RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 LIMS3P0CW19 117 aa7.54□□□□□ -1.2
GPC3-204ENST00000631057 LIMS4P0CW20 117 aa7.54□□□□□ -1.2
GPC3-204ENST00000631057 GAAP10253 952 aa7.54□□□□□ -1.2
GPC3-204ENST00000631057 GNSP15586 552 aa7.54□□□□□ -1.2
GPC3-204ENST00000631057 ZNF10P21506 573 aaPredicted RBP7.54□□□□□ -1.2
GPC3-204ENST00000631057 CPN2P22792 545 aa7.54□□□□□ -1.2
GPC3-204ENST00000631057 NTSR1P30989 418 aa7.54□□□□□ -1.2
GPC3-204ENST00000631057 FGF9P31371 208 aaPredicted RBP7.54□□□□□ -1.2
GPC3-204ENST00000631057 KIR2DL1P43626 348 aaPredicted RBP7.54□□□□□ -1.2
GPC3-204ENST00000631057 PDX1P52945 283 aa7.54□□□□□ -1.2
GPC3-204ENST00000631057 CDH11P55287 796 aa7.54□□□□□ -1.2
GPC3-204ENST00000631057 OR2B6P58173 313 aa7.54□□□□□ -1.2
GPC3-204ENST00000631057 RPS25P62851 125 aaKnown RBP7.54□□□□□ -1.2
GPC3-204ENST00000631057 LSM11P83369 360 aaKnown RBP eCLIP7.54□□□□□ -1.2
GPC3-204ENST00000631057 MXD1Q05195 221 aa7.54□□□□□ -1.2
GPC3-204ENST00000631057 MAP4K2Q12851 820 aa7.54□□□□□ -1.2
GPC3-204ENST00000631057 KIR2DS3Q14952 304 aa7.54□□□□□ -1.2
GPC3-204ENST00000631057 SUZ12Q15022 739 aaKnown RBP7.54□□□□□ -1.2
GPC3-204ENST00000631057 LTB4RQ15722 352 aa7.54□□□□□ -1.2
GPC3-204ENST00000631057 KCNJ8Q15842 424 aa7.54□□□□□ -1.2
GPC3-204ENST00000631057 ZNF79Q15937 498 aa7.54□□□□□ -1.2
GPC3-204ENST00000631057 PGGHGQ32M88 737 aa7.54□□□□□ -1.2
GPC3-204ENST00000631057 GLYR1Q49A26 553 aaPredicted RBP7.54□□□□□ -1.2
GPC3-204ENST00000631057 OR2G6Q5TZ20 316 aa7.54□□□□□ -1.2
GPC3-204ENST00000631057 C22orf42Q6IC83 251 aa7.54□□□□□ -1.2
GPC3-204ENST00000631057 TBC1D3CQ6IPX1 549 aa7.54□□□□□ -1.2
GPC3-204ENST00000631057 FAM131AQ6UXB0 335 aa7.54□□□□□ -1.2
GPC3-204ENST00000631057 FRRS1Q6ZNA5 592 aa7.54□□□□□ -1.2
GPC3-204ENST00000631057 ZNF620Q6ZNG0 422 aa7.54□□□□□ -1.2
GPC3-204ENST00000631057 PRR23CQ6ZRP0 262 aa7.54□□□□□ -1.2
GPC3-204ENST00000631057 MBOAT2Q6ZWT7 520 aa7.54□□□□□ -1.2
GPC3-204ENST00000631057 MEX3DQ86XN8 651 aaKnown RBP7.54□□□□□ -1.2
GPC3-204ENST00000631057 RAB43Q86YS6 212 aa7.54□□□□□ -1.2
GPC3-204ENST00000631057 TBC1D3Q8IZP1 549 aaPredicted RBP7.54□□□□□ -1.2
GPC3-204ENST00000631057 GDPD1Q8N9F7 314 aa7.54□□□□□ -1.2
GPC3-204ENST00000631057 OR7G2Q8NG99 324 aa7.54□□□□□ -1.2
GPC3-204ENST00000631057 OR4E2Q8NGC2 313 aa7.54□□□□□ -1.2
GPC3-204ENST00000631057 OR4K14Q8NGD5 310 aa7.54□□□□□ -1.2
GPC3-204ENST00000631057 CDS1Q92903 461 aa7.54□□□□□ -1.2
GPC3-204ENST00000631057 ELSPBP1Q96BH3 223 aa7.54□□□□□ -1.2
GPC3-204ENST00000631057 C1GALT1C1Q96EU7 318 aa7.54□□□□□ -1.2
GPC3-204ENST00000631057 SLC41A3Q96GZ6 507 aa7.54□□□□□ -1.2
GPC3-204ENST00000631057 C10orf90Q96M02 699 aa7.54□□□□□ -1.2
GPC3-204ENST00000631057 SERINC2Q96SA4 455 aa7.54□□□□□ -1.2
GPC3-204ENST00000631057 CDCA3Q99618 268 aaPredicted RBP7.54□□□□□ -1.2
GPC3-204ENST00000631057 LMAN2LQ9H0V9 348 aa7.54□□□□□ -1.2
GPC3-204ENST00000631057 TPK1Q9H3S4 243 aa7.54□□□□□ -1.2
GPC3-204ENST00000631057 SRMSQ9H3Y6 488 aa7.54□□□□□ -1.2
GPC3-204ENST00000631057 SYNDIG1Q9H7V2 258 aa7.54□□□□□ -1.2
GPC3-204ENST00000631057 ANKRA2Q9H9E1 313 aa7.54□□□□□ -1.2
GPC3-204ENST00000631057 TOR4AQ9NXH8 423 aa7.54□□□□□ -1.2
GPC3-204ENST00000631057 IL20Q9NYY1 176 aa7.54□□□□□ -1.2
GPC3-204ENST00000631057 NLGN3Q9NZ94 848 aa7.54□□□□□ -1.2
GPC3-204ENST00000631057 PTGFRNQ9P2B2 879 aa7.54□□□□□ -1.2
GPC3-204ENST00000631057 KLF15Q9UIH9 416 aa7.54□□□□□ -1.2
GPC3-204ENST00000631057 SF3B6Q9Y3B4 125 aaKnown RBP7.54□□□□□ -1.2
GPC3-204ENST00000631057 WDR45Q9Y484 360 aa7.54□□□□□ -1.2
GPC3-204ENST00000631057 CDH10Q9Y6N8 788 aa7.54□□□□□ -1.2
GPC3-204ENST00000631057 TRDV1A0A1B0GX56 115 aa7.53□□□□□ -1.2
GPC3-204ENST00000631057 A0A1W2PQ09 198 aa7.53□□□□□ -1.2
GPC3-204ENST00000631057 HTR3EA5X5Y0 456 aa7.53□□□□□ -1.2
GPC3-204ENST00000631057 K7EQS6 105 aa7.53□□□□□ -1.2
GPC3-204ENST00000631057 BTN3A3O00478 584 aa7.53□□□□□ -1.2
GPC3-204ENST00000631057 SURF4O15260 269 aa7.53□□□□□ -1.2
GPC3-204ENST00000631057 SLC31A1O15431 190 aa7.53□□□□□ -1.2
GPC3-204ENST00000631057 KLF4O43474 513 aa7.53□□□□□ -1.2
GPC3-204ENST00000631057 AKAP8O43823 692 aaKnown RBP7.53□□□□□ -1.2
GPC3-204ENST00000631057 CCNKO75909 580 aa7.53□□□□□ -1.2
GPC3-204ENST00000631057 APOL3O95236 402 aa7.53□□□□□ -1.2
GPC3-204ENST00000631057 ZIC2O95409 532 aaPredicted RBP7.53□□□□□ -1.2
GPC3-204ENST00000631057 KRT8P05787 483 aa7.53□□□□□ -1.2
GPC3-204ENST00000631057 THBS1P07996 1170 aa7.53□□□□□ -1.2
GPC3-204ENST00000631057 MSL3P1P0C860 447 aa7.53□□□□□ -1.2
GPC3-204ENST00000631057 IL7P13232 177 aa7.53□□□□□ -1.2
GPC3-204ENST00000631057 HTR1FP30939 366 aa7.53□□□□□ -1.2
GPC3-204ENST00000631057 MAT2AP31153 395 aaKnown RBP7.53□□□□□ -1.2
GPC3-204ENST00000631057 SDC2P34741 201 aa7.53□□□□□ -1.2
GPC3-204ENST00000631057 TRHRP34981 398 aaPredicted RBP7.53□□□□□ -1.2
GPC3-204ENST00000631057 SLC1A3P43003 542 aa7.53□□□□□ -1.2
GPC3-204ENST00000631057 MAGEA10P43363 369 aaPredicted RBP7.53□□□□□ -1.2
GPC3-204ENST00000631057 GPR4P46093 362 aa7.53□□□□□ -1.2
GPC3-204ENST00000631057 PPP3R1P63098 170 aa7.53□□□□□ -1.2
GPC3-204ENST00000631057 MLLT1Q03111 559 aaPredicted RBP7.53□□□□□ -1.2
GPC3-204ENST00000631057 ACSM1Q08AH1 577 aa7.53□□□□□ -1.2
GPC3-204ENST00000631057 ASAH1Q13510 395 aa7.53□□□□□ -1.2
GPC3-204ENST00000631057 NFATC4Q14934 902 aa7.53□□□□□ -1.2
GPC3-204ENST00000631057 CARTPTQ16568 116 aa7.53□□□□□ -1.2
GPC3-204ENST00000631057 ARHGAP11BQ3KRB8 267 aa7.53□□□□□ -1.2
GPC3-204ENST00000631057 FLYWCH1Q4VC44 716 aa7.53□□□□□ -1.2
GPC3-204ENST00000631057 CLEC12AQ5QGZ9 265 aa7.53□□□□□ -1.2
GPC3-204ENST00000631057 PDZK1Q5T2W1 519 aa7.53□□□□□ -1.2
GPC3-204ENST00000631057 AADACL4Q5VUY2 407 aa7.53□□□□□ -1.2
GPC3-204ENST00000631057 RSBN1Q5VWQ0 802 aaPredicted RBP7.53□□□□□ -1.2
GPC3-204ENST00000631057 TYW3Q6IPR3 259 aaKnown RBP7.53□□□□□ -1.2
GPC3-204ENST00000631057 SLC30A6Q6NXT4 461 aa7.53□□□□□ -1.2
GPC3-204ENST00000631057 CD200R1LQ6Q8B3 271 aa7.53□□□□□ -1.2
GPC3-204ENST00000631057 FAM111BQ6SJ93 734 aa7.53□□□□□ -1.2
GPC3-204ENST00000631057 ZNF517Q6ZMY9 492 aaPredicted RBP7.53□□□□□ -1.2
GPC3-204ENST00000631057 ZNF836Q6ZNA1 936 aa7.53□□□□□ -1.2
GPC3-204ENST00000631057 GDF7Q7Z4P5 450 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 123.3 ms