RNA–Protein interactions for RNA: ENST00000584960.1

RIOK3-210, Transcript of RIO kinase 3, humanhuman

TSL 2

Gene RIOK3, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-210ENST00000584960 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.57□□□□□ -0.24
RIOK3-210ENST00000584960 ZFYVE26Q68DK2 2539 aa13.57□□□□□ -0.24
RIOK3-210ENST00000584960 PRAMEF25A6NGN4 478 aa13.56□□□□□ -0.24
RIOK3-210ENST00000584960 FADS1O60427 444 aa13.56□□□□□ -0.24
RIOK3-210ENST00000584960 ICOSLGO75144 302 aa13.56□□□□□ -0.24
RIOK3-210ENST00000584960 UNC5CO95185 931 aa13.56□□□□□ -0.24
RIOK3-210ENST00000584960 UTS2O95399 124 aa13.56□□□□□ -0.24
RIOK3-210ENST00000584960 IGKV1D-16P01601 117 aa13.56□□□□□ -0.24
RIOK3-210ENST00000584960 HPGDP15428 266 aa13.56□□□□□ -0.24
RIOK3-210ENST00000584960 ENDOUP21128 410 aaKnown RBP13.56□□□□□ -0.24
RIOK3-210ENST00000584960 TBXA2RP21731 343 aa13.56□□□□□ -0.24
RIOK3-210ENST00000584960 RFX3P48380 749 aa13.56□□□□□ -0.24
RIOK3-210ENST00000584960 MEOX1P50221 254 aa13.56□□□□□ -0.24
RIOK3-210ENST00000584960 DSTNP60981 165 aa13.56□□□□□ -0.24
RIOK3-210ENST00000584960 KCNJ2P63252 427 aa13.56□□□□□ -0.24
RIOK3-210ENST00000584960 INPP5JQ15735 1006 aaPredicted RBP13.56□□□□□ -0.24
RIOK3-210ENST00000584960 HYAL4Q2M3T9 481 aa13.56□□□□□ -0.24
RIOK3-210ENST00000584960 GTDC1Q4AE62 458 aa13.56□□□□□ -0.24
RIOK3-210ENST00000584960 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.56□□□□□ -0.24
RIOK3-210ENST00000584960 REP15Q6BDI9 236 aa13.56□□□□□ -0.24
RIOK3-210ENST00000584960 FIGNL1Q6PIW4 674 aa13.56□□□□□ -0.24
RIOK3-210ENST00000584960 BNC2Q6ZN30 1099 aaPredicted RBP13.56□□□□□ -0.24
RIOK3-210ENST00000584960 MSRB3Q8IXL7 192 aa13.56□□□□□ -0.24
RIOK3-210ENST00000584960 RAB8BQ92930 207 aa13.56□□□□□ -0.24
RIOK3-210ENST00000584960 TRNT1Q96Q11 434 aaKnown RBP13.56□□□□□ -0.24
RIOK3-210ENST00000584960 DOHHQ9BU89 302 aa13.56□□□□□ -0.24
RIOK3-210ENST00000584960 OSBPL11Q9BXB4 747 aa13.56□□□□□ -0.24
RIOK3-210ENST00000584960 HES7Q9BYE0 225 aa13.56□□□□□ -0.24
RIOK3-210ENST00000584960 SAP130Q9H0E3 1048 aa13.56□□□□□ -0.24
RIOK3-210ENST00000584960 IL1RL2Q9HB29 575 aa13.56□□□□□ -0.24
RIOK3-210ENST00000584960 DEPPQ9NTK1 212 aa13.56□□□□□ -0.24
RIOK3-210ENST00000584960 KLRF1Q9NZS2 232 aa13.56□□□□□ -0.24
RIOK3-210ENST00000584960 P2RX2Q9UBL9 471 aa13.56□□□□□ -0.24
RIOK3-210ENST00000584960 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.56□□□□□ -0.24
RIOK3-210ENST00000584960 AP3M1Q9Y2T2 418 aa13.56□□□□□ -0.24
RIOK3-210ENST00000584960 KCNE3Q9Y6H6 103 aa13.56□□□□□ -0.24
RIOK3-210ENST00000584960 BSNQ9UPA5 3926 aa13.56□□□□□ -0.24
RIOK3-210ENST00000584960 A0A1W2PQD3 144 aa13.55□□□□□ -0.24
RIOK3-210ENST00000584960 ALG1L2C9J202 215 aa13.55□□□□□ -0.24
RIOK3-210ENST00000584960 ACOT7O00154 380 aa13.55□□□□□ -0.24
RIOK3-210ENST00000584960 SCDO00767 359 aa13.55□□□□□ -0.24
RIOK3-210ENST00000584960 TRIM3O75382 744 aaPredicted RBP13.55□□□□□ -0.24
RIOK3-210ENST00000584960 ELAVL4P26378 380 aaKnown RBP13.55□□□□□ -0.24
RIOK3-210ENST00000584960 EVI2BP34910 448 aa13.55□□□□□ -0.24
RIOK3-210ENST00000584960 MNAT1P51948 309 aa13.55□□□□□ -0.24
RIOK3-210ENST00000584960 ATP12AP54707 1039 aa13.55□□□□□ -0.24
RIOK3-210ENST00000584960 HPCAP84074 193 aa13.55□□□□□ -0.24
RIOK3-210ENST00000584960 C19orf57Q0VDD7 668 aa13.55□□□□□ -0.24
RIOK3-210ENST00000584960 COX20Q5RI15 118 aa13.55□□□□□ -0.24
RIOK3-210ENST00000584960 PRAMEF20Q5VT98 475 aa13.55□□□□□ -0.24
RIOK3-210ENST00000584960 PRAMEF8Q5VWM4 474 aa13.55□□□□□ -0.24
RIOK3-210ENST00000584960 PRAMEF7Q5VXH5 474 aa13.55□□□□□ -0.24
RIOK3-210ENST00000584960 HACD2Q6Y1H2 254 aa13.55□□□□□ -0.24
RIOK3-210ENST00000584960 LRRC74BQ6ZQY2 392 aa13.55□□□□□ -0.24
RIOK3-210ENST00000584960 SLC22A16Q86VW1 577 aa13.55□□□□□ -0.24
RIOK3-210ENST00000584960 TREML1Q86YW5 311 aa13.55□□□□□ -0.24
RIOK3-210ENST00000584960 MISPQ8IVT2 679 aa13.55□□□□□ -0.24
RIOK3-210ENST00000584960 CISD2Q8N5K1 135 aaKnown RBP13.55□□□□□ -0.24
RIOK3-210ENST00000584960 OR8J3Q8NGG0 315 aa13.55□□□□□ -0.24
RIOK3-210ENST00000584960 PNPT1Q8TCS8 783 aaKnown RBP13.55□□□□□ -0.24
RIOK3-210ENST00000584960 SNRNP40Q96DI7 357 aaKnown RBP13.55□□□□□ -0.24
RIOK3-210ENST00000584960 OTUB1Q96FW1 271 aaPredicted RBP13.55□□□□□ -0.24
RIOK3-210ENST00000584960 AURKBQ96GD4 344 aaPredicted RBP13.55□□□□□ -0.24
RIOK3-210ENST00000584960 ZNF597Q96LX8 424 aa13.55□□□□□ -0.24
RIOK3-210ENST00000584960 BARD1Q99728 777 aaKnown RBP13.55□□□□□ -0.24
RIOK3-210ENST00000584960 THUMPD3Q9BV44 507 aaKnown RBP13.55□□□□□ -0.24
RIOK3-210ENST00000584960 TBL1XR1Q9BZK7 514 aa13.55□□□□□ -0.24
RIOK3-210ENST00000584960 ZNF350Q9GZX5 532 aa13.55□□□□□ -0.24
RIOK3-210ENST00000584960 PROK2Q9HC23 129 aa13.55□□□□□ -0.24
RIOK3-210ENST00000584960 ZFP64Q9NPA5 681 aa13.55□□□□□ -0.24
RIOK3-210ENST00000584960 QPCTLQ9NXS2 382 aa13.55□□□□□ -0.24
RIOK3-210ENST00000584960 WDR45Q9Y484 360 aa13.55□□□□□ -0.24
RIOK3-210ENST00000584960 C15orf38-AP3S2A0A0A6YYH1 394 aa13.54□□□□□ -0.24
RIOK3-210ENST00000584960 NR2F1P10589 423 aa13.54□□□□□ -0.24
RIOK3-210ENST00000584960 ETFAP13804 333 aa13.54□□□□□ -0.24
RIOK3-210ENST00000584960 DNASE1L1P49184 302 aa13.54□□□□□ -0.24
RIOK3-210ENST00000584960 CASP9P55211 416 aa13.54□□□□□ -0.24
RIOK3-210ENST00000584960 GPR85P60893 370 aa13.54□□□□□ -0.24
RIOK3-210ENST00000584960 ALDH6A1Q02252 535 aaKnown RBP13.54□□□□□ -0.24
RIOK3-210ENST00000584960 PLGLB1Q02325 96 aa13.54□□□□□ -0.24
RIOK3-210ENST00000584960 C17orf67Q0P5P2 114 aa13.54□□□□□ -0.24
RIOK3-210ENST00000584960 FOXO1Q12778 655 aa13.54□□□□□ -0.24
RIOK3-210ENST00000584960 ART3Q13508 389 aa13.54□□□□□ -0.24
RIOK3-210ENST00000584960 KRT72Q14CN4 511 aa13.54□□□□□ -0.24
RIOK3-210ENST00000584960 FLYWCH1Q4VC44 716 aa13.54□□□□□ -0.24
RIOK3-210ENST00000584960 GPAT3Q53EU6 434 aa13.54□□□□□ -0.24
RIOK3-210ENST00000584960 KRTCAP3Q53RY4 240 aa13.54□□□□□ -0.24
RIOK3-210ENST00000584960 TIGD3Q6B0B8 471 aa13.54□□□□□ -0.24
RIOK3-210ENST00000584960 NANOGP8Q6NSW7 305 aa13.54□□□□□ -0.24
RIOK3-210ENST00000584960 ARPINQ7Z6K5 226 aa13.54□□□□□ -0.24
RIOK3-210ENST00000584960 OR4C3Q8NH37 302 aa13.54□□□□□ -0.24
RIOK3-210ENST00000584960 CPT1CQ8TCG5 803 aa13.54□□□□□ -0.24
RIOK3-210ENST00000584960 GRHL3Q8TE85 626 aa13.54□□□□□ -0.24
RIOK3-210ENST00000584960 FAR1Q8WVX9 515 aa13.54□□□□□ -0.24
RIOK3-210ENST00000584960 RCN3Q96D15 328 aa13.54□□□□□ -0.24
RIOK3-210ENST00000584960 TAAR6Q96RI8 345 aa13.54□□□□□ -0.24
RIOK3-210ENST00000584960 HOPXQ9BPY8 73 aaPredicted RBP13.54□□□□□ -0.24
RIOK3-210ENST00000584960 CPPED1Q9BRF8 314 aaPredicted RBP13.54□□□□□ -0.24
RIOK3-210ENST00000584960 SPATA9Q9BWV2 254 aa13.54□□□□□ -0.24
RIOK3-210ENST00000584960 TMEM38AQ9H6F2 299 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms