RNA–Protein interactions for RNA: ENSMUST00000032168.6

Sec61a1-201, Transcript of Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sec61a1, Length 3,172 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1-201ENSMUST00000032168 St18Q80TY4 1045 aa20.32■□□□□ 0.84
Sec61a1-201ENSMUST00000032168 Timm10P62073 90 aa20.31■□□□□ 0.84
Sec61a1-201ENSMUST00000032168 Tmem87bQ8BKU8 555 aa20.31■□□□□ 0.84
Sec61a1-201ENSMUST00000032168 Ank1Q02357 1862 aa20.31■□□□□ 0.84
Sec61a1-201ENSMUST00000032168 Ddx46Q569Z5 1032 aaKnown RBP20.31■□□□□ 0.84
Sec61a1-201ENSMUST00000032168 Smg7Q5RJH6 1138 aaKnown RBP20.31■□□□□ 0.84
Sec61a1-201ENSMUST00000032168 Ttc19Q8CC21 365 aa20.3■□□□□ 0.84
Sec61a1-201ENSMUST00000032168 Gm9992B2RWK3 458 aa20.3■□□□□ 0.84
Sec61a1-201ENSMUST00000032168 Pkp1P97350 728 aaKnown RBP20.3■□□□□ 0.84
Sec61a1-201ENSMUST00000032168 Unc93aQ710D3 458 aa20.3■□□□□ 0.84
Sec61a1-201ENSMUST00000032168 Cwc25Q9DBF7 416 aa20.3■□□□□ 0.84
Sec61a1-201ENSMUST00000032168 Tiam2Q6ZPF3 1715 aa20.3■□□□□ 0.84
Sec61a1-201ENSMUST00000032168 Rbbp8nlA2ABX0 614 aa20.3■□□□□ 0.84
Sec61a1-201ENSMUST00000032168 Smarce1O54941 411 aaKnown RBP20.3■□□□□ 0.84
Sec61a1-201ENSMUST00000032168 Atp6v1dP57746 247 aa20.3■□□□□ 0.84
Sec61a1-201ENSMUST00000032168 BcanQ61361 883 aa20.3■□□□□ 0.84
Sec61a1-201ENSMUST00000032168 Akap11E9Q777 1895 aa20.29■□□□□ 0.84
Sec61a1-201ENSMUST00000032168 Polr3dQ91WD1 398 aa20.29■□□□□ 0.84
Sec61a1-201ENSMUST00000032168 Stard3nlQ9DCI3 235 aa20.29■□□□□ 0.84
Sec61a1-201ENSMUST00000032168 AK157302I3ITR1 129 aa20.29■□□□□ 0.84
Sec61a1-201ENSMUST00000032168 Mrpl50Q8VDT9 159 aaKnown RBP20.29■□□□□ 0.84
Sec61a1-201ENSMUST00000032168 Isca1Q9D924 129 aa20.29■□□□□ 0.84
Sec61a1-201ENSMUST00000032168 Pus3Q9JI38 481 aa20.29■□□□□ 0.84
Sec61a1-201ENSMUST00000032168 Sult6b1P0CC03 303 aa20.28■□□□□ 0.84
Sec61a1-201ENSMUST00000032168 Gm12185Q5NCB2 835 aa20.28■□□□□ 0.84
Sec61a1-201ENSMUST00000032168 Strn4P58404 760 aa20.27■□□□□ 0.84
Sec61a1-201ENSMUST00000032168 Zfp804bA0A0G2JGH6 1343 aa20.27■□□□□ 0.84
Sec61a1-201ENSMUST00000032168 NpeppsQ11011 920 aa20.27■□□□□ 0.84
Sec61a1-201ENSMUST00000032168 Atg9aQ68FE2 551 aa20.27■□□□□ 0.84
Sec61a1-201ENSMUST00000032168 Q9D9S1 216 aa20.26■□□□□ 0.83
Sec61a1-201ENSMUST00000032168 Syt1P46096 421 aa20.26■□□□□ 0.83
Sec61a1-201ENSMUST00000032168 Ltv1Q6NSQ7 470 aaKnown RBP20.26■□□□□ 0.83
Sec61a1-201ENSMUST00000032168 Ubxn10Q8BG34 277 aa20.26■□□□□ 0.83
Sec61a1-201ENSMUST00000032168 Prl3d3A0A0M6L0J6 224 aa20.26■□□□□ 0.83
Sec61a1-201ENSMUST00000032168 Babam1Q3UI43 333 aa20.26■□□□□ 0.83
Sec61a1-201ENSMUST00000032168 Sgsm2Q80U12 1005 aa20.26■□□□□ 0.83
Sec61a1-201ENSMUST00000032168 Bms1Q6PGF5 1284 aaKnown RBP20.25■□□□□ 0.83
Sec61a1-201ENSMUST00000032168 Sytl4Q9R0Q1 673 aa20.25■□□□□ 0.83
Sec61a1-201ENSMUST00000032168 Tsr2Q8C8T8 191 aa20.24■□□□□ 0.83
Sec61a1-201ENSMUST00000032168 Crb1Q8VHS2 1405 aa20.24■□□□□ 0.83
Sec61a1-201ENSMUST00000032168 Pde3bQ61409 1100 aa20.24■□□□□ 0.83
Sec61a1-201ENSMUST00000032168 Kcnb2A6H8H5 907 aa20.24■□□□□ 0.83
Sec61a1-201ENSMUST00000032168 EappQ5BU09 281 aa20.24■□□□□ 0.83
Sec61a1-201ENSMUST00000032168 Ddx19aQ61655 478 aaKnown RBP20.24■□□□□ 0.83
Sec61a1-201ENSMUST00000032168 Golim4Q8BXA1 655 aa20.23■□□□□ 0.83
Sec61a1-201ENSMUST00000032168 GptQ8QZR5 496 aa20.23■□□□□ 0.83
Sec61a1-201ENSMUST00000032168 Ncoa5Q91W39 579 aaKnown RBP20.23■□□□□ 0.83
Sec61a1-201ENSMUST00000032168 Ccdc129Q14B48 1034 aa20.23■□□□□ 0.83
Sec61a1-201ENSMUST00000032168 Dmrt2Q8BG36 561 aa20.22■□□□□ 0.83
Sec61a1-201ENSMUST00000032168 Gimap5Q8BWF2 308 aa20.22■□□□□ 0.83
Sec61a1-201ENSMUST00000032168 Nip7Q9CXK8 180 aaKnown RBP20.22■□□□□ 0.83
Sec61a1-201ENSMUST00000032168 Usp48Q3V0C5 1052 aa20.22■□□□□ 0.83
Sec61a1-201ENSMUST00000032168 Sp8Q8BMJ8 486 aa20.22■□□□□ 0.83
Sec61a1-201ENSMUST00000032168 StrbpQ91WM1 672 aaKnown RBP20.22■□□□□ 0.83
Sec61a1-201ENSMUST00000032168 Smc3Q9CW03 1217 aaKnown RBP20.22■□□□□ 0.83
Sec61a1-201ENSMUST00000032168 Fam213aQ9CYH2 218 aa20.22■□□□□ 0.83
Sec61a1-201ENSMUST00000032168 ImpactO55091 318 aa20.22■□□□□ 0.83
Sec61a1-201ENSMUST00000032168 Naa30Q8CES0 364 aa20.22■□□□□ 0.83
Sec61a1-201ENSMUST00000032168 Tmc2Q8R4P4 888 aa20.22■□□□□ 0.83
Sec61a1-201ENSMUST00000032168 Anxa1P10107 346 aaKnown RBP20.21■□□□□ 0.83
Sec61a1-201ENSMUST00000032168 Rhot2Q8JZN7 620 aa20.21■□□□□ 0.83
Sec61a1-201ENSMUST00000032168 Syce3B5KM66 88 aa20.21■□□□□ 0.83
Sec61a1-201ENSMUST00000032168 Lmbrd2Q8C561 694 aa20.21■□□□□ 0.83
Sec61a1-201ENSMUST00000032168 DpydQ8CHR6 1025 aa20.21■□□□□ 0.83
Sec61a1-201ENSMUST00000032168 PtmsQ9D0J8 101 aaKnown RBP20.21■□□□□ 0.83
Sec61a1-201ENSMUST00000032168 Hdac6Q9Z2V5 1149 aa20.21■□□□□ 0.83
Sec61a1-201ENSMUST00000032168 Erbb4Q61527 1308 aa20.21■□□□□ 0.83
Sec61a1-201ENSMUST00000032168 Ercc3P49135 783 aa20.2■□□□□ 0.82
Sec61a1-201ENSMUST00000032168 Slfnl1Q8BHW9 410 aa20.2■□□□□ 0.82
Sec61a1-201ENSMUST00000032168 NfkbibQ60778 359 aa20.2■□□□□ 0.82
Sec61a1-201ENSMUST00000032168 Dcaf5Q80T85 946 aa20.2■□□□□ 0.82
Sec61a1-201ENSMUST00000032168 Sos2Q02384 1333 aa20.19■□□□□ 0.82
Sec61a1-201ENSMUST00000032168 Nphp3Q7TNH6 1325 aa20.19■□□□□ 0.82
Sec61a1-201ENSMUST00000032168 Cyp2d10P24456 504 aa20.19■□□□□ 0.82
Sec61a1-201ENSMUST00000032168 Nlrp1aQ2LKU9 1182 aa20.19■□□□□ 0.82
Sec61a1-201ENSMUST00000032168 Shank3Q4ACU6 1730 aa20.19■□□□□ 0.82
Sec61a1-201ENSMUST00000032168 Tnrc6cQ3UHC0 1690 aaKnown RBP20.18■□□□□ 0.82
Sec61a1-201ENSMUST00000032168 Plcd4Q8K3R3 807 aa20.18■□□□□ 0.82
Sec61a1-201ENSMUST00000032168 Stx6Q9JKK1 255 aa20.18■□□□□ 0.82
Sec61a1-201ENSMUST00000032168 Eya2O08575 532 aa20.18■□□□□ 0.82
Sec61a1-201ENSMUST00000032168 PtmaP26350 111 aa20.18■□□□□ 0.82
Sec61a1-201ENSMUST00000032168 Ppp4r3aQ6P2K6 820 aa20.18■□□□□ 0.82
Sec61a1-201ENSMUST00000032168 Atf7Q8R0S1 413 aa20.18■□□□□ 0.82
Sec61a1-201ENSMUST00000032168 Prl3d2F6R3P9 224 aa20.18■□□□□ 0.82
Sec61a1-201ENSMUST00000032168 Kank4Q6P9J5 1016 aa20.18■□□□□ 0.82
Sec61a1-201ENSMUST00000032168 4933402E13RikQ9D4D2 429 aa20.18■□□□□ 0.82
Sec61a1-201ENSMUST00000032168 4931400O07RikQ9D4M5 137 aa20.18■□□□□ 0.82
Sec61a1-201ENSMUST00000032168 Lrrfip2Q91WK0 415 aa20.17■□□□□ 0.82
Sec61a1-201ENSMUST00000032168 Smc4Q8CG47 1286 aa20.17■□□□□ 0.82
Sec61a1-201ENSMUST00000032168 Zbtb1Q91VL9 713 aa20.17■□□□□ 0.82
Sec61a1-201ENSMUST00000032168 Ehd4Q9EQP2 541 aa20.17■□□□□ 0.82
Sec61a1-201ENSMUST00000032168 Znf526Q8BI66 675 aa20.16■□□□□ 0.82
Sec61a1-201ENSMUST00000032168 Rassf8Q8CJ96 419 aa20.16■□□□□ 0.82
Sec61a1-201ENSMUST00000032168 Bcl11bQ99PV8 884 aa20.16■□□□□ 0.82
Sec61a1-201ENSMUST00000032168 Cyp19a1P28649 503 aa20.16■□□□□ 0.82
Sec61a1-201ENSMUST00000032168 Clca2Q8BG22 942 aa20.16■□□□□ 0.82
Sec61a1-201ENSMUST00000032168 Mb21d2Q8C525 428 aa20.16■□□□□ 0.82
Sec61a1-201ENSMUST00000032168 Slc4a1P04919 929 aa20.16■□□□□ 0.82
Sec61a1-201ENSMUST00000032168 Sik1Q60670 779 aa20.16■□□□□ 0.82
Sec61a1-201ENSMUST00000032168 Gigyf1Q99MR1 1044 aaKnown RBP20.16■□□□□ 0.82
Retrieved 100 of 22,080 RNA–protein pairs in 44.3 ms