RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 ZPLD1Q8TCW7 415 aa11.53□□□□□ -0.56
NPLOC4-213ENST00000573519 MGARPQ8TDB4 240 aa11.53□□□□□ -0.56
NPLOC4-213ENST00000573519 RMND5BQ96G75 393 aaPredicted RBP11.53□□□□□ -0.56
NPLOC4-213ENST00000573519 PPP1R36Q96LQ0 422 aa11.53□□□□□ -0.56
NPLOC4-213ENST00000573519 TBL1XR1Q9BZK7 514 aa11.53□□□□□ -0.56
NPLOC4-213ENST00000573519 C20orf27Q9GZN8 174 aa11.53□□□□□ -0.56
NPLOC4-213ENST00000573519 CALHM2Q9HA72 323 aa11.53□□□□□ -0.56
NPLOC4-213ENST00000573519 SLC24A3Q9HC58 644 aa11.53□□□□□ -0.56
NPLOC4-213ENST00000573519 MED11Q9P086 117 aa11.53□□□□□ -0.56
NPLOC4-213ENST00000573519 ZNF629Q9UEG4 869 aaPredicted RBP11.53□□□□□ -0.56
NPLOC4-213ENST00000573519 KCNN3Q9UGI6 736 aa11.53□□□□□ -0.56
NPLOC4-213ENST00000573519 ACTL7BQ9Y614 415 aa11.53□□□□□ -0.56
NPLOC4-213ENST00000573519 NINQ8N4C6 2090 aa11.53□□□□□ -0.56
NPLOC4-213ENST00000573519 MBD3L4A6NDZ8 208 aaPredicted RBP11.52□□□□□ -0.57
NPLOC4-213ENST00000573519 MBD3L3A6NE82 208 aaPredicted RBP11.52□□□□□ -0.57
NPLOC4-213ENST00000573519 MBD3L5A6NJ08 208 aaPredicted RBP11.52□□□□□ -0.57
NPLOC4-213ENST00000573519 CLCA1A8K7I4 914 aa11.52□□□□□ -0.57
NPLOC4-213ENST00000573519 BIRC5O15392 142 aa11.52□□□□□ -0.57
NPLOC4-213ENST00000573519 FADS1O60427 444 aa11.52□□□□□ -0.57
NPLOC4-213ENST00000573519 TBX19O60806 448 aa11.52□□□□□ -0.57
NPLOC4-213ENST00000573519 UTS2O95399 124 aa11.52□□□□□ -0.57
NPLOC4-213ENST00000573519 TMIGD3P0DMS9 266 aaPredicted RBP11.52□□□□□ -0.57
NPLOC4-213ENST00000573519 HK1P19367 917 aa11.52□□□□□ -0.57
NPLOC4-213ENST00000573519 CTSSP25774 331 aa11.52□□□□□ -0.57
NPLOC4-213ENST00000573519 KIR2DL3P43628 341 aa11.52□□□□□ -0.57
NPLOC4-213ENST00000573519 DSCR4P56555 118 aaPredicted RBP11.52□□□□□ -0.57
NPLOC4-213ENST00000573519 MAGOHP61326 146 aaKnown RBP11.52□□□□□ -0.57
NPLOC4-213ENST00000573519 PDE7AQ13946 482 aa11.52□□□□□ -0.57
NPLOC4-213ENST00000573519 XKR7Q5GH72 579 aa11.52□□□□□ -0.57
NPLOC4-213ENST00000573519 RAET1LQ5VY80 246 aa11.52□□□□□ -0.57
NPLOC4-213ENST00000573519 MARCH3Q86UD3 253 aa11.52□□□□□ -0.57
NPLOC4-213ENST00000573519 CDH24Q86UP0 819 aa11.52□□□□□ -0.57
NPLOC4-213ENST00000573519 UBQLNLQ8IYU4 475 aa11.52□□□□□ -0.57
NPLOC4-213ENST00000573519 ZNF781Q8N8C0 355 aa11.52□□□□□ -0.57
NPLOC4-213ENST00000573519 CDRT4Q8N9R6 151 aa11.52□□□□□ -0.57
NPLOC4-213ENST00000573519 C9orf106Q8NAJ2 232 aa11.52□□□□□ -0.57
NPLOC4-213ENST00000573519 FNDC5Q8NAU1 212 aa11.52□□□□□ -0.57
NPLOC4-213ENST00000573519 OR2M3Q8NG83 312 aa11.52□□□□□ -0.57
NPLOC4-213ENST00000573519 CEP70Q8NHQ1 597 aa11.52□□□□□ -0.57
NPLOC4-213ENST00000573519 MBD3L2Q8NHZ7 208 aaPredicted RBP11.52□□□□□ -0.57
NPLOC4-213ENST00000573519 DUSP19Q8WTR2 217 aa11.52□□□□□ -0.57
NPLOC4-213ENST00000573519 NUDT8Q8WV74 236 aa11.52□□□□□ -0.57
NPLOC4-213ENST00000573519 RNF138Q8WVD3 245 aa11.52□□□□□ -0.57
NPLOC4-213ENST00000573519 JADE3Q92613 823 aa11.52□□□□□ -0.57
NPLOC4-213ENST00000573519 MTERF3Q96E29 417 aa11.52□□□□□ -0.57
NPLOC4-213ENST00000573519 OTUB1Q96FW1 271 aaPredicted RBP11.52□□□□□ -0.57
NPLOC4-213ENST00000573519 CHMP6Q96FZ7 201 aa11.52□□□□□ -0.57
NPLOC4-213ENST00000573519 ZNF764Q96H86 408 aaPredicted RBP11.52□□□□□ -0.57
NPLOC4-213ENST00000573519 MS4A4EQ96PG1 132 aa11.52□□□□□ -0.57
NPLOC4-213ENST00000573519 YIPF4Q9BSR8 244 aa11.52□□□□□ -0.57
NPLOC4-213ENST00000573519 PTGES2Q9H7Z7 377 aa11.52□□□□□ -0.57
NPLOC4-213ENST00000573519 FAM120CQ9NX05 1096 aaKnown RBP11.52□□□□□ -0.57
NPLOC4-213ENST00000573519 ABCG2Q9UNQ0 655 aa11.52□□□□□ -0.57
NPLOC4-213ENST00000573519 L3MBTL1Q9Y468 752 aa11.52□□□□□ -0.57
NPLOC4-213ENST00000573519 SNX8Q9Y5X2 465 aa11.52□□□□□ -0.57
NPLOC4-213ENST00000573519 CACNA1CQ13936 2221 aa11.52□□□□□ -0.57
NPLOC4-213ENST00000573519 PCNX1Q96RV3 2341 aa11.52□□□□□ -0.57
NPLOC4-213ENST00000573519 HCFC1P51610 2035 aa11.52□□□□□ -0.57
NPLOC4-213ENST00000573519 TMEM120BA0PK00 339 aa11.51□□□□□ -0.57
NPLOC4-213ENST00000573519 TTC36A6NLP5 189 aa11.51□□□□□ -0.57
NPLOC4-213ENST00000573519 B4DXG7 233 aa11.51□□□□□ -0.57
NPLOC4-213ENST00000573519 SCAMP2O15127 329 aaKnown RBP11.51□□□□□ -0.57
NPLOC4-213ENST00000573519 EMC8O43402 210 aa11.51□□□□□ -0.57
NPLOC4-213ENST00000573519 ZIC3O60481 467 aa11.51□□□□□ -0.57
NPLOC4-213ENST00000573519 IFI6P09912 130 aa11.51□□□□□ -0.57
NPLOC4-213ENST00000573519 POU3F2P20265 443 aaPredicted RBP11.51□□□□□ -0.57
NPLOC4-213ENST00000573519 CHMP24386 653 aa11.51□□□□□ -0.57
NPLOC4-213ENST00000573519 OPRM1P35372 400 aa11.51□□□□□ -0.57
NPLOC4-213ENST00000573519 RPL3P39023 403 aaKnown RBP11.51□□□□□ -0.57
NPLOC4-213ENST00000573519 FRKP42685 505 aaPredicted RBP11.51□□□□□ -0.57
NPLOC4-213ENST00000573519 SLC1A6P48664 564 aa11.51□□□□□ -0.57
NPLOC4-213ENST00000573519 LHX2P50458 406 aa11.51□□□□□ -0.57
NPLOC4-213ENST00000573519 WDR4P57081 412 aaKnown RBP11.51□□□□□ -0.57
NPLOC4-213ENST00000573519 PTGR1Q14914 329 aa11.51□□□□□ -0.57
NPLOC4-213ENST00000573519 PDCD2Q16342 344 aaPredicted RBP11.51□□□□□ -0.57
NPLOC4-213ENST00000573519 GRAMD1BQ3KR37 738 aa11.51□□□□□ -0.57
NPLOC4-213ENST00000573519 C6orf136Q5SQH8 315 aa11.51□□□□□ -0.57
NPLOC4-213ENST00000573519 HHATQ5VTY9 493 aa11.51□□□□□ -0.57
NPLOC4-213ENST00000573519 IL23RQ5VWK5 629 aa11.51□□□□□ -0.57
NPLOC4-213ENST00000573519 FIGNL1Q6PIW4 674 aa11.51□□□□□ -0.57
NPLOC4-213ENST00000573519 CHMP1BQ7LBR1 199 aa11.51□□□□□ -0.57
NPLOC4-213ENST00000573519 P4HA3Q7Z4N8 544 aa11.51□□□□□ -0.57
NPLOC4-213ENST00000573519 GRAMD2AQ8IUY3 354 aa11.51□□□□□ -0.57
NPLOC4-213ENST00000573519 FADS6Q8N9I5 356 aa11.51□□□□□ -0.57
NPLOC4-213ENST00000573519 OR7A2PQ8NGA2 310 aa11.51□□□□□ -0.57
NPLOC4-213ENST00000573519 OR5M1Q8NGP8 315 aa11.51□□□□□ -0.57
NPLOC4-213ENST00000573519 RNASE6Q93091 150 aaKnown RBP11.51□□□□□ -0.57
NPLOC4-213ENST00000573519 TUBGCP3Q96CW5 907 aa11.51□□□□□ -0.57
NPLOC4-213ENST00000573519 SORT1Q99523 831 aa11.51□□□□□ -0.57
NPLOC4-213ENST00000573519 TM9SF2Q99805 663 aa11.51□□□□□ -0.57
NPLOC4-213ENST00000573519 SH3GL2Q99962 352 aa11.51□□□□□ -0.57
NPLOC4-213ENST00000573519 RTN4RQ9BZR6 473 aa11.51□□□□□ -0.57
NPLOC4-213ENST00000573519 TMBIM4Q9HC24 238 aa11.51□□□□□ -0.57
NPLOC4-213ENST00000573519 ACSS1Q9NUB1 689 aaPredicted RBP11.51□□□□□ -0.57
NPLOC4-213ENST00000573519 ZCCHC3Q9NUD5 404 aaKnown RBP11.51□□□□□ -0.57
NPLOC4-213ENST00000573519 MRPS18CQ9Y3D5 142 aaKnown RBP11.51□□□□□ -0.57
NPLOC4-213ENST00000573519 CSMD2Q7Z408 3487 aa11.51□□□□□ -0.57
NPLOC4-213ENST00000573519 MYO9AB2RTY4 2548 aa11.51□□□□□ -0.57
NPLOC4-213ENST00000573519 DNAJC13O75165 2243 aa11.51□□□□□ -0.57
NPLOC4-213ENST00000573519 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 131.2 ms