RNA–Protein interactions for RNA: ENSMUST00000019649.3

Ubb-201, Transcript of Polyubiquitin-B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubb, Length 1,499 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubb-201ENSMUST00000019649 Fam213aQ9CYH2 218 aa20.18■□□□□ 0.82
Ubb-201ENSMUST00000019649 NmiO35309 314 aa20.18■□□□□ 0.82
Ubb-201ENSMUST00000019649 NogP97466 232 aa20.18■□□□□ 0.82
Ubb-201ENSMUST00000019649 Adgre1Q61549 931 aa20.18■□□□□ 0.82
Ubb-201ENSMUST00000019649 Ripor2Q80U16 1078 aa20.18■□□□□ 0.82
Ubb-201ENSMUST00000019649 Rbm17Q8JZX4 405 aaKnown RBP20.18■□□□□ 0.82
Ubb-201ENSMUST00000019649 Ttc41Q692V3 1318 aa20.17■□□□□ 0.82
Ubb-201ENSMUST00000019649 CanxP35564 591 aaKnown RBP20.17■□□□□ 0.82
Ubb-201ENSMUST00000019649 Igflr1Q3U4N7 345 aa20.17■□□□□ 0.82
Ubb-201ENSMUST00000019649 Eif4g2Q62448 906 aaKnown RBP20.17■□□□□ 0.82
Ubb-201ENSMUST00000019649 Cyp7a1Q64505 503 aa20.17■□□□□ 0.82
Ubb-201ENSMUST00000019649 Bend3Q6PAL0 825 aa20.17■□□□□ 0.82
Ubb-201ENSMUST00000019649 Ptcd1Q8C2E4 695 aaKnown RBP20.17■□□□□ 0.82
Ubb-201ENSMUST00000019649 Spire2Q8K1S6 718 aa20.17■□□□□ 0.82
Ubb-201ENSMUST00000019649 Ttc14Q9CSP9 761 aa20.17■□□□□ 0.82
Ubb-201ENSMUST00000019649 Gja10Q9WUS4 505 aa20.17■□□□□ 0.82
Ubb-201ENSMUST00000019649 Ttc5Q99LG4 440 aa20.16■□□□□ 0.82
Ubb-201ENSMUST00000019649 Golgb1E9PVZ8 3238 aa20.16■□□□□ 0.82
Ubb-201ENSMUST00000019649 Gm7347D3YYI9 267 aa20.15■□□□□ 0.82
Ubb-201ENSMUST00000019649 Speer4aF8VPX6 267 aa20.15■□□□□ 0.82
Ubb-201ENSMUST00000019649 Psd3Q2PFD7 1037 aa20.15■□□□□ 0.82
Ubb-201ENSMUST00000019649 Sf3b3Q921M3 1217 aaKnown RBP20.15■□□□□ 0.82
Ubb-201ENSMUST00000019649 Lmbr1lQ9D1E5 489 aa20.15■□□□□ 0.82
Ubb-201ENSMUST00000019649 Akap2O54931 893 aa20.14■□□□□ 0.81
Ubb-201ENSMUST00000019649 Dok7Q18PE0 504 aa20.14■□□□□ 0.81
Ubb-201ENSMUST00000019649 Ttc19Q8CC21 365 aa20.14■□□□□ 0.81
Ubb-201ENSMUST00000019649 Pik3ap1Q9EQ32 811 aa20.14■□□□□ 0.81
Ubb-201ENSMUST00000019649 Btaf1E9QAE3 1848 aa20.13■□□□□ 0.81
Ubb-201ENSMUST00000019649 Thrap3Q569Z6 951 aaKnown RBP20.13■□□□□ 0.81
Ubb-201ENSMUST00000019649 Ric3Q8BPM6 367 aa20.13■□□□□ 0.81
Ubb-201ENSMUST00000019649 WaslQ91YD9 501 aa20.13■□□□□ 0.81
Ubb-201ENSMUST00000019649 Mybbp1aQ7TPV4 1344 aaKnown RBP20.13■□□□□ 0.81
Ubb-201ENSMUST00000019649 Zap70P43404 618 aa20.12■□□□□ 0.81
Ubb-201ENSMUST00000019649 Plcb3P51432 1234 aaKnown RBP20.12■□□□□ 0.81
Ubb-201ENSMUST00000019649 Eif5bQ05D44 1216 aaKnown RBP20.12■□□□□ 0.81
Ubb-201ENSMUST00000019649 Dpf2Q61103 391 aaKnown RBP20.12■□□□□ 0.81
Ubb-201ENSMUST00000019649 Gjd4Q8BSD4 364 aa20.12■□□□□ 0.81
Ubb-201ENSMUST00000019649 Ptf1aQ9QX98 324 aa20.12■□□□□ 0.81
Ubb-201ENSMUST00000019649 Zbtb38Q3LR78 1197 aa20.11■□□□□ 0.81
Ubb-201ENSMUST00000019649 Flt1P35969 1333 aa20.1■□□□□ 0.81
Ubb-201ENSMUST00000019649 4931408C20RikE9PWP9 1381 aa20.1■□□□□ 0.81
Ubb-201ENSMUST00000019649 Cfdp1O88271 295 aaKnown RBP20.1■□□□□ 0.81
Ubb-201ENSMUST00000019649 Q3UPC7 1272 aa20.1■□□□□ 0.81
Ubb-201ENSMUST00000019649 Pcsk7Q61139 770 aa20.1■□□□□ 0.81
Ubb-201ENSMUST00000019649 UvssaQ9D479 717 aa20.1■□□□□ 0.81
Ubb-201ENSMUST00000019649 Cyp2ab1S4R196 498 aa20.1■□□□□ 0.81
Ubb-201ENSMUST00000019649 Myo3bQ1EG27 1305 aa20.1■□□□□ 0.81
Ubb-201ENSMUST00000019649 Zfp646Q6NV66 1788 aa20.09■□□□□ 0.81
Ubb-201ENSMUST00000019649 Trim34bJ3QNR8 485 aa20.09■□□□□ 0.81
Ubb-201ENSMUST00000019649 Yy1Q00899 414 aa20.09■□□□□ 0.81
Ubb-201ENSMUST00000019649 Map3k13Q1HKZ5 959 aa20.09■□□□□ 0.81
Ubb-201ENSMUST00000019649 EappQ5BU09 281 aa20.09■□□□□ 0.81
Ubb-201ENSMUST00000019649 BcanQ61361 883 aa20.09■□□□□ 0.81
Ubb-201ENSMUST00000019649 Insm1Q63ZV0 521 aa20.09■□□□□ 0.81
Ubb-201ENSMUST00000019649 Ltn1Q6A009 1767 aa20.09■□□□□ 0.81
Ubb-201ENSMUST00000019649 Col24a1Q30D77 1733 aa20.08■□□□□ 0.81
Ubb-201ENSMUST00000019649 Glg1Q61543 1175 aaKnown RBP20.08■□□□□ 0.81
Ubb-201ENSMUST00000019649 Sde2Q8K1J5 448 aaKnown RBP20.08■□□□□ 0.81
Ubb-201ENSMUST00000019649 Grm8P47743 908 aa20.07■□□□□ 0.8
Ubb-201ENSMUST00000019649 Adarb2Q9JI20 745 aa20.07■□□□□ 0.8
Ubb-201ENSMUST00000019649 Eif3aP23116 1344 aaKnown RBP20.07■□□□□ 0.8
Ubb-201ENSMUST00000019649 CfhP06909 1234 aa20.06■□□□□ 0.8
Ubb-201ENSMUST00000019649 Dydc2Q9D3X8 139 aa20.06■□□□□ 0.8
Ubb-201ENSMUST00000019649 Upf2A2AT37 1269 aaKnown RBP20.05■□□□□ 0.8
Ubb-201ENSMUST00000019649 Oas2E9Q9A9 742 aa20.05■□□□□ 0.8
Ubb-201ENSMUST00000019649 Csf1rP09581 977 aa20.05■□□□□ 0.8
Ubb-201ENSMUST00000019649 Map3k9Q3U1V8 1077 aa20.05■□□□□ 0.8
Ubb-201ENSMUST00000019649 Aldh1l1Q8R0Y6 902 aa20.05■□□□□ 0.8
Ubb-201ENSMUST00000019649 Igf2rQ07113 2483 aaKnown RBP20.05■□□□□ 0.8
Ubb-201ENSMUST00000019649 L3mbtl2P59178 703 aa20.05■□□□□ 0.8
Ubb-201ENSMUST00000019649 Gnat3Q3V3I2 354 aa20.04■□□□□ 0.8
Ubb-201ENSMUST00000019649 Kif2cQ922S8 721 aa20.04■□□□□ 0.8
Ubb-201ENSMUST00000019649 Nrxn2E9Q7X7 1710 aa20.03■□□□□ 0.8
Ubb-201ENSMUST00000019649 NexnQ7TPW1 607 aa20.03■□□□□ 0.8
Ubb-201ENSMUST00000019649 Smc4Q8CG47 1286 aa20.03■□□□□ 0.8
Ubb-201ENSMUST00000019649 Lgr5Q9Z1P4 907 aa20.03■□□□□ 0.8
Ubb-201ENSMUST00000019649 Heg1E9Q7X6 1337 aa20.02■□□□□ 0.8
Ubb-201ENSMUST00000019649 XpcP51612 930 aa20.02■□□□□ 0.8
Ubb-201ENSMUST00000019649 Rps8P62242 208 aaKnown RBP20.02■□□□□ 0.8
Ubb-201ENSMUST00000019649 Map3k15A2AQW0 1331 aa20.01■□□□□ 0.79
Ubb-201ENSMUST00000019649 NfixP70257 488 aa20.01■□□□□ 0.79
Ubb-201ENSMUST00000019649 Vil1Q62468 827 aa20.01■□□□□ 0.79
Ubb-201ENSMUST00000019649 NpcdF8VQB8 469 aa20■□□□□ 0.79
Ubb-201ENSMUST00000019649 Nol10Q5RJG1 687 aaKnown RBP20■□□□□ 0.79
Ubb-201ENSMUST00000019649 Itga6Q61739 1091 aa20■□□□□ 0.79
Ubb-201ENSMUST00000019649 Znf330Q922H9 316 aa20■□□□□ 0.79
Ubb-201ENSMUST00000019649 Naa16Q9DBB4 864 aa20■□□□□ 0.79
Ubb-201ENSMUST00000019649 Vsig10D3YX43 558 aa19.99■□□□□ 0.79
Ubb-201ENSMUST00000019649 Best3Q6H1V1 669 aa19.99■□□□□ 0.79
Ubb-201ENSMUST00000019649 Rtn4Q99P72 1162 aaKnown RBP19.99■□□□□ 0.79
Ubb-201ENSMUST00000019649 Fam122aQ9DB52 284 aa19.99■□□□□ 0.79
Ubb-201ENSMUST00000019649 Phrf1A6H619 1682 aa19.99■□□□□ 0.79
Ubb-201ENSMUST00000019649 Scn9aQ62205 1984 aa19.99■□□□□ 0.79
Ubb-201ENSMUST00000019649 Csrnp3P59055 597 aa19.99■□□□□ 0.79
Ubb-201ENSMUST00000019649 Chrna5Q2MKA5 467 aa19.99■□□□□ 0.79
Ubb-201ENSMUST00000019649 VeztQ3ZK22 780 aa19.99■□□□□ 0.79
Ubb-201ENSMUST00000019649 Mum1Q6DID5 682 aa19.99■□□□□ 0.79
Ubb-201ENSMUST00000019649 Gpr101Q80T62 511 aa19.99■□□□□ 0.79
Ubb-201ENSMUST00000019649 Stk32bQ9JJX8 414 aa19.99■□□□□ 0.79
Ubb-201ENSMUST00000019649 Zc3h15Q3TIV5 426 aaKnown RBP19.98■□□□□ 0.79
Retrieved 100 of 22,080 RNA–protein pairs in 15.1 ms