RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 FER1L5A0AVI2 2057 aa16.33■□□□□ 0.2
SHKBP1-224ENST00000600718 C2orf92A0A1B0GVN3 265 aa16.33■□□□□ 0.2
SHKBP1-224ENST00000600718 PEX12O00623 359 aa16.33■□□□□ 0.2
SHKBP1-224ENST00000600718 H1F0P07305 194 aaKnown RBP16.33■□□□□ 0.2
SHKBP1-224ENST00000600718 RFX3P48380 749 aa16.33■□□□□ 0.2
SHKBP1-224ENST00000600718 GPR143P51810 404 aa16.33■□□□□ 0.2
SHKBP1-224ENST00000600718 FOXL2P58012 376 aa16.33■□□□□ 0.2
SHKBP1-224ENST00000600718 ADARB1P78563 741 aaKnown RBP16.33■□□□□ 0.2
SHKBP1-224ENST00000600718 NPTX1Q15818 432 aa16.33■□□□□ 0.2
SHKBP1-224ENST00000600718 DECR1Q16698 335 aa16.33■□□□□ 0.2
SHKBP1-224ENST00000600718 ZSWIM7Q19AV6 140 aa16.33■□□□□ 0.2
SHKBP1-224ENST00000600718 HLA-DQA1Q5Y7H0 255 aa16.33■□□□□ 0.2
SHKBP1-224ENST00000600718 TMEM205Q6UW68 189 aa16.33■□□□□ 0.2
SHKBP1-224ENST00000600718 ZNF517Q6ZMY9 492 aaPredicted RBP16.33■□□□□ 0.2
SHKBP1-224ENST00000600718 SLC29A4Q7RTT9 530 aa16.33■□□□□ 0.2
SHKBP1-224ENST00000600718 CHERPQ8IWX8 916 aaKnown RBP16.33■□□□□ 0.2
SHKBP1-224ENST00000600718 ATG16L2Q8NAA4 619 aa16.33■□□□□ 0.2
SHKBP1-224ENST00000600718 PIK3C3Q8NEB9 887 aa16.33■□□□□ 0.2
SHKBP1-224ENST00000600718 PRRC1Q96M27 445 aa16.33■□□□□ 0.2
SHKBP1-224ENST00000600718 ALPK1Q96QP1 1244 aa16.33■□□□□ 0.2
SHKBP1-224ENST00000600718 PSD2Q9BQI7 771 aa16.33■□□□□ 0.2
SHKBP1-224ENST00000600718 FNDC11Q9BVV2 318 aa16.33■□□□□ 0.2
SHKBP1-224ENST00000600718 DDA1Q9BW61 102 aa16.33■□□□□ 0.2
SHKBP1-224ENST00000600718 FAM86C1Q9NVL1 165 aa16.33■□□□□ 0.2
SHKBP1-224ENST00000600718 RLIMQ9NVW2 624 aa16.33■□□□□ 0.2
SHKBP1-224ENST00000600718 RHCGQ9UBD6 479 aa16.33■□□□□ 0.2
SHKBP1-224ENST00000600718 C19orf25Q9UFG5 118 aaPredicted RBP16.33■□□□□ 0.2
SHKBP1-224ENST00000600718 MRTO4Q9UKD2 239 aaKnown RBP16.33■□□□□ 0.2
SHKBP1-224ENST00000600718 TMCC3Q9ULS5 477 aa16.33■□□□□ 0.2
SHKBP1-224ENST00000600718 VPS13AQ96RL7 3174 aa16.32■□□□□ 0.2
SHKBP1-224ENST00000600718 NPIPA5A0A0B4J1W7 369 aa16.32■□□□□ 0.2
SHKBP1-224ENST00000600718 CENPVL1A0A0U1RR11 272 aa16.32■□□□□ 0.2
SHKBP1-224ENST00000600718 SAGE2PA6NJ88 616 aa16.32■□□□□ 0.2
SHKBP1-224ENST00000600718 NPIPA7E9PJI5 369 aa16.32■□□□□ 0.2
SHKBP1-224ENST00000600718 JMJD7P0C870 316 aa16.32■□□□□ 0.2
SHKBP1-224ENST00000600718 NPIPA8P0DM63 369 aa16.32■□□□□ 0.2
SHKBP1-224ENST00000600718 ANXA8P13928 327 aa16.32■□□□□ 0.2
SHKBP1-224ENST00000600718 IGFBP5P24593 272 aa16.32■□□□□ 0.2
SHKBP1-224ENST00000600718 RGS8P57771 180 aaPredicted RBP16.32■□□□□ 0.2
SHKBP1-224ENST00000600718 EIF3IQ13347 325 aaKnown RBP16.32■□□□□ 0.2
SHKBP1-224ENST00000600718 EBPQ15125 230 aaKnown RBP16.32■□□□□ 0.2
SHKBP1-224ENST00000600718 ZNF141Q15928 474 aa16.32■□□□□ 0.2
SHKBP1-224ENST00000600718 NNATQ16517 81 aa16.32■□□□□ 0.2
SHKBP1-224ENST00000600718 ZIK1Q3SY52 487 aaPredicted RBP16.32■□□□□ 0.2
SHKBP1-224ENST00000600718 CPEB2Q7Z5Q1 589 aaKnown RBP16.32■□□□□ 0.2
SHKBP1-224ENST00000600718 TAGAPQ8N103 731 aa16.32■□□□□ 0.2
SHKBP1-224ENST00000600718 NFAM1Q8NET5 270 aaPredicted RBP16.32■□□□□ 0.2
SHKBP1-224ENST00000600718 OR10G2Q8NGC3 310 aa16.32■□□□□ 0.2
SHKBP1-224ENST00000600718 FAM81AQ8TBF8 368 aa16.32■□□□□ 0.2
SHKBP1-224ENST00000600718 FAM210AQ96ND0 272 aa16.32■□□□□ 0.2
SHKBP1-224ENST00000600718 NXF5Q9H1B4 397 aaKnown RBP16.32■□□□□ 0.2
SHKBP1-224ENST00000600718 TOR3AQ9H497 397 aa16.32■□□□□ 0.2
SHKBP1-224ENST00000600718 KIF17Q9P2E2 1029 aa16.32■□□□□ 0.2
SHKBP1-224ENST00000600718 PPIEQ9UNP9 301 aaKnown RBP16.32■□□□□ 0.2
SHKBP1-224ENST00000600718 WDFY4Q6ZS81 3184 aa16.32■□□□□ 0.2
SHKBP1-224ENST00000600718 ASCC3Q8N3C0 2202 aaKnown RBP16.31■□□□□ 0.2
SHKBP1-224ENST00000600718 CCDC187A0A096LP49 1063 aa16.31■□□□□ 0.2
SHKBP1-224ENST00000600718 ARRDC5A6NEK1 342 aa16.31■□□□□ 0.2
SHKBP1-224ENST00000600718 NPIPB9F8W1W9 429 aa16.31■□□□□ 0.2
SHKBP1-224ENST00000600718 AP3D1O14617 1153 aa16.31■□□□□ 0.2
SHKBP1-224ENST00000600718 PCDH17O14917 1159 aa16.31■□□□□ 0.2
SHKBP1-224ENST00000600718 CCNB2O95067 398 aa16.31■□□□□ 0.2
SHKBP1-224ENST00000600718 CD63P08962 238 aa16.31■□□□□ 0.2
SHKBP1-224ENST00000600718 CCNYL3P0C7X3 344 aa16.31■□□□□ 0.2
SHKBP1-224ENST00000600718 IFNA8P32881 189 aa16.31■□□□□ 0.2
SHKBP1-224ENST00000600718 ATP12AP54707 1039 aa16.31■□□□□ 0.2
SHKBP1-224ENST00000600718 LSAMPQ13449 338 aa16.31■□□□□ 0.2
SHKBP1-224ENST00000600718 PIN1Q13526 163 aaPredicted RBP16.31■□□□□ 0.2
SHKBP1-224ENST00000600718 TTC23Q5W5X9 447 aa16.31■□□□□ 0.2
SHKBP1-224ENST00000600718 FAM199XQ6PEV8 388 aaPredicted RBP16.31■□□□□ 0.2
SHKBP1-224ENST00000600718 FAM198BQ6UWH4 519 aa16.31■□□□□ 0.2
SHKBP1-224ENST00000600718 DHRS13Q6UX07 377 aa16.31■□□□□ 0.2
SHKBP1-224ENST00000600718 C9orf40Q8IXQ3 194 aa16.31■□□□□ 0.2
SHKBP1-224ENST00000600718 GALNT6Q8NCL4 622 aa16.31■□□□□ 0.2
SHKBP1-224ENST00000600718 B3GNT7Q8NFL0 401 aa16.31■□□□□ 0.2
SHKBP1-224ENST00000600718 OIT3Q8WWZ8 545 aa16.31■□□□□ 0.2
SHKBP1-224ENST00000600718 SEMA4CQ9C0C4 833 aa16.31■□□□□ 0.2
SHKBP1-224ENST00000600718 HOXD1Q9GZZ0 328 aa16.31■□□□□ 0.2
SHKBP1-224ENST00000600718 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.31■□□□□ 0.2
SHKBP1-224ENST00000600718 PISDQ9UG56 409 aa16.31■□□□□ 0.2
SHKBP1-224ENST00000600718 IGHV3-20A0A0C4DH32 117 aa16.31■□□□□ 0.2
SHKBP1-224ENST00000600718 A0A1W2PRQ8 180 aa16.31■□□□□ 0.2
SHKBP1-224ENST00000600718 CDHR4A6H8M9 788 aa16.31■□□□□ 0.2
SHKBP1-224ENST00000600718 CLDN24A6NM45 220 aa16.31■□□□□ 0.2
SHKBP1-224ENST00000600718 IL33O95760 270 aa16.31■□□□□ 0.2
SHKBP1-224ENST00000600718 CDH2P19022 906 aaPredicted RBP16.31■□□□□ 0.2
SHKBP1-224ENST00000600718 DGCR6Q14129 220 aa16.31■□□□□ 0.2
SHKBP1-224ENST00000600718 DCST1Q5T197 706 aa16.31■□□□□ 0.2
SHKBP1-224ENST00000600718 MRPL2Q5T653 305 aaKnown RBP16.31■□□□□ 0.2
SHKBP1-224ENST00000600718 C17orf47Q8NEP4 570 aa16.31■□□□□ 0.2
SHKBP1-224ENST00000600718 ZNF555Q8NEP9 628 aa16.31■□□□□ 0.2
SHKBP1-224ENST00000600718 MBOAT4Q96T53 435 aa16.31■□□□□ 0.2
SHKBP1-224ENST00000600718 LPAR4Q99677 370 aa16.31■□□□□ 0.2
SHKBP1-224ENST00000600718 WWTR1Q9GZV5 400 aa16.31■□□□□ 0.2
SHKBP1-224ENST00000600718 FAM118AQ9NWS6 357 aa16.31■□□□□ 0.2
SHKBP1-224ENST00000600718 UBAP1Q9NZ09 502 aa16.31■□□□□ 0.2
SHKBP1-224ENST00000600718 A0A1B0GVG6 124 aa16.3■□□□□ 0.2
SHKBP1-224ENST00000600718 PLD2O14939 933 aa16.3■□□□□ 0.2
SHKBP1-224ENST00000600718 TO15178 435 aa16.3■□□□□ 0.2
SHKBP1-224ENST00000600718 FRS3O43559 492 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms