RNA–Protein interactions for RNA: ENST00000556413.1

SCFD1-219, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-219ENST00000556413 TFDP1Q14186 410 aa2.42□□□□□ -2.02
SCFD1-219ENST00000556413 POM121L1PQ3SYA9 428 aa2.42□□□□□ -2.02
SCFD1-219ENST00000556413 SLC22A6Q4U2R8 563 aa2.42□□□□□ -2.02
SCFD1-219ENST00000556413 TCP11X2Q5H9J9 407 aa2.42□□□□□ -2.02
SCFD1-219ENST00000556413 ATF7IP2Q5U623 682 aa2.42□□□□□ -2.02
SCFD1-219ENST00000556413 WSCD1Q658N2 575 aa2.42□□□□□ -2.02
SCFD1-219ENST00000556413 DHRS11Q6UWP2 260 aa2.42□□□□□ -2.02
SCFD1-219ENST00000556413 RUFY3Q7L099 469 aa2.42□□□□□ -2.02
SCFD1-219ENST00000556413 ABI3BPQ7Z7G0 1075 aa2.42□□□□□ -2.02
SCFD1-219ENST00000556413 AMIGO1Q86WK6 493 aa2.42□□□□□ -2.02
SCFD1-219ENST00000556413 CCDC83Q8IWF9 413 aa2.42□□□□□ -2.02
SCFD1-219ENST00000556413 ZBTB8OSQ8IWT0 167 aa2.42□□□□□ -2.02
SCFD1-219ENST00000556413 C4orf19Q8IY42 314 aa2.42□□□□□ -2.02
SCFD1-219ENST00000556413 DAW1Q8N136 415 aa2.42□□□□□ -2.02
SCFD1-219ENST00000556413 CCAR2Q8N163 923 aaKnown RBP2.42□□□□□ -2.02
SCFD1-219ENST00000556413 TCP11Q8WWU5 503 aa2.42□□□□□ -2.02
SCFD1-219ENST00000556413 RSPH1Q8WYR4 309 aa2.42□□□□□ -2.02
SCFD1-219ENST00000556413 SMARCD2Q92925 531 aa2.42□□□□□ -2.02
SCFD1-219ENST00000556413 CLDN23Q96B33 292 aa2.42□□□□□ -2.02
SCFD1-219ENST00000556413 RMDN2Q96LZ7 410 aa2.42□□□□□ -2.02
SCFD1-219ENST00000556413 WDR41Q9HAD4 459 aa2.42□□□□□ -2.02
SCFD1-219ENST00000556413 ZFP14Q9HCL3 533 aa2.42□□□□□ -2.02
SCFD1-219ENST00000556413 HPS4Q9NQG7 708 aa2.42□□□□□ -2.02
SCFD1-219ENST00000556413 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.42□□□□□ -2.02
SCFD1-219ENST00000556413 DDX19AQ9NUU7 478 aaKnown RBP2.42□□□□□ -2.02
SCFD1-219ENST00000556413 KLK4Q9Y5K2 254 aa2.42□□□□□ -2.02
SCFD1-219ENST00000556413 CACNA1BQ00975 2339 aa2.42□□□□□ -2.02
SCFD1-219ENST00000556413 OTOGLQ3ZCN5 2332 aa2.42□□□□□ -2.02
SCFD1-219ENST00000556413 DOCK6Q96HP0 2047 aa2.42□□□□□ -2.02
SCFD1-219ENST00000556413 LAMA5O15230 3695 aa2.41□□□□□ -2.02
SCFD1-219ENST00000556413 CEP250Q9BV73 2442 aa2.41□□□□□ -2.02
SCFD1-219ENST00000556413 PATJQ8NI35 1801 aa2.41□□□□□ -2.02
SCFD1-219ENST00000556413 A0A1B0GUA9 196 aa2.41□□□□□ -2.02
SCFD1-219ENST00000556413 FAM149AA5PLN7 773 aa2.41□□□□□ -2.02
SCFD1-219ENST00000556413 GOLGA8IPA6NC78 632 aa2.41□□□□□ -2.02
SCFD1-219ENST00000556413 GOLGA8JA6NMD2 632 aa2.41□□□□□ -2.02
SCFD1-219ENST00000556413 KIF5CO60282 957 aa2.41□□□□□ -2.02
SCFD1-219ENST00000556413 SRPX2O60687 465 aaPredicted RBP2.41□□□□□ -2.02
SCFD1-219ENST00000556413 OR6B1O95007 311 aa2.41□□□□□ -2.02
SCFD1-219ENST00000556413 IGHG1P01857 330 aa2.41□□□□□ -2.02
SCFD1-219ENST00000556413 IGKV3-11P04433 115 aa2.41□□□□□ -2.02
SCFD1-219ENST00000556413 HCKP08631 526 aa2.41□□□□□ -2.02
SCFD1-219ENST00000556413 PSMC3P17980 439 aa2.41□□□□□ -2.02
SCFD1-219ENST00000556413 EPORP19235 508 aa2.41□□□□□ -2.02
SCFD1-219ENST00000556413 ELK1P19419 428 aa2.41□□□□□ -2.02
SCFD1-219ENST00000556413 CRYBA2P53672 197 aa2.41□□□□□ -2.02
SCFD1-219ENST00000556413 CLDN17P56750 224 aa2.41□□□□□ -2.02
SCFD1-219ENST00000556413 NAAAQ02083 359 aa2.41□□□□□ -2.02
SCFD1-219ENST00000556413 SULT2A1Q06520 285 aa2.41□□□□□ -2.02
SCFD1-219ENST00000556413 TNK1Q13470 666 aa2.41□□□□□ -2.02
SCFD1-219ENST00000556413 IL17AQ16552 155 aa2.41□□□□□ -2.02
SCFD1-219ENST00000556413 MAPK6Q16659 721 aa2.41□□□□□ -2.02
SCFD1-219ENST00000556413 ZNF528Q3MIS6 628 aa2.41□□□□□ -2.02
SCFD1-219ENST00000556413 DCAF4L1Q3SXM0 396 aa2.41□□□□□ -2.02
SCFD1-219ENST00000556413 FAM174BQ3ZCQ3 159 aa2.41□□□□□ -2.02
SCFD1-219ENST00000556413 SLC39A12Q504Y0 691 aa2.41□□□□□ -2.02
SCFD1-219ENST00000556413 C6orf136Q5SQH8 315 aa2.41□□□□□ -2.02
SCFD1-219ENST00000556413 OTUD6AQ7L8S5 288 aa2.41□□□□□ -2.02
SCFD1-219ENST00000556413 PRUNE1Q86TP1 453 aa2.41□□□□□ -2.02
SCFD1-219ENST00000556413 DND1Q8IYX4 353 aaKnown RBP2.41□□□□□ -2.02
SCFD1-219ENST00000556413 OR8H2Q8N162 312 aa2.41□□□□□ -2.02
SCFD1-219ENST00000556413 ELMOD1Q8N336 334 aa2.41□□□□□ -2.02
SCFD1-219ENST00000556413 CHCHD4Q8N4Q1 142 aa2.41□□□□□ -2.02
SCFD1-219ENST00000556413 RAD54LQ92698 747 aa2.41□□□□□ -2.02
SCFD1-219ENST00000556413 DNASE1L2Q92874 299 aa2.41□□□□□ -2.02
SCFD1-219ENST00000556413 ELSPBP1Q96BH3 223 aa2.41□□□□□ -2.02
SCFD1-219ENST00000556413 CCDC51Q96ER9 411 aa2.41□□□□□ -2.02
SCFD1-219ENST00000556413 LURAP1Q96LR2 239 aa2.41□□□□□ -2.02
SCFD1-219ENST00000556413 CYP2S1Q96SQ9 504 aa2.41□□□□□ -2.02
SCFD1-219ENST00000556413 HSD17B14Q9BPX1 270 aa2.41□□□□□ -2.02
SCFD1-219ENST00000556413 JPH2Q9BR39 696 aaPredicted RBP2.41□□□□□ -2.02
SCFD1-219ENST00000556413 ADPGKQ9BRR6 497 aa2.41□□□□□ -2.02
SCFD1-219ENST00000556413 ALKBH7Q9BT30 221 aaPredicted RBP2.41□□□□□ -2.02
SCFD1-219ENST00000556413 TCHPQ9BT92 498 aa2.41□□□□□ -2.02
SCFD1-219ENST00000556413 GLT8D2Q9H1C3 349 aa2.41□□□□□ -2.02
SCFD1-219ENST00000556413 OR10A4Q9H209 315 aa2.41□□□□□ -2.02
SCFD1-219ENST00000556413 RABEP2Q9H5N1 569 aa2.41□□□□□ -2.02
SCFD1-219ENST00000556413 IARS2Q9NSE4 1012 aaKnown RBP2.41□□□□□ -2.02
SCFD1-219ENST00000556413 DEPPQ9NTK1 212 aa2.41□□□□□ -2.02
SCFD1-219ENST00000556413 SLCO1B1Q9Y6L6 691 aa2.41□□□□□ -2.02
SCFD1-219ENST00000556413 COLEC10Q9Y6Z7 277 aa2.41□□□□□ -2.02
SCFD1-219ENST00000556413 COL4A2P08572 1712 aa2.41□□□□□ -2.02
SCFD1-219ENST00000556413 LAMA1P25391 3075 aa2.41□□□□□ -2.02
SCFD1-219ENST00000556413 DOCK8Q8NF50 2099 aa2.41□□□□□ -2.02
SCFD1-219ENST00000556413 EPG5Q9HCE0 2579 aa2.41□□□□□ -2.02
SCFD1-219ENST00000556413 MAP1BP46821 2468 aaKnown RBP2.41□□□□□ -2.02
SCFD1-219ENST00000556413 VWA8A3KMH1 1905 aa2.4□□□□□ -2.02
SCFD1-219ENST00000556413 ZZEF1O43149 2961 aa2.4□□□□□ -2.02
SCFD1-219ENST00000556413 TICRRQ7Z2Z1 1910 aa2.4□□□□□ -2.02
SCFD1-219ENST00000556413 CELSR3Q9NYQ7 3312 aa2.4□□□□□ -2.02
SCFD1-219ENST00000556413 FREM2Q5SZK8 3169 aa2.4□□□□□ -2.03
SCFD1-219ENST00000556413 KMT2BQ9UMN6 2715 aaPredicted RBP2.4□□□□□ -2.03
SCFD1-219ENST00000556413 ARHGEF37A1IGU5 675 aa2.4□□□□□ -2.03
SCFD1-219ENST00000556413 MYBPHLA2RUH7 354 aa2.4□□□□□ -2.03
SCFD1-219ENST00000556413 ANKRD63C9JTQ0 380 aa2.4□□□□□ -2.03
SCFD1-219ENST00000556413 E5RGE8 158 aa2.4□□□□□ -2.03
SCFD1-219ENST00000556413 CCDC188H7C350 402 aa2.4□□□□□ -2.03
SCFD1-219ENST00000556413 SIGLEC5O15389 551 aa2.4□□□□□ -2.03
SCFD1-219ENST00000556413 PLOD3O60568 738 aa2.4□□□□□ -2.03
SCFD1-219ENST00000556413 PFKFB2O60825 505 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms