RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, human

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-222	ENST00000524006	RBCK1	Q9BYM8	510 aa		10.06	□□□□□ -0.8
SPIDR-222	ENST00000524006	POLR2J2	Q9GZM3	115 aa	Known RBP	10.06	□□□□□ -0.8
SPIDR-222	ENST00000524006	NAA50	Q9GZZ1	169 aa	Known RBP	10.06	□□□□□ -0.8
SPIDR-222	ENST00000524006	QRSL1	Q9H0R6	528 aa	Known RBP	10.06	□□□□□ -0.8
SPIDR-222	ENST00000524006	SLC38A1	Q9H2H9	487 aa		10.06	□□□□□ -0.8
SPIDR-222	ENST00000524006	PIGU	Q9H490	435 aa		10.06	□□□□□ -0.8
SPIDR-222	ENST00000524006	PLGRKT	Q9HBL7	147 aa		10.06	□□□□□ -0.8
SPIDR-222	ENST00000524006	PDE7B	Q9NP56	450 aa		10.06	□□□□□ -0.8
SPIDR-222	ENST00000524006	POLE3	Q9NRF9	147 aa		10.06	□□□□□ -0.8
SPIDR-222	ENST00000524006	PRTFDC1	Q9NRG1	225 aa		10.06	□□□□□ -0.8
SPIDR-222	ENST00000524006	DUSP22	Q9NRW4	184 aa		10.06	□□□□□ -0.8
SPIDR-222	ENST00000524006	CNOT2	Q9NZN8	540 aa	Known RBP	10.06	□□□□□ -0.8
SPIDR-222	ENST00000524006	SELENON	Q9NZV5	590 aa		10.06	□□□□□ -0.8
SPIDR-222	ENST00000524006	NTM	Q9P121	344 aa		10.06	□□□□□ -0.8
SPIDR-222	ENST00000524006	HCN3	Q9P1Z3	774 aa		10.06	□□□□□ -0.8
SPIDR-222	ENST00000524006	A4GNT	Q9UNA3	340 aa		10.06	□□□□□ -0.8
SPIDR-222	ENST00000524006	MRPS2	Q9Y399	296 aa	Known RBP	10.06	□□□□□ -0.8
SPIDR-222	ENST00000524006	RPL36	Q9Y3U8	105 aa	Known RBP	10.06	□□□□□ -0.8
SPIDR-222	ENST00000524006	DSPP	Q9NZW4	1301 aa		10.06	□□□□□ -0.8
SPIDR-222	ENST00000524006	ADAMTS20	P59510	1910 aa		10.05	□□□□□ -0.8
SPIDR-222	ENST00000524006	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		10.05	□□□□□ -0.8
SPIDR-222	ENST00000524006		A0A0A6YYC8	382 aa	Predicted RBP	10.05	□□□□□ -0.8
SPIDR-222	ENST00000524006	SHISA7	A6NL88	538 aa		10.05	□□□□□ -0.8
SPIDR-222	ENST00000524006		I3L1I5	382 aa	Predicted RBP	10.05	□□□□□ -0.8
SPIDR-222	ENST00000524006	MYL12B	O14950	172 aa		10.05	□□□□□ -0.8
SPIDR-222	ENST00000524006	CHST10	O43529	356 aa		10.05	□□□□□ -0.8
SPIDR-222	ENST00000524006	DUX1	O43812	170 aa		10.05	□□□□□ -0.8
SPIDR-222	ENST00000524006	CYP7B1	O75881	506 aa		10.05	□□□□□ -0.8
SPIDR-222	ENST00000524006	OR5F1	O95221	314 aa		10.05	□□□□□ -0.8
SPIDR-222	ENST00000524006	RECK	O95980	971 aa		10.05	□□□□□ -0.8
SPIDR-222	ENST00000524006	SLC35E2	P0CK97	266 aa		10.05	□□□□□ -0.8
SPIDR-222	ENST00000524006	TNNI3	P19429	210 aa		10.05	□□□□□ -0.8
SPIDR-222	ENST00000524006	PCMT1	P22061	227 aa		10.05	□□□□□ -0.8
SPIDR-222	ENST00000524006	RFX3	P48380	749 aa		10.05	□□□□□ -0.8
SPIDR-222	ENST00000524006	MAN2A2	P49641	1150 aa		10.05	□□□□□ -0.8
SPIDR-222	ENST00000524006	EPHA4	P54764	986 aa		10.05	□□□□□ -0.8
SPIDR-222	ENST00000524006	GP2	P55259	537 aa	Known RBP	10.05	□□□□□ -0.8
SPIDR-222	ENST00000524006	STARD6	P59095	220 aa		10.05	□□□□□ -0.8
SPIDR-222	ENST00000524006	ILK	Q13418	452 aa		10.05	□□□□□ -0.8
SPIDR-222	ENST00000524006	SEC23B	Q15437	767 aa		10.05	□□□□□ -0.8
SPIDR-222	ENST00000524006	DUSP5	Q16690	384 aa		10.05	□□□□□ -0.8
SPIDR-222	ENST00000524006	DGUOK	Q16854	277 aa		10.05	□□□□□ -0.8
SPIDR-222	ENST00000524006	TIGD6	Q17RP2	521 aa		10.05	□□□□□ -0.8
SPIDR-222	ENST00000524006	TMEM44	Q2T9K0	475 aa		10.05	□□□□□ -0.8
SPIDR-222	ENST00000524006	DEFB133	Q30KQ1	61 aa		10.05	□□□□□ -0.8
SPIDR-222	ENST00000524006	INAVA	Q3KP66	663 aa		10.05	□□□□□ -0.8
SPIDR-222	ENST00000524006	TIMM50	Q3ZCQ8	353 aa		10.05	□□□□□ -0.8
SPIDR-222	ENST00000524006	C14orf28	Q4W4Y0	310 aa		10.05	□□□□□ -0.8
SPIDR-222	ENST00000524006	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	10.05	□□□□□ -0.8
SPIDR-222	ENST00000524006	GARNL3	Q5VVW2	1013 aa		10.05	□□□□□ -0.8
SPIDR-222	ENST00000524006	MEDAG	Q5VYS4	303 aa		10.05	□□□□□ -0.8
SPIDR-222	ENST00000524006	HEPHL1	Q6MZM0	1159 aa		10.05	□□□□□ -0.8
SPIDR-222	ENST00000524006	ZNF836	Q6ZNA1	936 aa		10.05	□□□□□ -0.8
SPIDR-222	ENST00000524006	FRRS1	Q6ZNA5	592 aa		10.05	□□□□□ -0.8
SPIDR-222	ENST00000524006	PRSS41	Q7RTY9	318 aa		10.05	□□□□□ -0.8
SPIDR-222	ENST00000524006	ZNF595	Q8IYB9	648 aa		10.05	□□□□□ -0.8
SPIDR-222	ENST00000524006	TMEFF1	Q8IYR6	380 aa		10.05	□□□□□ -0.8
SPIDR-222	ENST00000524006	ZNF614	Q8N883	585 aa		10.05	□□□□□ -0.8
SPIDR-222	ENST00000524006	SLC16A11	Q8NCK7	471 aa		10.05	□□□□□ -0.8
SPIDR-222	ENST00000524006	KBTBD8	Q8NFY9	601 aa		10.05	□□□□□ -0.8
SPIDR-222	ENST00000524006	OR5T3	Q8NGG3	340 aa		10.05	□□□□□ -0.8
SPIDR-222	ENST00000524006	OR52L1	Q8NGH7	329 aa		10.05	□□□□□ -0.8
SPIDR-222	ENST00000524006	OR8J1	Q8NGP2	316 aa		10.05	□□□□□ -0.8
SPIDR-222	ENST00000524006	WDR36	Q8NI36	951 aa	Known RBP	10.05	□□□□□ -0.8
SPIDR-222	ENST00000524006	TRUB1	Q8WWH5	349 aa	Known RBP	10.05	□□□□□ -0.8
SPIDR-222	ENST00000524006	PMM1	Q92871	262 aa		10.05	□□□□□ -0.8
SPIDR-222	ENST00000524006	BORCS5	Q969J3	196 aa		10.05	□□□□□ -0.8
SPIDR-222	ENST00000524006	GIMAP5	Q96F15	307 aa		10.05	□□□□□ -0.8
SPIDR-222	ENST00000524006	YIPF2	Q9BWQ6	316 aa		10.05	□□□□□ -0.8
SPIDR-222	ENST00000524006	TWSG1	Q9GZX9	223 aa		10.05	□□□□□ -0.8
SPIDR-222	ENST00000524006	RACGAP1	Q9H0H5	632 aa		10.05	□□□□□ -0.8
SPIDR-222	ENST00000524006	ANKRA2	Q9H9E1	313 aa		10.05	□□□□□ -0.8
SPIDR-222	ENST00000524006	NECTIN3	Q9NQS3	549 aa		10.05	□□□□□ -0.8
SPIDR-222	ENST00000524006	CHCHD3	Q9NX63	227 aa	Known RBP	10.05	□□□□□ -0.8
SPIDR-222	ENST00000524006	GPR83	Q9NYM4	423 aa		10.05	□□□□□ -0.8
SPIDR-222	ENST00000524006	ZNF226	Q9NYT6	803 aa		10.05	□□□□□ -0.8
SPIDR-222	ENST00000524006	MKLN1	Q9UL63	735 aa		10.05	□□□□□ -0.8
SPIDR-222	ENST00000524006	KCNE3	Q9Y6H6	103 aa		10.05	□□□□□ -0.8
SPIDR-222	ENST00000524006	TNRC6B	Q9UPQ9	1833 aa	Known RBP	10.05	□□□□□ -0.8
SPIDR-222	ENST00000524006	CACNA1B	Q00975	2339 aa		10.04	□□□□□ -0.8
SPIDR-222	ENST00000524006	MED19	A0JLT2	244 aa	Predicted RBP	10.04	□□□□□ -0.8
SPIDR-222	ENST00000524006	PRAMEF27	A3QJZ7	478 aa		10.04	□□□□□ -0.8
SPIDR-222	ENST00000524006	C10orf142	B7Z368	130 aa		10.04	□□□□□ -0.8
SPIDR-222	ENST00000524006	TMEM150C	B9EJG8	249 aa		10.04	□□□□□ -0.8
SPIDR-222	ENST00000524006	LMO7DN	F2Z398	122 aa		10.04	□□□□□ -0.8
SPIDR-222	ENST00000524006		M0R129	80 aa		10.04	□□□□□ -0.8
SPIDR-222	ENST00000524006	PLOD3	O60568	738 aa		10.04	□□□□□ -0.8
SPIDR-222	ENST00000524006	PRAMEF2	O60811	474 aa		10.04	□□□□□ -0.8
SPIDR-222	ENST00000524006	CLPX	O76031	633 aa		10.04	□□□□□ -0.8
SPIDR-222	ENST00000524006	GABARAP	O95166	117 aa		10.04	□□□□□ -0.8
SPIDR-222	ENST00000524006	IFNA16	P05015	189 aa		10.04	□□□□□ -0.8
SPIDR-222	ENST00000524006	CD36	P16671	472 aa		10.04	□□□□□ -0.8
SPIDR-222	ENST00000524006	MYL12A	P19105	171 aa		10.04	□□□□□ -0.8
SPIDR-222	ENST00000524006	MAOB	P27338	520 aa		10.04	□□□□□ -0.8
SPIDR-222	ENST00000524006	GABRA3	P34903	492 aa		10.04	□□□□□ -0.8
SPIDR-222	ENST00000524006	MASP1	P48740	699 aa		10.04	□□□□□ -0.8
SPIDR-222	ENST00000524006	PSMD4	P55036	377 aa	Known RBP	10.04	□□□□□ -0.8
SPIDR-222	ENST00000524006	NXPH1	P58417	271 aa		10.04	□□□□□ -0.8
SPIDR-222	ENST00000524006	SNRPG	P62308	76 aa	Known RBP	10.04	□□□□□ -0.8
SPIDR-222	ENST00000524006	ST3GAL4	Q11206	333 aa		10.04	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms