RNA–Protein interactions for RNA: ENST00000590301.1

NPC1-208, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 410 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-208ENST00000590301 LMF2Q9BU23 707 aaKnown RBP6.89□□□□□ -1.31
NPC1-208ENST00000590301 CXXC4Q9H2H0 198 aa6.89□□□□□ -1.31
NPC1-208ENST00000590301 GLIPR2Q9H4G4 154 aa6.89□□□□□ -1.31
NPC1-208ENST00000590301 EML4Q9HC35 981 aaKnown RBP6.89□□□□□ -1.31
NPC1-208ENST00000590301 ACSS1Q9NUB1 689 aaPredicted RBP6.89□□□□□ -1.31
NPC1-208ENST00000590301 NTMQ9P121 344 aa6.89□□□□□ -1.31
NPC1-208ENST00000590301 PPP4R1LQ9P1A2 415 aa6.89□□□□□ -1.31
NPC1-208ENST00000590301 CLCF1Q9UBD9 225 aa6.89□□□□□ -1.31
NPC1-208ENST00000590301 STOML1Q9UBI4 398 aa6.89□□□□□ -1.31
NPC1-208ENST00000590301 FBXL2Q9UKC9 423 aa6.89□□□□□ -1.31
NPC1-208ENST00000590301 PACSIN3Q9UKS6 424 aa6.89□□□□□ -1.31
NPC1-208ENST00000590301 ZNF175Q9Y473 711 aa6.89□□□□□ -1.31
NPC1-208ENST00000590301 CCL27Q9Y4X3 112 aa6.89□□□□□ -1.31
NPC1-208ENST00000590301 POLR3HQ9Y535 204 aaPredicted RBP6.89□□□□□ -1.31
NPC1-208ENST00000590301 SETD2Q9BYW2 2564 aaPredicted RBP6.89□□□□□ -1.31
NPC1-208ENST00000590301 A0A087WZY1 265 aa6.88□□□□□ -1.31
NPC1-208ENST00000590301 SMIM23A6NLE4 172 aa6.88□□□□□ -1.31
NPC1-208ENST00000590301 CLCA1A8K7I4 914 aa6.88□□□□□ -1.31
NPC1-208ENST00000590301 TMEM114B3SHH9 223 aa6.88□□□□□ -1.31
NPC1-208ENST00000590301 MSTNO14793 375 aa6.88□□□□□ -1.31
NPC1-208ENST00000590301 NPHS1O60500 1241 aa6.88□□□□□ -1.31
NPC1-208ENST00000590301 TRIM13O60858 407 aa6.88□□□□□ -1.31
NPC1-208ENST00000590301 TNFRSF21O75509 655 aa6.88□□□□□ -1.31
NPC1-208ENST00000590301 SOX30O94993 753 aa6.88□□□□□ -1.31
NPC1-208ENST00000590301 FGF4P08620 206 aa6.88□□□□□ -1.31
NPC1-208ENST00000590301 NUDT17P0C025 328 aa6.88□□□□□ -1.31
NPC1-208ENST00000590301 PRPS2P11908 318 aa6.88□□□□□ -1.31
NPC1-208ENST00000590301 FCGR2AP12318 317 aa6.88□□□□□ -1.31
NPC1-208ENST00000590301 DNASE1P24855 282 aa6.88□□□□□ -1.31
NPC1-208ENST00000590301 TACR1P25103 407 aa6.88□□□□□ -1.31
NPC1-208ENST00000590301 GPC1P35052 558 aa6.88□□□□□ -1.31
NPC1-208ENST00000590301 ART1P52961 327 aa6.88□□□□□ -1.31
NPC1-208ENST00000590301 WNT3P56703 355 aa6.88□□□□□ -1.31
NPC1-208ENST00000590301 CLDN18P56856 261 aa6.88□□□□□ -1.31
NPC1-208ENST00000590301 PRR5P85299 388 aa6.88□□□□□ -1.31
NPC1-208ENST00000590301 SRYQ05066 204 aa6.88□□□□□ -1.31
NPC1-208ENST00000590301 C17orf67Q0P5P2 114 aa6.88□□□□□ -1.31
NPC1-208ENST00000590301 PDE7AQ13946 482 aa6.88□□□□□ -1.31
NPC1-208ENST00000590301 SH2D4BQ5SQS7 431 aa6.88□□□□□ -1.31
NPC1-208ENST00000590301 KANK2Q63ZY3 851 aa6.88□□□□□ -1.31
NPC1-208ENST00000590301 ZCCHC12Q6PEW1 402 aa6.88□□□□□ -1.31
NPC1-208ENST00000590301 LRIG3Q6UXM1 1119 aa6.88□□□□□ -1.31
NPC1-208ENST00000590301 GSPT2Q8IYD1 628 aaKnown RBP6.88□□□□□ -1.31
NPC1-208ENST00000590301 NATD1Q8N6N6 113 aa6.88□□□□□ -1.31
NPC1-208ENST00000590301 CDRT4Q8N9R6 151 aa6.88□□□□□ -1.31
NPC1-208ENST00000590301 OR2M3Q8NG83 312 aa6.88□□□□□ -1.31
NPC1-208ENST00000590301 OR4N2Q8NGD1 307 aa6.88□□□□□ -1.31
NPC1-208ENST00000590301 HOXB13Q92826 284 aaPredicted RBP6.88□□□□□ -1.31
NPC1-208ENST00000590301 PPCDCQ96CD2 204 aa6.88□□□□□ -1.31
NPC1-208ENST00000590301 MBD6Q96DN6 1003 aa6.88□□□□□ -1.31
NPC1-208ENST00000590301 APOPT1Q96IL0 206 aa6.88□□□□□ -1.31
NPC1-208ENST00000590301 DACH2Q96NX9 599 aa6.88□□□□□ -1.31
NPC1-208ENST00000590301 PIGQQ9BRB3 760 aa6.88□□□□□ -1.31
NPC1-208ENST00000590301 GPATCH1Q9BRR8 931 aaKnown RBP6.88□□□□□ -1.31
NPC1-208ENST00000590301 G6PC3Q9BUM1 346 aa6.88□□□□□ -1.31
NPC1-208ENST00000590301 RBM24Q9BX46 236 aaKnown RBP6.88□□□□□ -1.31
NPC1-208ENST00000590301 TBL1XR1Q9BZK7 514 aa6.88□□□□□ -1.31
NPC1-208ENST00000590301 REEP4Q9H6H4 257 aa6.88□□□□□ -1.31
NPC1-208ENST00000590301 ANKRA2Q9H9E1 313 aa6.88□□□□□ -1.31
NPC1-208ENST00000590301 ST6GALNAC2Q9UJ37 374 aa6.88□□□□□ -1.31
NPC1-208ENST00000590301 F8P00451 2351 aa6.88□□□□□ -1.31
NPC1-208ENST00000590301 CACNA1DQ01668 2161 aa6.87□□□□□ -1.31
NPC1-208ENST00000590301 A0A1W2PNV4 684 aa6.87□□□□□ -1.31
NPC1-208ENST00000590301 C7orf72A4D263 438 aa6.87□□□□□ -1.31
NPC1-208ENST00000590301 SLC22A20A6NK97 555 aa6.87□□□□□ -1.31
NPC1-208ENST00000590301 A8MXE2 369 aa6.87□□□□□ -1.31
NPC1-208ENST00000590301 KDM4EB2RXH2 506 aaPredicted RBP6.87□□□□□ -1.31
NPC1-208ENST00000590301 LSM1O15116 133 aaKnown RBP6.87□□□□□ -1.31
NPC1-208ENST00000590301 SCO2O43819 266 aa6.87□□□□□ -1.31
NPC1-208ENST00000590301 ZNF500O60304 480 aaPredicted RBP6.87□□□□□ -1.31
NPC1-208ENST00000590301 NKX2-2O95096 273 aa6.87□□□□□ -1.31
NPC1-208ENST00000590301 UTS2O95399 124 aa6.87□□□□□ -1.31
NPC1-208ENST00000590301 ZNF17P17021 662 aa6.87□□□□□ -1.31
NPC1-208ENST00000590301 SDC1P18827 310 aa6.87□□□□□ -1.31
NPC1-208ENST00000590301 HK1P19367 917 aa6.87□□□□□ -1.31
NPC1-208ENST00000590301 GABRA3P34903 492 aa6.87□□□□□ -1.31
NPC1-208ENST00000590301 HPCAL1P37235 193 aa6.87□□□□□ -1.31
NPC1-208ENST00000590301 MAP3K8P41279 467 aa6.87□□□□□ -1.31
NPC1-208ENST00000590301 FRKP42685 505 aaPredicted RBP6.87□□□□□ -1.31
NPC1-208ENST00000590301 CPA2P48052 419 aa6.87□□□□□ -1.31
NPC1-208ENST00000590301 IST1P53990 364 aa6.87□□□□□ -1.31
NPC1-208ENST00000590301 MANFP55145 182 aaKnown RBP6.87□□□□□ -1.31
NPC1-208ENST00000590301 B3GALT5-AS1P59052 145 aa6.87□□□□□ -1.31
NPC1-208ENST00000590301 RPS3AP61247 264 aaKnown RBP6.87□□□□□ -1.31
NPC1-208ENST00000590301 IFFO1Q0D2I5 559 aa6.87□□□□□ -1.31
NPC1-208ENST00000590301 PCLAFQ15004 111 aa6.87□□□□□ -1.31
NPC1-208ENST00000590301 MLC1Q15049 377 aa6.87□□□□□ -1.31
NPC1-208ENST00000590301 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.87□□□□□ -1.31
NPC1-208ENST00000590301 RAET1LQ5VY80 246 aa6.87□□□□□ -1.31
NPC1-208ENST00000590301 FAM219BQ5XKK7 198 aa6.87□□□□□ -1.31
NPC1-208ENST00000590301 FBXW10Q5XX13 1052 aa6.87□□□□□ -1.31
NPC1-208ENST00000590301 CLEC6AQ6EIG7 209 aa6.87□□□□□ -1.31
NPC1-208ENST00000590301 OR5M10Q6IEU7 315 aa6.87□□□□□ -1.31
NPC1-208ENST00000590301 PAMR1Q6UXH9 720 aa6.87□□□□□ -1.31
NPC1-208ENST00000590301 Q6ZSR9 355 aa6.87□□□□□ -1.31
NPC1-208ENST00000590301 P4HA3Q7Z4N8 544 aa6.87□□□□□ -1.31
NPC1-208ENST00000590301 CDC20BQ86Y33 519 aa6.87□□□□□ -1.31
NPC1-208ENST00000590301 MISPQ8IVT2 679 aa6.87□□□□□ -1.31
NPC1-208ENST00000590301 C10orf107Q8IVU9 208 aa6.87□□□□□ -1.31
NPC1-208ENST00000590301 C4orf33Q8N1A6 199 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 167.4 ms