RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 PLXDC2Q6UX71 529 aa18.77■□□□□ 0.6
CPNE1-219ENST00000440240 MEIOBQ8N635 442 aa18.77■□□□□ 0.6
CPNE1-219ENST00000440240 OR4N2Q8NGD1 307 aa18.77■□□□□ 0.6
CPNE1-219ENST00000440240 EBPLQ9BY08 206 aa18.77■□□□□ 0.6
CPNE1-219ENST00000440240 MIEF1Q9NQG6 463 aa18.77■□□□□ 0.6
CPNE1-219ENST00000440240 MRTO4Q9UKD2 239 aaKnown RBP18.77■□□□□ 0.6
CPNE1-219ENST00000440240 EIF3LQ9Y262 564 aaKnown RBP18.77■□□□□ 0.6
CPNE1-219ENST00000440240 A0A1W2PNV4 684 aa18.76■□□□□ 0.59
CPNE1-219ENST00000440240 H3BQF6 201 aa18.76■□□□□ 0.59
CPNE1-219ENST00000440240 GOLGA8RI6L899 631 aa18.76■□□□□ 0.59
CPNE1-219ENST00000440240 TGM6O95932 706 aa18.76■□□□□ 0.59
CPNE1-219ENST00000440240 EVI2BP34910 448 aa18.76■□□□□ 0.59
CPNE1-219ENST00000440240 CLK3P49761 638 aaKnown RBP18.76■□□□□ 0.59
CPNE1-219ENST00000440240 NCBP2P52298 156 aaKnown RBP eCLIP18.76■□□□□ 0.599e-8■□□□□ 9.8
CPNE1-219ENST00000440240 B3GALT5-AS1P59052 145 aa18.76■□□□□ 0.59
CPNE1-219ENST00000440240 NAA20P61599 178 aa18.76■□□□□ 0.59
CPNE1-219ENST00000440240 ZNF155Q12901 538 aaPredicted RBP18.76■□□□□ 0.59
CPNE1-219ENST00000440240 DECR1Q16698 335 aa18.76■□□□□ 0.59
CPNE1-219ENST00000440240 SH2D4BQ5SQS7 431 aa18.76■□□□□ 0.59
CPNE1-219ENST00000440240 IFT20Q8IY31 132 aa18.76■□□□□ 0.59
CPNE1-219ENST00000440240 FADS6Q8N9I5 356 aa18.76■□□□□ 0.59
CPNE1-219ENST00000440240 FAM76AQ8TAV0 307 aa18.76■□□□□ 0.59
CPNE1-219ENST00000440240 KCNA7Q96RP8 456 aa18.76■□□□□ 0.59
CPNE1-219ENST00000440240 DSN1Q9H410 356 aa18.76■□□□□ 0.59
CPNE1-219ENST00000440240 PTGES2Q9H7Z7 377 aa18.76■□□□□ 0.59
CPNE1-219ENST00000440240 MID1IP1Q9NPA3 183 aa18.76■□□□□ 0.59
CPNE1-219ENST00000440240 ABCG2Q9UNQ0 655 aa18.76■□□□□ 0.59
CPNE1-219ENST00000440240 C19orf53Q9UNZ5 99 aaPredicted RBP18.76■□□□□ 0.59
CPNE1-219ENST00000440240 MED12LQ86YW9 2145 aa18.76■□□□□ 0.59
CPNE1-219ENST00000440240 SLC22A20A6NK97 555 aa18.75■□□□□ 0.59
CPNE1-219ENST00000440240 RIPK2O43353 540 aa18.75■□□□□ 0.59
CPNE1-219ENST00000440240 FADS1O60427 444 aa18.75■□□□□ 0.59
CPNE1-219ENST00000440240 JUNP05412 331 aaKnown RBP18.75■□□□□ 0.59
CPNE1-219ENST00000440240 PYGBP11216 843 aa18.75■□□□□ 0.59
CPNE1-219ENST00000440240 TCEA1P23193 301 aaKnown RBP18.75■□□□□ 0.59
CPNE1-219ENST00000440240 HOXC12P31275 282 aa18.75■□□□□ 0.59
CPNE1-219ENST00000440240 GANABQ14697 944 aaKnown RBP18.75■□□□□ 0.59
CPNE1-219ENST00000440240 POU4F3Q15319 338 aa18.75■□□□□ 0.59
CPNE1-219ENST00000440240 ZNHIT3Q15649 155 aaPredicted RBP18.75■□□□□ 0.59
CPNE1-219ENST00000440240 IMPG1Q17R60 797 aa18.75■□□□□ 0.59
CPNE1-219ENST00000440240 UBQLNLQ8IYU4 475 aa18.75■□□□□ 0.59
CPNE1-219ENST00000440240 CCNYL1Q8N7R7 359 aa18.75■□□□□ 0.59
CPNE1-219ENST00000440240 OR2M3Q8NG83 312 aa18.75■□□□□ 0.59
CPNE1-219ENST00000440240 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.75■□□□□ 0.598e-8■■■■■ 32.7
CPNE1-219ENST00000440240 GSTO2Q9H4Y5 243 aa18.75■□□□□ 0.59
CPNE1-219ENST00000440240 Q9N2J8 555 aa18.75■□□□□ 0.59
CPNE1-219ENST00000440240 BEX4Q9NWD9 120 aaPredicted RBP18.75■□□□□ 0.59
CPNE1-219ENST00000440240 SCO2O43819 266 aa18.74■□□□□ 0.59
CPNE1-219ENST00000440240 TNFRSF21O75509 655 aa18.74■□□□□ 0.59
CPNE1-219ENST00000440240 SMNDC1O75940 238 aaKnown RBP eCLIP18.74■□□□□ 0.59
CPNE1-219ENST00000440240 HOXB4P17483 251 aaPredicted RBP18.74■□□□□ 0.59
CPNE1-219ENST00000440240 HK1P19367 917 aa18.74■□□□□ 0.59
CPNE1-219ENST00000440240 CD53P19397 219 aa18.74■□□□□ 0.59
CPNE1-219ENST00000440240 NTSP30990 170 aa18.74■□□□□ 0.59
CPNE1-219ENST00000440240 CPOXP36551 454 aa18.74■□□□□ 0.59
CPNE1-219ENST00000440240 MC3RP41968 323 aa18.74■□□□□ 0.59
CPNE1-219ENST00000440240 PSMD4P55036 377 aaKnown RBP18.74■□□□□ 0.59
CPNE1-219ENST00000440240 RAET1LQ5VY80 246 aa18.74■□□□□ 0.59
CPNE1-219ENST00000440240 FAM71E1Q6IPT2 247 aa18.74■□□□□ 0.59
CPNE1-219ENST00000440240 TRIM46Q7Z4K8 759 aa18.74■□□□□ 0.59
CPNE1-219ENST00000440240 CNEP1R1Q8N9A8 125 aa18.74■□□□□ 0.59
CPNE1-219ENST00000440240 CDC26Q8NHZ8 85 aa18.74■□□□□ 0.59
CPNE1-219ENST00000440240 STARD4Q96DR4 205 aa18.74■□□□□ 0.59
CPNE1-219ENST00000440240 MYNNQ9NPC7 610 aa18.74■□□□□ 0.59
CPNE1-219ENST00000440240 DDX18Q9NVP1 670 aaKnown RBP18.74■□□□□ 0.59
CPNE1-219ENST00000440240 PSMC3IPQ9P2W1 217 aaPredicted RBP18.74■□□□□ 0.59
CPNE1-219ENST00000440240 B4DXG7 233 aa18.73■□□□□ 0.59
CPNE1-219ENST00000440240 UPK1AO00322 258 aa18.73■□□□□ 0.59
CPNE1-219ENST00000440240 FOXA1P55317 472 aa18.73■□□□□ 0.59
CPNE1-219ENST00000440240 FAM27E3Q08E93 113 aa18.73■□□□□ 0.59
CPNE1-219ENST00000440240 SLC29A2Q14542 456 aa18.73■□□□□ 0.59
CPNE1-219ENST00000440240 TMEM107Q6UX40 140 aa18.73■□□□□ 0.59
CPNE1-219ENST00000440240 OR2L13Q8N349 312 aa18.73■□□□□ 0.59
CPNE1-219ENST00000440240 WFDC11Q8NEX6 87 aa18.73■□□□□ 0.59
CPNE1-219ENST00000440240 DUSP19Q8WTR2 217 aa18.73■□□□□ 0.59
CPNE1-219ENST00000440240 ELP4Q96EB1 424 aa18.73■□□□□ 0.59
CPNE1-219ENST00000440240 SLC39A3Q9BRY0 314 aa18.73■□□□□ 0.59
CPNE1-219ENST00000440240 GSX1Q9H4S2 264 aaPredicted RBP18.73■□□□□ 0.59
CPNE1-219ENST00000440240 C3orf14Q9HBI5 128 aa18.73■□□□□ 0.59
CPNE1-219ENST00000440240 RRAGDQ9NQL2 400 aaPredicted RBP18.73■□□□□ 0.59
CPNE1-219ENST00000440240 FAM120CQ9NX05 1096 aaKnown RBP18.73■□□□□ 0.59
CPNE1-219ENST00000440240 ZNF226Q9NYT6 803 aa18.73■□□□□ 0.59
CPNE1-219ENST00000440240 MED11Q9P086 117 aa18.73■□□□□ 0.59
CPNE1-219ENST00000440240 ZNF337Q9Y3M9 751 aa18.73■□□□□ 0.59
CPNE1-219ENST00000440240 TESMINQ9Y4I5 508 aa18.73■□□□□ 0.59
CPNE1-219ENST00000440240 VPS13CQ709C8 3753 aa18.72■□□□□ 0.59
CPNE1-219ENST00000440240 TTC36A6NLP5 189 aa18.72■□□□□ 0.59
CPNE1-219ENST00000440240 UBFD1O14562 309 aaKnown RBP18.72■□□□□ 0.59
CPNE1-219ENST00000440240 CRCPO75575 148 aa18.72■□□□□ 0.59
CPNE1-219ENST00000440240 PSMG1O95456 288 aa18.72■□□□□ 0.59
CPNE1-219ENST00000440240 IL33O95760 270 aa18.72■□□□□ 0.59
CPNE1-219ENST00000440240 MYL2P10916 166 aa18.72■□□□□ 0.59
CPNE1-219ENST00000440240 CD79BP40259 229 aa18.72■□□□□ 0.59
CPNE1-219ENST00000440240 FGFBP1Q14512 234 aa18.72■□□□□ 0.59
CPNE1-219ENST00000440240 PRSS53Q2L4Q9 553 aa18.72■□□□□ 0.59
CPNE1-219ENST00000440240 GLYR1Q49A26 553 aaPredicted RBP18.72■□□□□ 0.59
CPNE1-219ENST00000440240 SHEQ5VZ18 495 aa18.72■□□□□ 0.59
CPNE1-219ENST00000440240 IKBIPQ70UQ0 350 aa18.72■□□□□ 0.59
CPNE1-219ENST00000440240 BIVMQ86UB2 503 aa18.72■□□□□ 0.59
CPNE1-219ENST00000440240 PGM2Q96G03 612 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms