RNA–Protein interactions for RNA: ENST00000452489.6

PTPA-223, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-223ENST00000452489 KPNA3O00505 521 aaPredicted RBP17.54■□□□□ 0.4
PTPA-223ENST00000452489 ADCYAP1P18509 176 aa17.54■□□□□ 0.4
PTPA-223ENST00000452489 LPOP22079 712 aaPredicted RBP17.54■□□□□ 0.4
PTPA-223ENST00000452489 PPIBP23284 216 aaKnown RBP17.54■□□□□ 0.4
PTPA-223ENST00000452489 PRPH2P23942 346 aa17.54■□□□□ 0.4
PTPA-223ENST00000452489 RGRP47804 291 aa17.54■□□□□ 0.4
PTPA-223ENST00000452489 LSM11P83369 360 aaKnown RBP eCLIP17.54■□□□□ 0.4
PTPA-223ENST00000452489 TRAM2Q15035 370 aa17.54■□□□□ 0.4
PTPA-223ENST00000452489 ZXDCQ2QGD7 858 aaPredicted RBP17.54■□□□□ 0.4
PTPA-223ENST00000452489 MINDY4Q4G0A6 757 aa17.54■□□□□ 0.4
PTPA-223ENST00000452489 DCST1Q5T197 706 aa17.54■□□□□ 0.4
PTPA-223ENST00000452489 SFXN4Q6P4A7 337 aa17.54■□□□□ 0.4
PTPA-223ENST00000452489 KLBQ86Z14 1044 aa17.54■□□□□ 0.4
PTPA-223ENST00000452489 IZUMO1Q8IYV9 350 aa17.54■□□□□ 0.4
PTPA-223ENST00000452489 SPICQ8N5J4 248 aa17.54■□□□□ 0.4
PTPA-223ENST00000452489 MEIOBQ8N635 442 aa17.54■□□□□ 0.4
PTPA-223ENST00000452489 FBXO15Q8NCQ5 510 aaPredicted RBP17.54■□□□□ 0.4
PTPA-223ENST00000452489 OR5AK3PQ8NH89 298 aa17.54■□□□□ 0.4
PTPA-223ENST00000452489 SPRYD4Q8WW59 207 aaPredicted RBP17.54■□□□□ 0.4
PTPA-223ENST00000452489 FATE1Q969F0 183 aa17.54■□□□□ 0.4
PTPA-223ENST00000452489 TCEAL4Q96EI5 215 aa17.54■□□□□ 0.4
PTPA-223ENST00000452489 WDR77Q9BQA1 342 aaPredicted RBP17.54■□□□□ 0.4
PTPA-223ENST00000452489 ZYG11BQ9C0D3 744 aa17.54■□□□□ 0.4
PTPA-223ENST00000452489 FN3KQ9H479 309 aa17.54■□□□□ 0.4
PTPA-223ENST00000452489 EXOSC1Q9Y3B2 195 aaKnown RBP17.54■□□□□ 0.4
PTPA-223ENST00000452489 SCAMP2O15127 329 aaKnown RBP17.53■□□□□ 0.4
PTPA-223ENST00000452489 PRAMEF4O60810 478 aa17.53■□□□□ 0.4
PTPA-223ENST00000452489 F12P00748 615 aaPredicted RBP17.53■□□□□ 0.4
PTPA-223ENST00000452489 POMCP01189 267 aa17.53■□□□□ 0.4
PTPA-223ENST00000452489 PRR5P85299 388 aa17.53■□□□□ 0.4
PTPA-223ENST00000452489 SLC25A35Q3KQZ1 300 aa17.53■□□□□ 0.4
PTPA-223ENST00000452489 PRAMEF9Q5VWM5 478 aa17.53■□□□□ 0.4
PTPA-223ENST00000452489 FAM109BQ6ICB4 259 aaPredicted RBP17.53■□□□□ 0.4
PTPA-223ENST00000452489 MEX3DQ86XN8 651 aaKnown RBP17.53■□□□□ 0.4
PTPA-223ENST00000452489 CHST14Q8NCH0 376 aa17.53■□□□□ 0.4
PTPA-223ENST00000452489 GPR156Q8NFN8 814 aa17.53■□□□□ 0.4
PTPA-223ENST00000452489 OR4K1Q8NGD4 311 aa17.53■□□□□ 0.4
PTPA-223ENST00000452489 ELP5Q8TE02 316 aa17.53■□□□□ 0.4
PTPA-223ENST00000452489 UBTD2Q8WUN7 234 aa17.53■□□□□ 0.4
PTPA-223ENST00000452489 FAIM2Q9BWQ8 316 aa17.53■□□□□ 0.4
PTPA-223ENST00000452489 PRDM5Q9NQX1 630 aaPredicted RBP17.53■□□□□ 0.4
PTPA-223ENST00000452489 ZNF275Q9NSD4 429 aaPredicted RBP17.53■□□□□ 0.4
PTPA-223ENST00000452489 CENPFP49454 3210 aa17.53■□□□□ 0.4
PTPA-223ENST00000452489 MTMR11A4FU01 709 aa17.53■□□□□ 0.4
PTPA-223ENST00000452489 OR2A4O95047 310 aa17.53■□□□□ 0.4
PTPA-223ENST00000452489 S100A8P05109 93 aa17.53■□□□□ 0.4
PTPA-223ENST00000452489 GAAP10253 952 aa17.53■□□□□ 0.4
PTPA-223ENST00000452489 PRF1P14222 555 aa17.53■□□□□ 0.4
PTPA-223ENST00000452489 RHOQP17081 205 aa17.53■□□□□ 0.4
PTPA-223ENST00000452489 MAT1AQ00266 395 aaKnown RBP17.53■□□□□ 0.4
PTPA-223ENST00000452489 SLC22A10Q63ZE4 541 aa17.53■□□□□ 0.4
PTPA-223ENST00000452489 PRICKLE2Q7Z3G6 844 aa17.53■□□□□ 0.4
PTPA-223ENST00000452489 RBM45Q8IUH3 476 aaKnown RBP17.53■□□□□ 0.4
PTPA-223ENST00000452489 TMEM185AQ8NFB2 350 aa17.53■□□□□ 0.4
PTPA-223ENST00000452489 KAT2AQ92830 837 aa17.53■□□□□ 0.4
PTPA-223ENST00000452489 GCDHQ92947 438 aaPredicted RBP17.53■□□□□ 0.4
PTPA-223ENST00000452489 IGSF8Q969P0 613 aa17.53■□□□□ 0.4
PTPA-223ENST00000452489 FBXO17Q96EF6 278 aa17.53■□□□□ 0.4
PTPA-223ENST00000452489 OR2A7Q96R45 310 aa17.53■□□□□ 0.4
PTPA-223ENST00000452489 GMLQ99445 158 aa17.53■□□□□ 0.4
PTPA-223ENST00000452489 CINPQ9BW66 212 aaPredicted RBP17.53■□□□□ 0.4
PTPA-223ENST00000452489 GSDMCQ9BYG8 508 aa17.53■□□□□ 0.4
PTPA-223ENST00000452489 GHRLQ9UBU3 117 aa17.53■□□□□ 0.4
PTPA-223ENST00000452489 AFF4Q9UHB7 1163 aaKnown RBP17.53■□□□□ 0.4
PTPA-223ENST00000452489 FBXW2Q9UKT8 454 aa17.53■□□□□ 0.4
PTPA-223ENST00000452489 OR10H1Q9Y4A9 318 aa17.53■□□□□ 0.4
PTPA-223ENST00000452489 A0A1B0GUH1 482 aa17.52■□□□□ 0.4
PTPA-223ENST00000452489 EFCAB14O75071 495 aa17.52■□□□□ 0.4
PTPA-223ENST00000452489 NFATC1O95644 943 aa17.52■□□□□ 0.4
PTPA-223ENST00000452489 ZNF286BP0CG31 522 aa17.52■□□□□ 0.4
PTPA-223ENST00000452489 ANXA7P20073 488 aaKnown RBP17.52■□□□□ 0.4
PTPA-223ENST00000452489 MTNR1BP49286 362 aa17.52■□□□□ 0.4
PTPA-223ENST00000452489 MMP15P51511 669 aa17.52■□□□□ 0.4
PTPA-223ENST00000452489 MLLT1Q03111 559 aaPredicted RBP17.52■□□□□ 0.4
PTPA-223ENST00000452489 DDX39BQ13838 428 aaKnown RBP17.52■□□□□ 0.4
PTPA-223ENST00000452489 C9orf152Q5JTZ5 239 aa17.52■□□□□ 0.4
PTPA-223ENST00000452489 ACER2Q5QJU3 275 aa17.52■□□□□ 0.4
PTPA-223ENST00000452489 C18orf63Q68DL7 685 aa17.52■□□□□ 0.4
PTPA-223ENST00000452489 ZNF425Q6IV72 752 aa17.52■□□□□ 0.4
PTPA-223ENST00000452489 MRPL10Q7Z7H8 261 aaKnown RBP17.52■□□□□ 0.4
PTPA-223ENST00000452489 SVBPQ8N300 66 aa17.52■□□□□ 0.4
PTPA-223ENST00000452489 SMAD5Q99717 465 aaKnown RBP17.52■□□□□ 0.4
PTPA-223ENST00000452489 SLC35A5Q9BS91 424 aa17.52■□□□□ 0.4
PTPA-223ENST00000452489 ENKD1Q9H0I2 346 aa17.52■□□□□ 0.4
PTPA-223ENST00000452489 SLC25A32Q9H2D1 315 aa17.52■□□□□ 0.4
PTPA-223ENST00000452489 MVB12BQ9H7P6 319 aa17.52■□□□□ 0.4
PTPA-223ENST00000452489 SEPT4O43236 478 aa17.52■□□□□ 0.39
PTPA-223ENST00000452489 PRODHO43272 600 aa17.52■□□□□ 0.39
PTPA-223ENST00000452489 GIPRP48546 466 aa17.52■□□□□ 0.39
PTPA-223ENST00000452489 ARFIP1P53367 373 aa17.52■□□□□ 0.39
PTPA-223ENST00000452489 HBA1P69905 142 aa17.52■□□□□ 0.39
PTPA-223ENST00000452489 EEF1A2Q05639 463 aaKnown RBP17.52■□□□□ 0.39
PTPA-223ENST00000452489 CCDC157Q569K6 752 aa17.52■□□□□ 0.39
PTPA-223ENST00000452489 DHRS7BQ6IAN0 325 aaPredicted RBP17.52■□□□□ 0.39
PTPA-223ENST00000452489 MACC1Q6ZN28 852 aa17.52■□□□□ 0.39
PTPA-223ENST00000452489 ZNF683Q8IZ20 524 aa17.52■□□□□ 0.39
PTPA-223ENST00000452489 THAP6Q8TBB0 222 aa17.52■□□□□ 0.39
PTPA-223ENST00000452489 PAWRQ96IZ0 340 aaKnown RBP17.52■□□□□ 0.39
PTPA-223ENST00000452489 ART5Q96L15 291 aa17.52■□□□□ 0.39
PTPA-223ENST00000452489 TMEM248Q9NWD8 314 aa17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms