RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 CFAP46Q8IYW2 2715 aa13.68□□□□□ -0.22
RNF4-210ENST00000508235 C2orf72A6NCS6 295 aa13.68□□□□□ -0.22
RNF4-210ENST00000508235 H3BNH8 94 aa13.68□□□□□ -0.22
RNF4-210ENST00000508235 AQP7O14520 342 aa13.68□□□□□ -0.22
RNF4-210ENST00000508235 PRRG2O14669 202 aa13.68□□□□□ -0.22
RNF4-210ENST00000508235 CCDC22O60826 627 aa13.68□□□□□ -0.22
RNF4-210ENST00000508235 ANGPTL1O95841 491 aa13.68□□□□□ -0.22
RNF4-210ENST00000508235 HPNP05981 417 aa13.68□□□□□ -0.22
RNF4-210ENST00000508235 SNRPB2P08579 225 aaKnown RBP13.68□□□□□ -0.22
RNF4-210ENST00000508235 OR12D1P0DN82 309 aa13.68□□□□□ -0.22
RNF4-210ENST00000508235 CAPN3P20807 821 aa13.68□□□□□ -0.22
RNF4-210ENST00000508235 SRD5A2P31213 254 aa13.68□□□□□ -0.22
RNF4-210ENST00000508235 ATP12AP54707 1039 aa13.68□□□□□ -0.22
RNF4-210ENST00000508235 CASP9P55211 416 aa13.68□□□□□ -0.22
RNF4-210ENST00000508235 GNGT1P63211 74 aa13.68□□□□□ -0.22
RNF4-210ENST00000508235 GTF3C1Q12789 2109 aa13.68□□□□□ -0.22
RNF4-210ENST00000508235 GANABQ14697 944 aaKnown RBP13.68□□□□□ -0.22
RNF4-210ENST00000508235 FLYWCH1Q4VC44 716 aa13.68□□□□□ -0.22
RNF4-210ENST00000508235 LRIF1Q5T3J3 769 aa13.68□□□□□ -0.22
RNF4-210ENST00000508235 Q6ZPB1 254 aaPredicted RBP13.68□□□□□ -0.22
RNF4-210ENST00000508235 SPATA21Q7Z572 469 aa13.68□□□□□ -0.22
RNF4-210ENST00000508235 MTERF4Q7Z6M4 381 aaKnown RBP13.68□□□□□ -0.22
RNF4-210ENST00000508235 CPLX4Q7Z7G2 160 aa13.68□□□□□ -0.22
RNF4-210ENST00000508235 GALNT10Q86SR1 603 aa13.68□□□□□ -0.22
RNF4-210ENST00000508235 MARCH3Q86UD3 253 aa13.68□□□□□ -0.22
RNF4-210ENST00000508235 OR4K17Q8NGC6 315 aa13.68□□□□□ -0.22
RNF4-210ENST00000508235 NEIL3Q8TAT5 605 aa13.68□□□□□ -0.22
RNF4-210ENST00000508235 SARAFQ96BY9 339 aa13.68□□□□□ -0.22
RNF4-210ENST00000508235 NMUR2Q9GZQ4 415 aa13.68□□□□□ -0.22
RNF4-210ENST00000508235 PAIP1Q9H074 479 aaKnown RBP13.68□□□□□ -0.22
RNF4-210ENST00000508235 FLRT3Q9NZU0 649 aa13.68□□□□□ -0.22
RNF4-210ENST00000508235 CORO2BQ9UQ03 480 aa13.68□□□□□ -0.22
RNF4-210ENST00000508235 MRPS18CQ9Y3D5 142 aaKnown RBP13.68□□□□□ -0.22
RNF4-210ENST00000508235 PCDHB14Q9Y5E9 798 aa13.68□□□□□ -0.22
RNF4-210ENST00000508235 TMEM247A6NEH6 219 aa13.67□□□□□ -0.22
RNF4-210ENST00000508235 CLIC1O00299 241 aa13.67□□□□□ -0.22
RNF4-210ENST00000508235 HMGN4O00479 90 aa13.67□□□□□ -0.22
RNF4-210ENST00000508235 BCKDKO14874 412 aa13.67□□□□□ -0.22
RNF4-210ENST00000508235 SLC22A2O15244 555 aa13.67□□□□□ -0.22
RNF4-210ENST00000508235 WISP2O76076 250 aa13.67□□□□□ -0.22
RNF4-210ENST00000508235 CELA3AP09093 270 aa13.67□□□□□ -0.22
RNF4-210ENST00000508235 MSX1P28360 303 aa13.67□□□□□ -0.22
RNF4-210ENST00000508235 DCTP40126 519 aa13.67□□□□□ -0.22
RNF4-210ENST00000508235 CRATP43155 626 aa13.67□□□□□ -0.22
RNF4-210ENST00000508235 SEC24CP53992 1094 aa13.67□□□□□ -0.22
RNF4-210ENST00000508235 HSF1Q00613 529 aa13.67□□□□□ -0.22
RNF4-210ENST00000508235 SF3A3Q12874 501 aaKnown RBP eCLIP13.67□□□□□ -0.22
RNF4-210ENST00000508235 FADDQ13158 208 aa13.67□□□□□ -0.22
RNF4-210ENST00000508235 STX5Q13190 355 aa13.67□□□□□ -0.22
RNF4-210ENST00000508235 C4orf17Q53FE4 359 aa13.67□□□□□ -0.22
RNF4-210ENST00000508235 ZAR1Q86SH2 424 aa13.67□□□□□ -0.22
RNF4-210ENST00000508235 FAM26EQ8N5C1 309 aa13.67□□□□□ -0.22
RNF4-210ENST00000508235 FAM57AQ8TBR7 257 aa13.67□□□□□ -0.22
RNF4-210ENST00000508235 PNPT1Q8TCS8 783 aaKnown RBP13.67□□□□□ -0.22
RNF4-210ENST00000508235 DUSP19Q8WTR2 217 aa13.67□□□□□ -0.22
RNF4-210ENST00000508235 PMM1Q92871 262 aa13.67□□□□□ -0.22
RNF4-210ENST00000508235 RAB8BQ92930 207 aa13.67□□□□□ -0.22
RNF4-210ENST00000508235 ROPN1LQ96C74 230 aa13.67□□□□□ -0.22
RNF4-210ENST00000508235 TRNT1Q96Q11 434 aaKnown RBP13.67□□□□□ -0.22
RNF4-210ENST00000508235 ELAC2Q9BQ52 826 aaKnown RBP13.67□□□□□ -0.22
RNF4-210ENST00000508235 ZNF350Q9GZX5 532 aa13.67□□□□□ -0.22
RNF4-210ENST00000508235 SAR1AQ9NR31 198 aa13.67□□□□□ -0.22
RNF4-210ENST00000508235 SLC6A13Q9NSD5 602 aa13.67□□□□□ -0.22
RNF4-210ENST00000508235 FBXO34Q9NWN3 711 aa13.67□□□□□ -0.22
RNF4-210ENST00000508235 DKKL1Q9UK85 242 aa13.67□□□□□ -0.22
RNF4-210ENST00000508235 SLC5A6Q9Y289 635 aa13.67□□□□□ -0.22
RNF4-210ENST00000508235 WDR45Q9Y484 360 aa13.67□□□□□ -0.22
RNF4-210ENST00000508235 DTNAQ9Y4J8 743 aa13.67□□□□□ -0.22
RNF4-210ENST00000508235 FREM3P0C091 2139 aa13.67□□□□□ -0.22
RNF4-210ENST00000508235 IGLV3-32A0A0A0MS00 114 aa13.66□□□□□ -0.22
RNF4-210ENST00000508235 TRGV8A0A0C4DH27 118 aa13.66□□□□□ -0.22
RNF4-210ENST00000508235 CA7P43166 264 aa13.66□□□□□ -0.22
RNF4-210ENST00000508235 DSCR4P56555 118 aaPredicted RBP13.66□□□□□ -0.22
RNF4-210ENST00000508235 PER3P56645 1201 aa13.66□□□□□ -0.22
RNF4-210ENST00000508235 DSTNP60981 165 aa13.66□□□□□ -0.22
RNF4-210ENST00000508235 GNA13Q14344 377 aa13.66□□□□□ -0.22
RNF4-210ENST00000508235 GPR68Q15743 365 aa13.66□□□□□ -0.22
RNF4-210ENST00000508235 ZNF630Q2M218 657 aaPredicted RBP13.66□□□□□ -0.22
RNF4-210ENST00000508235 GPAT3Q53EU6 434 aa13.66□□□□□ -0.22
RNF4-210ENST00000508235 KLHL26Q53HC5 615 aa13.66□□□□□ -0.22
RNF4-210ENST00000508235 PAGE3Q5JUK9 113 aa13.66□□□□□ -0.22
RNF4-210ENST00000508235 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.66□□□□□ -0.22
RNF4-210ENST00000508235 AP1ARQ63HQ0 302 aa13.66□□□□□ -0.22
RNF4-210ENST00000508235 OR5M10Q6IEU7 315 aa13.66□□□□□ -0.22
RNF4-210ENST00000508235 MTFR2Q6P444 385 aa13.66□□□□□ -0.22
RNF4-210ENST00000508235 DPP10Q8N608 796 aa13.66□□□□□ -0.22
RNF4-210ENST00000508235 FADS6Q8N9I5 356 aa13.66□□□□□ -0.22
RNF4-210ENST00000508235 FAM83FQ8NEG4 500 aaPredicted RBP13.66□□□□□ -0.22
RNF4-210ENST00000508235 OR14L1PQ8NHC6 308 aa13.66□□□□□ -0.22
RNF4-210ENST00000508235 RELTQ969Z4 430 aa13.66□□□□□ -0.22
RNF4-210ENST00000508235 OR2B2Q9GZK3 357 aa13.66□□□□□ -0.22
RNF4-210ENST00000508235 FAM107BQ9H098 131 aa13.66□□□□□ -0.22
RNF4-210ENST00000508235 CALML5Q9NZT1 146 aa13.66□□□□□ -0.22
RNF4-210ENST00000508235 P2RX2Q9UBL9 471 aa13.66□□□□□ -0.22
RNF4-210ENST00000508235 LIPGQ9Y5X9 500 aa13.66□□□□□ -0.22
RNF4-210ENST00000508235 GMEB1Q9Y692 573 aa13.66□□□□□ -0.22
RNF4-210ENST00000508235 CAPN7Q9Y6W3 813 aa13.66□□□□□ -0.22
RNF4-210ENST00000508235 C15orf38-AP3S2A0A0A6YYH1 394 aa13.65□□□□□ -0.22
RNF4-210ENST00000508235 BBIP1A8MTZ0 92 aa13.65□□□□□ -0.22
RNF4-210ENST00000508235 EVPLLA8MZ36 301 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms