RNA–Protein interactions for RNA: ENSMUST00000009885.13

Ubp1-201, Transcript of Upstream-binding protein 1, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Ubp1, Length 3,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-201ENSMUST00000009885 A0A0U1RNP2 1173 aa21.82■■□□□ 1.08
Ubp1-201ENSMUST00000009885 Igsf3Q6ZQA6 1194 aa21.82■■□□□ 1.08
Ubp1-201ENSMUST00000009885 Wdr3Q8BHB4 942 aaKnown RBP21.82■■□□□ 1.08
Ubp1-201ENSMUST00000009885 Ercc3P49135 783 aa21.82■■□□□ 1.08
Ubp1-201ENSMUST00000009885 Mybbp1aQ7TPV4 1344 aaKnown RBP21.82■■□□□ 1.08
Ubp1-201ENSMUST00000009885 Kcnk13Q8R1P5 405 aa21.82■■□□□ 1.08
Ubp1-201ENSMUST00000009885 Hoxb7P09024 217 aa21.82■■□□□ 1.08
Ubp1-201ENSMUST00000009885 Tmem132eQ6IEE6 982 aa21.82■■□□□ 1.08
Ubp1-201ENSMUST00000009885 Synj2Q9D2G5 1434 aa21.81■■□□□ 1.08
Ubp1-201ENSMUST00000009885 Atp8b3Q6UQ17 1335 aa21.81■■□□□ 1.08
Ubp1-201ENSMUST00000009885 RbsnQ80Y56 783 aa21.81■■□□□ 1.08
Ubp1-201ENSMUST00000009885 Luzp1Q8R4U7 1068 aaKnown RBP21.81■■□□□ 1.08
Ubp1-201ENSMUST00000009885 Zbtb3Q91X45 518 aa21.81■■□□□ 1.08
Ubp1-201ENSMUST00000009885 NmiO35309 314 aa21.81■■□□□ 1.08
Ubp1-201ENSMUST00000009885 PnnO35691 725 aaKnown RBP21.81■■□□□ 1.08
Ubp1-201ENSMUST00000009885 Ets1P27577 440 aa21.81■■□□□ 1.08
Ubp1-201ENSMUST00000009885 Kif2aP28740 705 aa21.81■■□□□ 1.08
Ubp1-201ENSMUST00000009885 Tgfb1i1Q62219 461 aa21.81■■□□□ 1.08
Ubp1-201ENSMUST00000009885 Gnl2Q99LH1 728 aaKnown RBP21.81■■□□□ 1.08
Ubp1-201ENSMUST00000009885 Dnaaf2Q8BPI1 814 aa21.8■■□□□ 1.08
Ubp1-201ENSMUST00000009885 NefhP19246 1090 aa21.8■■□□□ 1.08
Ubp1-201ENSMUST00000009885 Map3k2Q61083 619 aa21.8■■□□□ 1.08
Ubp1-201ENSMUST00000009885 PhaxQ9JJT9 385 aaKnown RBP21.8■■□□□ 1.08
Ubp1-201ENSMUST00000009885 Atp10aO54827 1508 aa21.8■■□□□ 1.08
Ubp1-201ENSMUST00000009885 Rec8Q8C5S7 591 aa21.8■■□□□ 1.08
Ubp1-201ENSMUST00000009885 NhsB1AV60 1647 aa21.8■■□□□ 1.08
Ubp1-201ENSMUST00000009885 Ccdc112A0AUP1 442 aa21.79■■□□□ 1.08
Ubp1-201ENSMUST00000009885 Cdk4P30285 303 aa21.79■■□□□ 1.08
Ubp1-201ENSMUST00000009885 Znf532Q6NXK2 1036 aa21.79■■□□□ 1.08
Ubp1-201ENSMUST00000009885 Atp2b1G5E829 1220 aa21.79■■□□□ 1.08
Ubp1-201ENSMUST00000009885 Hmx1O70218 332 aa21.79■■□□□ 1.08
Ubp1-201ENSMUST00000009885 Limch1Q3UH68 1057 aa21.79■■□□□ 1.08
Ubp1-201ENSMUST00000009885 Cfap99A0A140LIX9 648 aa21.79■■□□□ 1.08
Ubp1-201ENSMUST00000009885 Eef2kO08796 724 aa21.79■■□□□ 1.08
Ubp1-201ENSMUST00000009885 Gas2l3Q3UWW6 683 aa21.79■■□□□ 1.08
Ubp1-201ENSMUST00000009885 Rps6kb1Q8BSK8 525 aa21.79■■□□□ 1.08
Ubp1-201ENSMUST00000009885 Tlcd1Q99JT6 247 aa21.79■■□□□ 1.08
Ubp1-201ENSMUST00000009885 Abca8aQ8K442 1620 aa21.79■■□□□ 1.08
Ubp1-201ENSMUST00000009885 Ube2oQ6ZPJ3 1288 aa21.78■■□□□ 1.08
Ubp1-201ENSMUST00000009885 Add2Q9QYB8 725 aa21.78■■□□□ 1.08
Ubp1-201ENSMUST00000009885 Pms1Q8K119 917 aa21.78■■□□□ 1.08
Ubp1-201ENSMUST00000009885 Prex1Q69ZK0 1650 aa21.78■■□□□ 1.08
Ubp1-201ENSMUST00000009885 Tpm4Q6IRU2 248 aa21.78■■□□□ 1.08
Ubp1-201ENSMUST00000009885 Actn3O88990 900 aaKnown RBP21.77■■□□□ 1.08
Ubp1-201ENSMUST00000009885 Arhgap23Q69ZH9 1483 aa21.77■■□□□ 1.08
Ubp1-201ENSMUST00000009885 Phf23Q8BSN5 401 aa21.77■■□□□ 1.08
Ubp1-201ENSMUST00000009885 Rnf123Q5XPI3 1314 aa21.77■■□□□ 1.08
Ubp1-201ENSMUST00000009885 Lcmt1A0A0U1RNF2 332 aa21.76■■□□□ 1.07
Ubp1-201ENSMUST00000009885 Clec11aO88200 328 aa21.76■■□□□ 1.07
Ubp1-201ENSMUST00000009885 Hoxa7P02830 229 aa21.76■■□□□ 1.07
Ubp1-201ENSMUST00000009885 Csrnp1P59054 583 aa21.76■■□□□ 1.07
Ubp1-201ENSMUST00000009885 Mtmr3Q8K296 1196 aa21.76■■□□□ 1.07
Ubp1-201ENSMUST00000009885 Aox1O54754 1333 aa21.76■■□□□ 1.07
Ubp1-201ENSMUST00000009885 Btbd11Q6GQW0 1109 aa21.76■■□□□ 1.07
Ubp1-201ENSMUST00000009885 Taf5lQ91WQ5 589 aa21.76■■□□□ 1.07
Ubp1-201ENSMUST00000009885 Znf771Q8BJ90 317 aa21.76■■□□□ 1.07
Ubp1-201ENSMUST00000009885 4930504O13RikQ8C5Z9 145 aa21.76■■□□□ 1.07
Ubp1-201ENSMUST00000009885 Bmp2kQ91Z96 1138 aa21.76■■□□□ 1.07
Ubp1-201ENSMUST00000009885 Usp28Q5I043 1051 aa21.75■■□□□ 1.07
Ubp1-201ENSMUST00000009885 Tmco3Q8BH01 678 aa21.75■■□□□ 1.07
Ubp1-201ENSMUST00000009885 Nckap5lQ6GQX2 1323 aa21.75■■□□□ 1.07
Ubp1-201ENSMUST00000009885 Maats1Q8BRC6 783 aa21.75■■□□□ 1.07
Ubp1-201ENSMUST00000009885 Cyp2d12Q8BVD2 504 aa21.75■■□□□ 1.07
Ubp1-201ENSMUST00000009885 Foxp4Q9DBY0 795 aaKnown RBP21.75■■□□□ 1.07
Ubp1-201ENSMUST00000009885 Abca9Q8K449 1623 aa21.75■■□□□ 1.07
Ubp1-201ENSMUST00000009885 1700006A11RikB9EHI3 544 aa21.75■■□□□ 1.07
Ubp1-201ENSMUST00000009885 Jakmip2D3YXK0 820 aa21.75■■□□□ 1.07
Ubp1-201ENSMUST00000009885 Arglu1Q3UL36 271 aaKnown RBP21.75■■□□□ 1.07
Ubp1-201ENSMUST00000009885 Q8BZJ8 459 aa21.75■■□□□ 1.07
Ubp1-201ENSMUST00000009885 Znf541Q0GGX2 1363 aa21.74■■□□□ 1.07
Ubp1-201ENSMUST00000009885 Ddx46Q569Z5 1032 aaKnown RBP21.74■■□□□ 1.07
Ubp1-201ENSMUST00000009885 Larp1Q6ZQ58 1072 aaKnown RBP21.74■■□□□ 1.07
Ubp1-201ENSMUST00000009885 Gigyf1Q99MR1 1044 aaKnown RBP21.74■■□□□ 1.07
Ubp1-201ENSMUST00000009885 Xpo4Q9ESJ0 1151 aa21.74■■□□□ 1.07
Ubp1-201ENSMUST00000009885 Echdc1Q9D9V3 322 aa21.74■■□□□ 1.07
Ubp1-201ENSMUST00000009885 Eif5P59325 429 aaKnown RBP21.73■■□□□ 1.07
Ubp1-201ENSMUST00000009885 Bag1Q60739 355 aa21.73■■□□□ 1.07
Ubp1-201ENSMUST00000009885 Abca17E9PX95 1733 aa21.73■■□□□ 1.07
Ubp1-201ENSMUST00000009885 Tbc1d4Q8BYJ6 1307 aa21.73■■□□□ 1.07
Ubp1-201ENSMUST00000009885 Zfp597E9Q6S0 419 aa21.73■■□□□ 1.07
Ubp1-201ENSMUST00000009885 Gsdma3Q5Y4Y6 464 aa21.73■■□□□ 1.07
Ubp1-201ENSMUST00000009885 Ppp1r10Q80W00 888 aaKnown RBP21.73■■□□□ 1.07
Ubp1-201ENSMUST00000009885 Stxbp4Q9WV89 557 aa21.73■■□□□ 1.07
Ubp1-201ENSMUST00000009885 Gabpb2P81069 414 aa21.72■■□□□ 1.07
Ubp1-201ENSMUST00000009885 Tubb6Q922F4 447 aa21.72■■□□□ 1.07
Ubp1-201ENSMUST00000009885 Lonp2Q9DBN5 852 aa21.72■■□□□ 1.07
Ubp1-201ENSMUST00000009885 Dnajc25A2ALW5 357 aa21.72■■□□□ 1.07
Ubp1-201ENSMUST00000009885 Ccdc158Q8CDI6 1109 aa21.72■■□□□ 1.07
Ubp1-201ENSMUST00000009885 Mrpl44Q9CY73 333 aaKnown RBP21.72■■□□□ 1.07
Ubp1-201ENSMUST00000009885 Ms4a1P19437 291 aa21.72■■□□□ 1.07
Ubp1-201ENSMUST00000009885 Rtel1Q0VGM9 1203 aa21.72■■□□□ 1.07
Ubp1-201ENSMUST00000009885 Ttll12Q3UDE2 639 aa21.72■■□□□ 1.07
Ubp1-201ENSMUST00000009885 Zfp317Q8C0Q5 607 aa21.72■■□□□ 1.07
Ubp1-201ENSMUST00000009885 Cplx1P63040 134 aa21.71■■□□□ 1.07
Ubp1-201ENSMUST00000009885 Bicc1Q99MQ1 977 aaKnown RBP21.71■■□□□ 1.07
Ubp1-201ENSMUST00000009885 Ctdnep1Q3TP92 244 aa21.71■■□□□ 1.07
Ubp1-201ENSMUST00000009885 Ppp1r18Q8BQ30 594 aa21.71■■□□□ 1.07
Ubp1-201ENSMUST00000009885 Amotl2Q8K371 772 aa21.71■■□□□ 1.07
Ubp1-201ENSMUST00000009885 Tmem131lQ3U3D7 1597 aa21.71■■□□□ 1.07
Ubp1-201ENSMUST00000009885 Btn2a2A4QPC6 514 aa21.71■■□□□ 1.07
Retrieved 100 of 22,080 RNA–protein pairs in 41.3 ms