RNA–Protein interactions for RNA: ENSMUST00000022646.8

Nkx3-1-201, Transcript of Homeobox protein Nkx-3.1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nkx3-1, Length 3,195 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1-201ENSMUST00000022646 Ripor2Q80U16 1078 aa17.97■□□□□ 0.47
Nkx3-1-201ENSMUST00000022646 Tjp1P39447 1745 aaKnown RBP17.96■□□□□ 0.47
Nkx3-1-201ENSMUST00000022646 DbnlQ62418 436 aa17.96■□□□□ 0.47
Nkx3-1-201ENSMUST00000022646 Dhx38Q80X98 1228 aa17.96■□□□□ 0.47
Nkx3-1-201ENSMUST00000022646 Psma5Q9Z2U1 241 aaKnown RBP17.96■□□□□ 0.47
Nkx3-1-201ENSMUST00000022646 Shank2Q80Z38 1476 aa17.96■□□□□ 0.47
Nkx3-1-201ENSMUST00000022646 Rnf20Q5DTM8 973 aa17.96■□□□□ 0.47
Nkx3-1-201ENSMUST00000022646 Atf3Q60765 181 aa17.96■□□□□ 0.47
Nkx3-1-201ENSMUST00000022646 Sp8Q8BMJ8 486 aa17.96■□□□□ 0.47
Nkx3-1-201ENSMUST00000022646 Med4Q9CQA5 270 aa17.96■□□□□ 0.47
Nkx3-1-201ENSMUST00000022646 Soga3Q6NZL0 945 aa17.95■□□□□ 0.46
Nkx3-1-201ENSMUST00000022646 Zscan22Q8BGS5 496 aa17.95■□□□□ 0.46
Nkx3-1-201ENSMUST00000022646 Q8C5K5 320 aa17.95■□□□□ 0.46
Nkx3-1-201ENSMUST00000022646 AceP09470 1312 aa17.95■□□□□ 0.46
Nkx3-1-201ENSMUST00000022646 Wnk3Q80XP9 1757 aa17.95■□□□□ 0.46
Nkx3-1-201ENSMUST00000022646 Eef2kO08796 724 aa17.95■□□□□ 0.46
Nkx3-1-201ENSMUST00000022646 Becn1O88597 448 aa17.95■□□□□ 0.46
Nkx3-1-201ENSMUST00000022646 Ccdc66Q6NS45 935 aa17.95■□□□□ 0.46
Nkx3-1-201ENSMUST00000022646 Tmem87bQ8BKU8 555 aa17.95■□□□□ 0.46
Nkx3-1-201ENSMUST00000022646 Zbtb22Q9Z0G7 638 aa17.95■□□□□ 0.46
Nkx3-1-201ENSMUST00000022646 Cd22P35329 862 aa17.95■□□□□ 0.46
Nkx3-1-201ENSMUST00000022646 Clcn1Q64347 994 aa17.95■□□□□ 0.46
Nkx3-1-201ENSMUST00000022646 NaspQ99MD9 773 aaKnown RBP17.95■□□□□ 0.46
Nkx3-1-201ENSMUST00000022646 Tnks1bp1P58871 1720 aa17.95■□□□□ 0.46
Nkx3-1-201ENSMUST00000022646 Tbc1d30Q69ZT9 766 aa17.94■□□□□ 0.46
Nkx3-1-201ENSMUST00000022646 4930572O03RikQ8C5Y0 211 aa17.94■□□□□ 0.46
Nkx3-1-201ENSMUST00000022646 Rbbp8nlA2ABX0 614 aa17.93■□□□□ 0.46
Nkx3-1-201ENSMUST00000022646 AppP12023 770 aa17.93■□□□□ 0.46
Nkx3-1-201ENSMUST00000022646 Fkbp5Q64378 456 aa17.93■□□□□ 0.46
Nkx3-1-201ENSMUST00000022646 Rps6kb1Q8BSK8 525 aa17.93■□□□□ 0.46
Nkx3-1-201ENSMUST00000022646 Efcab2Q9CQ46 164 aa17.93■□□□□ 0.46
Nkx3-1-201ENSMUST00000022646 LratQ9JI60 231 aa17.93■□□□□ 0.46
Nkx3-1-201ENSMUST00000022646 Dis3l2Q8CI75 870 aaKnown RBP17.93■□□□□ 0.46
Nkx3-1-201ENSMUST00000022646 Fam184aE9PW83 1143 aa17.93■□□□□ 0.46
Nkx3-1-201ENSMUST00000022646 Pcdh10E9PXQ7 1057 aa17.93■□□□□ 0.46
Nkx3-1-201ENSMUST00000022646 Mcm3P25206 812 aaKnown RBP17.93■□□□□ 0.46
Nkx3-1-201ENSMUST00000022646 Zfp51Q3U4L8 781 aa17.93■□□□□ 0.46
Nkx3-1-201ENSMUST00000022646 RgmbQ7TQ33 436 aa17.93■□□□□ 0.46
Nkx3-1-201ENSMUST00000022646 Wdr24Q8CFJ9 790 aa17.93■□□□□ 0.46
Nkx3-1-201ENSMUST00000022646 StrbpQ91WM1 672 aaKnown RBP17.93■□□□□ 0.46
Nkx3-1-201ENSMUST00000022646 Ankle2Q6P1H6 964 aa17.92■□□□□ 0.46
Nkx3-1-201ENSMUST00000022646 Gm21663A0A0G2JE01 267 aa17.92■□□□□ 0.46
Nkx3-1-201ENSMUST00000022646 Gm7361D3Z6R1 267 aa17.92■□□□□ 0.46
Nkx3-1-201ENSMUST00000022646 5031410I06RikE9Q4E0 267 aa17.92■□□□□ 0.46
Nkx3-1-201ENSMUST00000022646 Gm1979E9QAN3 267 aa17.92■□□□□ 0.46
Nkx3-1-201ENSMUST00000022646 Gm5862K7N5V5 267 aa17.92■□□□□ 0.46
Nkx3-1-201ENSMUST00000022646 Gm10220K7N660 267 aa17.92■□□□□ 0.46
Nkx3-1-201ENSMUST00000022646 Gnat3Q3V3I2 354 aa17.92■□□□□ 0.46
Nkx3-1-201ENSMUST00000022646 Tbc1d4Q8BYJ6 1307 aa17.91■□□□□ 0.46
Nkx3-1-201ENSMUST00000022646 FanccP50652 591 aa17.91■□□□□ 0.46
Nkx3-1-201ENSMUST00000022646 Vps54Q5SPW0 977 aa17.91■□□□□ 0.46
Nkx3-1-201ENSMUST00000022646 Ddx58Q6Q899 926 aa17.91■□□□□ 0.46
Nkx3-1-201ENSMUST00000022646 Nup88Q8CEC0 753 aaKnown RBP17.91■□□□□ 0.46
Nkx3-1-201ENSMUST00000022646 Eif3bQ8JZQ9 803 aaKnown RBP17.91■□□□□ 0.46
Nkx3-1-201ENSMUST00000022646 Speer4bQ9D9F7 267 aa17.91■□□□□ 0.46
Nkx3-1-201ENSMUST00000022646 Ubr2Q6WKZ8 1755 aa17.91■□□□□ 0.46
Nkx3-1-201ENSMUST00000022646 Zfp113Q8C689 439 aa17.91■□□□□ 0.46
Nkx3-1-201ENSMUST00000022646 Ssfa2Q922B9 1252 aa17.91■□□□□ 0.46
Nkx3-1-201ENSMUST00000022646 PhaxQ9JJT9 385 aaKnown RBP17.91■□□□□ 0.46
Nkx3-1-201ENSMUST00000022646 Igbp1bQ9QZ29 343 aa17.91■□□□□ 0.46
Nkx3-1-201ENSMUST00000022646 Ccdc173A0JLY1 547 aa17.91■□□□□ 0.46
Nkx3-1-201ENSMUST00000022646 Slc5a1Q8C3K6 665 aa17.91■□□□□ 0.46
Nkx3-1-201ENSMUST00000022646 Erbb4Q61527 1308 aa17.9■□□□□ 0.46
Nkx3-1-201ENSMUST00000022646 Nap1l3Q794H2 544 aa17.9■□□□□ 0.46
Nkx3-1-201ENSMUST00000022646 Pnma3Q8JZW8 466 aa17.9■□□□□ 0.46
Nkx3-1-201ENSMUST00000022646 Bloc1s2Q9CWG9 143 aa17.9■□□□□ 0.46
Nkx3-1-201ENSMUST00000022646 Aox1O54754 1333 aa17.9■□□□□ 0.46
Nkx3-1-201ENSMUST00000022646 Tpm2P58774 284 aa17.9■□□□□ 0.46
Nkx3-1-201ENSMUST00000022646 Cnnm3Q32NY4 713 aa17.9■□□□□ 0.46
Nkx3-1-201ENSMUST00000022646 Leo1Q5XJE5 667 aa17.9■□□□□ 0.46
Nkx3-1-201ENSMUST00000022646 SrrtQ99MR6 875 aaKnown RBP17.9■□□□□ 0.46
Nkx3-1-201ENSMUST00000022646 Hmg20bQ9Z104 317 aa17.9■□□□□ 0.46
Nkx3-1-201ENSMUST00000022646 RubcnlQ3TD16 648 aa17.89■□□□□ 0.46
Nkx3-1-201ENSMUST00000022646 Gzf1Q4VBD9 706 aa17.89■□□□□ 0.46
Nkx3-1-201ENSMUST00000022646 Ddx46Q569Z5 1032 aaKnown RBP17.89■□□□□ 0.46
Nkx3-1-201ENSMUST00000022646 Anp32cQ64G17 123 aa17.89■□□□□ 0.46
Nkx3-1-201ENSMUST00000022646 Flad1Q8R123 492 aa17.89■□□□□ 0.46
Nkx3-1-201ENSMUST00000022646 Syde2E9PUP1 1314 aa17.89■□□□□ 0.45
Nkx3-1-201ENSMUST00000022646 CgnP59242 1191 aa17.89■□□□□ 0.45
Nkx3-1-201ENSMUST00000022646 Esyt1Q3U7R1 1092 aaKnown RBP17.89■□□□□ 0.45
Nkx3-1-201ENSMUST00000022646 Mindy4Q3UQI9 744 aa17.89■□□□□ 0.45
Nkx3-1-201ENSMUST00000022646 Utp3Q9JI13 469 aaKnown RBP17.89■□□□□ 0.45
Nkx3-1-201ENSMUST00000022646 Ppp6r1Q7TSI3 856 aa17.88■□□□□ 0.45
Nkx3-1-201ENSMUST00000022646 Nek11Q8C0Q4 628 aa17.88■□□□□ 0.45
Nkx3-1-201ENSMUST00000022646 Cep57l1Q8VDS7 400 aa17.88■□□□□ 0.45
Nkx3-1-201ENSMUST00000022646 Phlpp1Q8CHE4 1687 aa17.88■□□□□ 0.45
Nkx3-1-201ENSMUST00000022646 Slit1Q80TR4 1531 aa17.88■□□□□ 0.45
Nkx3-1-201ENSMUST00000022646 Me3Q8BMF3 604 aa17.88■□□□□ 0.45
Nkx3-1-201ENSMUST00000022646 Cfap73J3QPZ5 306 aa17.87■□□□□ 0.45
Nkx3-1-201ENSMUST00000022646 Adcy5P84309 1262 aa17.87■□□□□ 0.45
Nkx3-1-201ENSMUST00000022646 Kank4Q6P9J5 1016 aa17.87■□□□□ 0.45
Nkx3-1-201ENSMUST00000022646 Zbtb40Q6PCS8 1258 aa17.87■□□□□ 0.45
Nkx3-1-201ENSMUST00000022646 Ctdnep1Q3TP92 244 aa17.87■□□□□ 0.45
Nkx3-1-201ENSMUST00000022646 Spata31d1bE9QA57 1361 aa17.87■□□□□ 0.45
Nkx3-1-201ENSMUST00000022646 Mknk2Q8CDB0 459 aa17.86■□□□□ 0.45
Nkx3-1-201ENSMUST00000022646 FocadA2AKG8 1798 aa17.86■□□□□ 0.45
Nkx3-1-201ENSMUST00000022646 Bach2P97303 839 aa17.86■□□□□ 0.45
Nkx3-1-201ENSMUST00000022646 Lrrfip2Q91WK0 415 aa17.86■□□□□ 0.45
Nkx3-1-201ENSMUST00000022646 Rrs1Q9CYH6 365 aaKnown RBP17.86■□□□□ 0.45
Nkx3-1-201ENSMUST00000022646 Ndufa8Q9DCJ5 172 aa17.86■□□□□ 0.45
Retrieved 100 of 22,080 RNA–protein pairs in 18.5 ms