A0A6YXJ7 370 aaKnown RBP8.36□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Ppp1r21Q3TDD9 780 aa8.36□□□□□ -1.07
Scn3a-201ENSMUST00000066432 AatkQ80YE4 1365 aa8.36□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Ell2Q3UKU1 639 aa8.36□□□□□ -1.07
Retrieved 100 of 22,080 RNA–protein pairs in 39.4 ms