RNA–Protein interactions for RNA: ENST00000557496.1

FOXN3-216, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-216ENST00000557496 OR2A12Q8NGT7 310 aa1.14□□□□□ -2.23
FOXN3-216ENST00000557496 SLC22A8Q8TCC7 542 aa1.14□□□□□ -2.23
FOXN3-216ENST00000557496 RAB39BQ96DA2 213 aa1.14□□□□□ -2.23
FOXN3-216ENST00000557496 EDEM3Q9BZQ6 932 aa1.14□□□□□ -2.23
FOXN3-216ENST00000557496 NARFLQ9H6Q4 476 aa1.14□□□□□ -2.23
FOXN3-216ENST00000557496 KAT8Q9H7Z6 458 aaKnown RBP1.14□□□□□ -2.23
FOXN3-216ENST00000557496 RNPEPL1Q9HAU8 725 aa1.14□□□□□ -2.23
FOXN3-216ENST00000557496 MAGEF1Q9HAY2 307 aa1.14□□□□□ -2.23
FOXN3-216ENST00000557496 ERVK-18Q9QC07 812 aa1.14□□□□□ -2.23
FOXN3-216ENST00000557496 MBD2Q9UBB5 411 aa1.14□□□□□ -2.23
FOXN3-216ENST00000557496 PTPRUQ92729 1446 aa1.14□□□□□ -2.23
FOXN3-216ENST00000557496 IGHV3-64DA0A0J9YX35 117 aa1.13□□□□□ -2.23
FOXN3-216ENST00000557496 H7C0S8 307 aa1.13□□□□□ -2.23
FOXN3-216ENST00000557496 ARPC1BO15143 372 aaKnown RBP1.13□□□□□ -2.23
FOXN3-216ENST00000557496 EFNA2O43921 213 aa1.13□□□□□ -2.23
FOXN3-216ENST00000557496 RAMP1O60894 148 aa1.13□□□□□ -2.23
FOXN3-216ENST00000557496 APOA4P06727 396 aa1.13□□□□□ -2.23
FOXN3-216ENST00000557496 SFTPBP07988 381 aa1.13□□□□□ -2.23
FOXN3-216ENST00000557496 GSTA1P08263 222 aa1.13□□□□□ -2.23
FOXN3-216ENST00000557496 ZNF14P17017 642 aaPredicted RBP1.13□□□□□ -2.23
FOXN3-216ENST00000557496 SERPINB6P35237 376 aa1.13□□□□□ -2.23
FOXN3-216ENST00000557496 RPS9P46781 194 aaKnown RBP1.13□□□□□ -2.23
FOXN3-216ENST00000557496 STARP49675 285 aa1.13□□□□□ -2.23
FOXN3-216ENST00000557496 CCR6P51684 374 aa1.13□□□□□ -2.23
FOXN3-216ENST00000557496 APOC4P55056 127 aa1.13□□□□□ -2.23
FOXN3-216ENST00000557496 ST8SIA6P61647 398 aa1.13□□□□□ -2.23
FOXN3-216ENST00000557496 RPS6P62753 249 aaKnown RBP1.13□□□□□ -2.23
FOXN3-216ENST00000557496 ZKSCAN8Q15776 578 aaPredicted RBP1.13□□□□□ -2.23
FOXN3-216ENST00000557496 CLPPQ16740 277 aaPredicted RBP1.13□□□□□ -2.23
FOXN3-216ENST00000557496 GPAT3Q53EU6 434 aa1.13□□□□□ -2.23
FOXN3-216ENST00000557496 ZSCAN25Q6NSZ9 544 aa1.13□□□□□ -2.23
FOXN3-216ENST00000557496 TUSC5Q8IXB3 177 aa1.13□□□□□ -2.23
FOXN3-216ENST00000557496 OR51G1Q8NGK1 321 aa1.13□□□□□ -2.23
FOXN3-216ENST00000557496 OR9A1PQ8NGU1 263 aa1.13□□□□□ -2.23
FOXN3-216ENST00000557496 DEPDC1BQ8WUY9 529 aa1.13□□□□□ -2.23
FOXN3-216ENST00000557496 TEKT1Q969V4 418 aa1.13□□□□□ -2.23
FOXN3-216ENST00000557496 RNF185Q96GF1 192 aa1.13□□□□□ -2.23
FOXN3-216ENST00000557496 TMEM80Q96HE8 168 aa1.13□□□□□ -2.23
FOXN3-216ENST00000557496 FUT8Q9BYC5 575 aa1.13□□□□□ -2.23
FOXN3-216ENST00000557496 ZNF350Q9GZX5 532 aa1.13□□□□□ -2.23
FOXN3-216ENST00000557496 ZDHHC11Q9H8X9 412 aa1.13□□□□□ -2.23
FOXN3-216ENST00000557496 SH2D2AQ9NP31 389 aa1.13□□□□□ -2.23
FOXN3-216ENST00000557496 FOXA2Q9Y261 457 aaPredicted RBP1.13□□□□□ -2.23
FOXN3-216ENST00000557496 IFT52Q9Y366 437 aa1.13□□□□□ -2.23
FOXN3-216ENST00000557496 MRPS2Q9Y399 296 aaKnown RBP1.13□□□□□ -2.23
FOXN3-216ENST00000557496 FCGBPQ9Y6R7 5405 aaPredicted RBP1.13□□□□□ -2.23
FOXN3-216ENST00000557496 THSD7BQ9C0I4 1608 aa1.12□□□□□ -2.23
FOXN3-216ENST00000557496 A8MUA0 341 aa1.12□□□□□ -2.23
FOXN3-216ENST00000557496 PES1O00541 588 aaKnown RBP1.12□□□□□ -2.23
FOXN3-216ENST00000557496 CHEK1O14757 476 aa1.12□□□□□ -2.23
FOXN3-216ENST00000557496 AIREO43918 545 aa1.12□□□□□ -2.23
FOXN3-216ENST00000557496 GMNNO75496 209 aa1.12□□□□□ -2.23
FOXN3-216ENST00000557496 RETP07949 1114 aa1.12□□□□□ -2.23
FOXN3-216ENST00000557496 IGFBP1P08833 259 aaPredicted RBP1.12□□□□□ -2.23
FOXN3-216ENST00000557496 ADORA2BP29275 332 aa1.12□□□□□ -2.23
FOXN3-216ENST00000557496 RPL29P47914 159 aaKnown RBP1.12□□□□□ -2.23
FOXN3-216ENST00000557496 TFPI2P48307 235 aa1.12□□□□□ -2.23
FOXN3-216ENST00000557496 SGSHP51688 502 aa1.12□□□□□ -2.23
FOXN3-216ENST00000557496 MAP2K1Q02750 393 aaPredicted RBP1.12□□□□□ -2.23
FOXN3-216ENST00000557496 KRTAP13-2Q52LG2 175 aa1.12□□□□□ -2.23
FOXN3-216ENST00000557496 LINC00483Q53H64 154 aa1.12□□□□□ -2.23
FOXN3-216ENST00000557496 SKA3Q8IX90 412 aa1.12□□□□□ -2.23
FOXN3-216ENST00000557496 OR8H2Q8N162 312 aa1.12□□□□□ -2.23
FOXN3-216ENST00000557496 GPR137Q96N19 417 aa1.12□□□□□ -2.23
FOXN3-216ENST00000557496 ZNF2Q9BSG1 426 aaPredicted RBP1.12□□□□□ -2.23
FOXN3-216ENST00000557496 NLNQ9BYT8 704 aa1.12□□□□□ -2.23
FOXN3-216ENST00000557496 TSPYL1Q9H0U9 437 aa1.12□□□□□ -2.23
FOXN3-216ENST00000557496 ZDHHC4Q9NPG8 344 aa1.12□□□□□ -2.23
FOXN3-216ENST00000557496 FANCFQ9NPI8 374 aa1.12□□□□□ -2.23
FOXN3-216ENST00000557496 RBAKQ9NYW8 714 aaPredicted RBP1.12□□□□□ -2.23
FOXN3-216ENST00000557496 SWAP70Q9UH65 585 aa1.12□□□□□ -2.23
FOXN3-216ENST00000557496 NARFQ9UHQ1 456 aa1.12□□□□□ -2.23
FOXN3-216ENST00000557496 PRPF19Q9UMS4 504 aaKnown RBP1.12□□□□□ -2.23
FOXN3-216ENST00000557496 ERVW-1Q9UQF0 538 aa1.12□□□□□ -2.23
FOXN3-216ENST00000557496 TP53TG5Q9Y2B4 290 aa1.12□□□□□ -2.23
FOXN3-216ENST00000557496 METP08581 1390 aa1.11□□□□□ -2.23
FOXN3-216ENST00000557496 C17orf51A8MQB3 221 aa1.11□□□□□ -2.23
FOXN3-216ENST00000557496 C19orf81C9J6K1 198 aa1.11□□□□□ -2.23
FOXN3-216ENST00000557496 ZNF264O43296 627 aa1.11□□□□□ -2.23
FOXN3-216ENST00000557496 AKR7A3O95154 331 aa1.11□□□□□ -2.23
FOXN3-216ENST00000557496 CHRNA1P02708 482 aa1.11□□□□□ -2.23
FOXN3-216ENST00000557496 IGKV4-1P06312 121 aa1.11□□□□□ -2.23
FOXN3-216ENST00000557496 HIST1H2AGP0C0S8 130 aaPredicted RBP1.11□□□□□ -2.23
FOXN3-216ENST00000557496 ADRB3P13945 408 aa1.11□□□□□ -2.23
FOXN3-216ENST00000557496 NTSP30990 170 aa1.11□□□□□ -2.23
FOXN3-216ENST00000557496 NPY2RP49146 381 aa1.11□□□□□ -2.23
FOXN3-216ENST00000557496 MRPS11P82912 194 aaKnown RBP1.11□□□□□ -2.23
FOXN3-216ENST00000557496 NUCB1Q02818 461 aa1.11□□□□□ -2.23
FOXN3-216ENST00000557496 ZNF699Q32M78 642 aa1.11□□□□□ -2.23
FOXN3-216ENST00000557496 CHRFAM7AQ494W8 412 aa1.11□□□□□ -2.23
FOXN3-216ENST00000557496 CFAP221Q4G0U5 840 aa1.11□□□□□ -2.23
FOXN3-216ENST00000557496 CCDC158Q5M9N0 1113 aa1.11□□□□□ -2.23
FOXN3-216ENST00000557496 NKAIN2Q5VXU1 208 aa1.11□□□□□ -2.23
FOXN3-216ENST00000557496 OR52W1Q6IF63 320 aa1.11□□□□□ -2.23
FOXN3-216ENST00000557496 CWC27Q6UX04 472 aaKnown RBP1.11□□□□□ -2.23
FOXN3-216ENST00000557496 DPY19L2P2Q6ZN68 376 aa1.11□□□□□ -2.23
FOXN3-216ENST00000557496 HOOK3Q86VS8 718 aa1.11□□□□□ -2.23
FOXN3-216ENST00000557496 HIST2H2ABQ8IUE6 130 aaPredicted RBP1.11□□□□□ -2.23
FOXN3-216ENST00000557496 PEX5LQ8IYB4 626 aa1.11□□□□□ -2.23
FOXN3-216ENST00000557496 TMEM252Q8N6L7 170 aa1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms