RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 IQCCQ4KMZ1 466 aa5.49□□□□□ -1.53
USP39-213ENST00000467885 KLHL26Q53HC5 615 aa5.49□□□□□ -1.53
USP39-213ENST00000467885 GCNT6Q5T4J0 391 aa5.49□□□□□ -1.53
USP39-213ENST00000467885 CCNJQ5T5M9 372 aa5.49□□□□□ -1.53
USP39-213ENST00000467885 ATP1A1-AS1Q5TC04 95 aa5.49□□□□□ -1.53
USP39-213ENST00000467885 PRAMEF8Q5VWM4 474 aa5.49□□□□□ -1.53
USP39-213ENST00000467885 PRAMEF7Q5VXH5 474 aa5.49□□□□□ -1.53
USP39-213ENST00000467885 TYW3Q6IPR3 259 aaKnown RBP5.49□□□□□ -1.53
USP39-213ENST00000467885 REEP3Q6NUK4 255 aa5.49□□□□□ -1.53
USP39-213ENST00000467885 TCTN3Q6NUS6 607 aa5.49□□□□□ -1.53
USP39-213ENST00000467885 ERICH5Q6P6B1 374 aa5.49□□□□□ -1.53
USP39-213ENST00000467885 LRRC74BQ6ZQY2 392 aa5.49□□□□□ -1.53
USP39-213ENST00000467885 TSEN54Q7Z6J9 526 aaKnown RBP5.49□□□□□ -1.53
USP39-213ENST00000467885 MRGPREQ86SM8 312 aa5.49□□□□□ -1.53
USP39-213ENST00000467885 RPS19BP1Q86WX3 136 aaKnown RBP5.49□□□□□ -1.53
USP39-213ENST00000467885 PROSER1Q86XN7 944 aa5.49□□□□□ -1.53
USP39-213ENST00000467885 SPPL2CQ8IUH8 684 aa5.49□□□□□ -1.53
USP39-213ENST00000467885 BCORP1Q8N888 145 aa5.49□□□□□ -1.53
USP39-213ENST00000467885 C11orf65Q8NCR3 313 aa5.49□□□□□ -1.53
USP39-213ENST00000467885 ZNF248Q8NDW4 579 aa5.49□□□□□ -1.53
USP39-213ENST00000467885 OR5L2Q8NGL0 311 aa5.49□□□□□ -1.53
USP39-213ENST00000467885 NFKBIDQ8NI38 313 aa5.49□□□□□ -1.53
USP39-213ENST00000467885 NUBPLQ8TB37 319 aa5.49□□□□□ -1.53
USP39-213ENST00000467885 THAP3Q8WTV1 239 aaPredicted RBP5.49□□□□□ -1.53
USP39-213ENST00000467885 THAP4Q8WY91 577 aa5.49□□□□□ -1.53
USP39-213ENST00000467885 PMM1Q92871 262 aa5.49□□□□□ -1.53
USP39-213ENST00000467885 MCUR1Q96AQ8 359 aa5.49□□□□□ -1.53
USP39-213ENST00000467885 KIAA1143Q96AT1 154 aaPredicted RBP5.49□□□□□ -1.53
USP39-213ENST00000467885 ASB9Q96DX5 294 aa5.49□□□□□ -1.53
USP39-213ENST00000467885 HSPBAP1Q96EW2 488 aa5.49□□□□□ -1.53
USP39-213ENST00000467885 DUS3LQ96G46 650 aaKnown RBP5.49□□□□□ -1.53
USP39-213ENST00000467885 NAF1Q96HR8 494 aaKnown RBP5.49□□□□□ -1.53
USP39-213ENST00000467885 SLC35G5Q96KT7 338 aa5.49□□□□□ -1.53
USP39-213ENST00000467885 IP6K3Q96PC2 410 aa5.49□□□□□ -1.53
USP39-213ENST00000467885 MS4A4EQ96PG1 132 aa5.49□□□□□ -1.53
USP39-213ENST00000467885 LMF1Q96S06 567 aa5.49□□□□□ -1.53
USP39-213ENST00000467885 CCNL2Q96S94 520 aaPredicted RBP5.49□□□□□ -1.53
USP39-213ENST00000467885 KCTD14Q9BQ13 255 aaPredicted RBP5.49□□□□□ -1.53
USP39-213ENST00000467885 TREX2Q9BQ50 279 aaPredicted RBP5.49□□□□□ -1.53
USP39-213ENST00000467885 WFDC6Q9BQY6 131 aa5.49□□□□□ -1.53
USP39-213ENST00000467885 ITPAQ9BY32 194 aa5.49□□□□□ -1.53
USP39-213ENST00000467885 DEFB126Q9BYW3 111 aa5.49□□□□□ -1.53
USP39-213ENST00000467885 WWTR1Q9GZV5 400 aa5.49□□□□□ -1.53
USP39-213ENST00000467885 CDCP1Q9H5V8 836 aa5.49□□□□□ -1.53
USP39-213ENST00000467885 DCAF13Q9NV06 445 aaKnown RBP5.49□□□□□ -1.53
USP39-213ENST00000467885 STMN3Q9NZ72 180 aa5.49□□□□□ -1.53
USP39-213ENST00000467885 FBXL4Q9UKA2 621 aa5.49□□□□□ -1.53
USP39-213ENST00000467885 MKLN1Q9UL63 735 aa5.49□□□□□ -1.53
USP39-213ENST00000467885 CBLCQ9ULV8 474 aa5.49□□□□□ -1.53
USP39-213ENST00000467885 ZNF451Q9Y4E5 1061 aa5.49□□□□□ -1.53
USP39-213ENST00000467885 PCDHGB3Q9Y5G1 929 aa5.49□□□□□ -1.53
USP39-213ENST00000467885 NPFFR2Q9Y5X5 522 aa5.49□□□□□ -1.53
USP39-213ENST00000467885 PIEZO1Q92508 2521 aa5.49□□□□□ -1.53
USP39-213ENST00000467885 PCSK5Q92824 1860 aa5.48□□□□□ -1.53
USP39-213ENST00000467885 TCRBV3S1A0A5B6 114 aa5.48□□□□□ -1.53
USP39-213ENST00000467885 MED19A0JLT2 244 aaPredicted RBP5.48□□□□□ -1.53
USP39-213ENST00000467885 FRG2CA6NGY1 282 aa5.48□□□□□ -1.53
USP39-213ENST00000467885 AGAP5A6NIR3 686 aa5.48□□□□□ -1.53
USP39-213ENST00000467885 AQP12BA6NM10 295 aa5.48□□□□□ -1.53
USP39-213ENST00000467885 WWP2O00308 870 aa5.48□□□□□ -1.53
USP39-213ENST00000467885 PEX12O00623 359 aa5.48□□□□□ -1.53
USP39-213ENST00000467885 FADS1O60427 444 aa5.48□□□□□ -1.53
USP39-213ENST00000467885 STX11O75558 287 aa5.48□□□□□ -1.53
USP39-213ENST00000467885 REM1O75628 298 aa5.48□□□□□ -1.53
USP39-213ENST00000467885 UGT2B17O75795 530 aa5.48□□□□□ -1.53
USP39-213ENST00000467885 OR2J2O76002 312 aa5.48□□□□□ -1.53
USP39-213ENST00000467885 H6PDO95479 791 aa5.48□□□□□ -1.53
USP39-213ENST00000467885 EPPINO95925 133 aa5.48□□□□□ -1.53
USP39-213ENST00000467885 ETS2P15036 469 aa5.48□□□□□ -1.53
USP39-213ENST00000467885 TBXA2RP21731 343 aa5.48□□□□□ -1.53
USP39-213ENST00000467885 ABCD3P28288 659 aa5.48□□□□□ -1.53
USP39-213ENST00000467885 PCGF2P35227 344 aa5.48□□□□□ -1.53
USP39-213ENST00000467885 KCNJ5P48544 419 aa5.48□□□□□ -1.53
USP39-213ENST00000467885 KHKP50053 298 aa5.48□□□□□ -1.53
USP39-213ENST00000467885 ANXA11P50995 505 aaKnown RBP5.48□□□□□ -1.53
USP39-213ENST00000467885 PNLIPRP2P54317 469 aa5.48□□□□□ -1.53
USP39-213ENST00000467885 ACTR3P61158 418 aa5.48□□□□□ -1.53
USP39-213ENST00000467885 SELENOWP63302 87 aa5.48□□□□□ -1.53
USP39-213ENST00000467885 POU6F2P78424 691 aaPredicted RBP5.48□□□□□ -1.53
USP39-213ENST00000467885 ELF3P78545 371 aaPredicted RBP5.48□□□□□ -1.53
USP39-213ENST00000467885 RHDQ02161 417 aa5.48□□□□□ -1.53
USP39-213ENST00000467885 DMTNQ08495 405 aa5.48□□□□□ -1.53
USP39-213ENST00000467885 BNIP2Q12982 314 aa5.48□□□□□ -1.53
USP39-213ENST00000467885 ZNF141Q15928 474 aa5.48□□□□□ -1.53
USP39-213ENST00000467885 CYP51A1Q16850 503 aa5.48□□□□□ -1.53
USP39-213ENST00000467885 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.48□□□□□ -1.53
USP39-213ENST00000467885 DCST2Q5T1A1 773 aa5.48□□□□□ -1.53
USP39-213ENST00000467885 ZNF468Q5VIY5 522 aaPredicted RBP5.48□□□□□ -1.53
USP39-213ENST00000467885 B3GNTL1Q67FW5 361 aaPredicted RBP5.48□□□□□ -1.53
USP39-213ENST00000467885 FCRLBQ6BAA4 426 aa5.48□□□□□ -1.53
USP39-213ENST00000467885 LCN8Q6JVE9 175 aa5.48□□□□□ -1.53
USP39-213ENST00000467885 JMJD6Q6NYC1 403 aaPredicted RBP5.48□□□□□ -1.53
USP39-213ENST00000467885 FIGNL1Q6PIW4 674 aa5.48□□□□□ -1.53
USP39-213ENST00000467885 ANGPTL8Q6UXH0 198 aa5.48□□□□□ -1.53
USP39-213ENST00000467885 APOOLQ6UXV4 268 aa5.48□□□□□ -1.53
USP39-213ENST00000467885 FRRS1Q6ZNA5 592 aa5.48□□□□□ -1.53
USP39-213ENST00000467885 CBLL1Q75N03 491 aa5.48□□□□□ -1.53
USP39-213ENST00000467885 SLC29A4Q7RTT9 530 aa5.48□□□□□ -1.53
USP39-213ENST00000467885 NUP54Q7Z3B4 507 aa5.48□□□□□ -1.53
USP39-213ENST00000467885 SZRD1Q7Z422 152 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms