RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 TNIP2Q8NFZ5 429 aa11.72□□□□□ -0.53
HDAC1-209ENST00000484305 SLC9A6Q92581 669 aa11.72□□□□□ -0.53
HDAC1-209ENST00000484305 COQ8BQ96D53 544 aa11.72□□□□□ -0.53
HDAC1-209ENST00000484305 OTUB1Q96FW1 271 aaPredicted RBP11.72□□□□□ -0.53
HDAC1-209ENST00000484305 SPOCK3Q9BQ16 436 aa11.72□□□□□ -0.53
HDAC1-209ENST00000484305 YIPF4Q9BSR8 244 aa11.72□□□□□ -0.53
HDAC1-209ENST00000484305 TRIM8Q9BZR9 551 aa11.72□□□□□ -0.53
HDAC1-209ENST00000484305 ENKD1Q9H0I2 346 aa11.72□□□□□ -0.53
HDAC1-209ENST00000484305 DSN1Q9H410 356 aa11.72□□□□□ -0.53
HDAC1-209ENST00000484305 RUBCNLQ9H714 662 aa11.72□□□□□ -0.53
HDAC1-209ENST00000484305 NPDC1Q9NQX5 325 aaPredicted RBP11.72□□□□□ -0.53
HDAC1-209ENST00000484305 PNPOQ9NVS9 261 aa11.72□□□□□ -0.53
HDAC1-209ENST00000484305 FAM120CQ9NX05 1096 aaKnown RBP11.72□□□□□ -0.53
HDAC1-209ENST00000484305 ASIC5Q9NY37 505 aa11.72□□□□□ -0.53
HDAC1-209ENST00000484305 TAS2R10Q9NYW0 307 aa11.72□□□□□ -0.53
HDAC1-209ENST00000484305 NOP53Q9NZM5 478 aaKnown RBP11.72□□□□□ -0.53
HDAC1-209ENST00000484305 PPP4R1LQ9P1A2 415 aa11.72□□□□□ -0.53
HDAC1-209ENST00000484305 HAO1Q9UJM8 370 aa11.72□□□□□ -0.53
HDAC1-209ENST00000484305 MRTO4Q9UKD2 239 aaKnown RBP11.72□□□□□ -0.53
HDAC1-209ENST00000484305 EIF3LQ9Y262 564 aaKnown RBP11.72□□□□□ -0.53
HDAC1-209ENST00000484305 SNUPNO95149 360 aaKnown RBP11.71□□□□□ -0.53
HDAC1-209ENST00000484305 UTS2O95399 124 aa11.71□□□□□ -0.53
HDAC1-209ENST00000484305 C6orf47O95873 294 aa11.71□□□□□ -0.53
HDAC1-209ENST00000484305 DDX5P17844 614 aaKnown RBP11.71□□□□□ -0.53
HDAC1-209ENST00000484305 PRPS1L1P21108 318 aa11.71□□□□□ -0.53
HDAC1-209ENST00000484305 TCEA1P23193 301 aaKnown RBP11.71□□□□□ -0.53
HDAC1-209ENST00000484305 DPP4P27487 766 aa11.71□□□□□ -0.53
HDAC1-209ENST00000484305 MSX1P28360 303 aa11.71□□□□□ -0.53
HDAC1-209ENST00000484305 STARP49675 285 aa11.71□□□□□ -0.53
HDAC1-209ENST00000484305 PSMD4P55036 377 aaKnown RBP11.71□□□□□ -0.53
HDAC1-209ENST00000484305 DIO3P55073 304 aa11.71□□□□□ -0.53
HDAC1-209ENST00000484305 GFRA1P56159 465 aa11.71□□□□□ -0.53
HDAC1-209ENST00000484305 C21orf58P58505 322 aa11.71□□□□□ -0.53
HDAC1-209ENST00000484305 PRR5P85299 388 aa11.71□□□□□ -0.53
HDAC1-209ENST00000484305 STX5Q13190 355 aa11.71□□□□□ -0.53
HDAC1-209ENST00000484305 MAD2L1Q13257 205 aaPredicted RBP11.71□□□□□ -0.53
HDAC1-209ENST00000484305 DUSP5Q16690 384 aa11.71□□□□□ -0.53
HDAC1-209ENST00000484305 SMU1Q2TAY7 513 aa11.71□□□□□ -0.53
HDAC1-209ENST00000484305 GRAMD1BQ3KR37 738 aa11.71□□□□□ -0.53
HDAC1-209ENST00000484305 VPS26BQ4G0F5 336 aa11.71□□□□□ -0.53
HDAC1-209ENST00000484305 EXOSC6Q5RKV6 272 aaKnown RBP11.71□□□□□ -0.53
HDAC1-209ENST00000484305 RIPPLY2Q5TAB7 128 aa11.71□□□□□ -0.53
HDAC1-209ENST00000484305 APOOLQ6UXV4 268 aa11.71□□□□□ -0.53
HDAC1-209ENST00000484305 MEX3BQ6ZN04 569 aaKnown RBP11.71□□□□□ -0.53
HDAC1-209ENST00000484305 FADS6Q8N9I5 356 aa11.71□□□□□ -0.53
HDAC1-209ENST00000484305 NAXEQ8NCW5 288 aa11.71□□□□□ -0.53
HDAC1-209ENST00000484305 OR2M3Q8NG83 312 aa11.71□□□□□ -0.53
HDAC1-209ENST00000484305 MGARPQ8TDB4 240 aa11.71□□□□□ -0.53
HDAC1-209ENST00000484305 DUSP19Q8WTR2 217 aa11.71□□□□□ -0.53
HDAC1-209ENST00000484305 TRIB1Q96RU8 372 aa11.71□□□□□ -0.53
HDAC1-209ENST00000484305 TREX2Q9BQ50 279 aaPredicted RBP11.71□□□□□ -0.53
HDAC1-209ENST00000484305 DUSP26Q9BV47 211 aa11.71□□□□□ -0.53
HDAC1-209ENST00000484305 NUF2Q9BZD4 464 aa11.71□□□□□ -0.53
HDAC1-209ENST00000484305 CXorf36Q9H7Y0 433 aa11.71□□□□□ -0.53
HDAC1-209ENST00000484305 TMBIM4Q9HC24 238 aa11.71□□□□□ -0.53
HDAC1-209ENST00000484305 ZCCHC3Q9NUD5 404 aaKnown RBP11.71□□□□□ -0.53
HDAC1-209ENST00000484305 ATAD3AQ9NVI7 634 aa11.71□□□□□ -0.53
HDAC1-209ENST00000484305 FBXO34Q9NWN3 711 aa11.71□□□□□ -0.53
HDAC1-209ENST00000484305 MED11Q9P086 117 aa11.71□□□□□ -0.53
HDAC1-209ENST00000484305 DKKL1Q9UK85 242 aa11.71□□□□□ -0.53
HDAC1-209ENST00000484305 ABCG2Q9UNQ0 655 aa11.71□□□□□ -0.53
HDAC1-209ENST00000484305 RPH3AQ9Y2J0 694 aaPredicted RBP11.71□□□□□ -0.53
HDAC1-209ENST00000484305 MRPS18CQ9Y3D5 142 aaKnown RBP11.71□□□□□ -0.53
HDAC1-209ENST00000484305 SNX8Q9Y5X2 465 aa11.71□□□□□ -0.53
HDAC1-209ENST00000484305 FBN2P35556 2912 aa11.71□□□□□ -0.54
HDAC1-209ENST00000484305 DCHS2Q6V1P9 2916 aa11.71□□□□□ -0.54
HDAC1-209ENST00000484305 LRBAP50851 2863 aa11.7□□□□□ -0.54
HDAC1-209ENST00000484305 KCNK2O95069 426 aa11.7□□□□□ -0.54
HDAC1-209ENST00000484305 HMGN2P05204 90 aaKnown RBP11.7□□□□□ -0.54
HDAC1-209ENST00000484305 ALOX5P09917 674 aa11.7□□□□□ -0.54
HDAC1-209ENST00000484305 CPN1P15169 458 aa11.7□□□□□ -0.54
HDAC1-209ENST00000484305 IGFBP2P18065 325 aa11.7□□□□□ -0.54
HDAC1-209ENST00000484305 CEACAM8P31997 349 aaPredicted RBP11.7□□□□□ -0.54
HDAC1-209ENST00000484305 GCKP35557 465 aa11.7□□□□□ -0.54
HDAC1-209ENST00000484305 TIMP3P35625 211 aa11.7□□□□□ -0.54
HDAC1-209ENST00000484305 CCT3P49368 545 aaKnown RBP11.7□□□□□ -0.54
HDAC1-209ENST00000484305 CLK3P49761 638 aaKnown RBP11.7□□□□□ -0.54
HDAC1-209ENST00000484305 CLDN8P56748 225 aa11.7□□□□□ -0.54
HDAC1-209ENST00000484305 B3GALT5-AS1P59052 145 aa11.7□□□□□ -0.54
HDAC1-209ENST00000484305 MAGOHP61326 146 aaKnown RBP11.7□□□□□ -0.54
HDAC1-209ENST00000484305 SRYQ05066 204 aa11.7□□□□□ -0.54
HDAC1-209ENST00000484305 PGS1Q32NB8 556 aa11.7□□□□□ -0.54
HDAC1-209ENST00000484305 NSUN5P2Q63ZY6 315 aa11.7□□□□□ -0.54
HDAC1-209ENST00000484305 FIGNL1Q6PIW4 674 aa11.7□□□□□ -0.54
HDAC1-209ENST00000484305 ZAR1Q86SH2 424 aa11.7□□□□□ -0.54
HDAC1-209ENST00000484305 MED12LQ86YW9 2145 aa11.7□□□□□ -0.54
HDAC1-209ENST00000484305 LACC1Q8IV20 430 aa11.7□□□□□ -0.54
HDAC1-209ENST00000484305 OR4K17Q8NGC6 315 aa11.7□□□□□ -0.54
HDAC1-209ENST00000484305 OR4C3Q8NH37 302 aa11.7□□□□□ -0.54
HDAC1-209ENST00000484305 PSMA8Q8TAA3 256 aa11.7□□□□□ -0.54
HDAC1-209ENST00000484305 FAM110BQ8TC76 370 aa11.7□□□□□ -0.54
HDAC1-209ENST00000484305 OR5P2Q8WZ92 322 aa11.7□□□□□ -0.54
HDAC1-209ENST00000484305 JADE3Q92613 823 aa11.7□□□□□ -0.54
HDAC1-209ENST00000484305 TLCD1Q96CP7 247 aa11.7□□□□□ -0.54
HDAC1-209ENST00000484305 PRPF18Q99633 342 aaKnown RBP11.7□□□□□ -0.54
HDAC1-209ENST00000484305 BHLHE41Q9C0J9 482 aaPredicted RBP11.7□□□□□ -0.54
HDAC1-209ENST00000484305 SDHAF3Q9NRP4 125 aa11.7□□□□□ -0.54
HDAC1-209ENST00000484305 CD8B2A6NJW9 211 aa11.69□□□□□ -0.54
HDAC1-209ENST00000484305 HSPB2A8KAH6 182 aa11.69□□□□□ -0.54
HDAC1-209ENST00000484305 FAM47E-STBD1D6RA91 191 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms