RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 HSPBAP1Q96EW2 488 aa18.33■□□□□ 0.52
PDLIM2-221ENST00000622702 OTUB1Q96FW1 271 aaPredicted RBP18.33■□□□□ 0.52
PDLIM2-221ENST00000622702 ZNF71Q9NQZ8 489 aaPredicted RBP18.33■□□□□ 0.52
PDLIM2-221ENST00000622702 TMEM181Q9P2C4 612 aa18.33■□□□□ 0.52
PDLIM2-221ENST00000622702 L3MBTL1Q9Y468 752 aa18.33■□□□□ 0.52
PDLIM2-221ENST00000622702 PCDHGB3Q9Y5G1 929 aa18.33■□□□□ 0.52
PDLIM2-221ENST00000622702 EIF4E1BA6NMX2 242 aaKnown RBP18.32■□□□□ 0.52
PDLIM2-221ENST00000622702 A8MUI8 341 aa18.32■□□□□ 0.52
PDLIM2-221ENST00000622702 MLF1P58340 268 aa18.32■□□□□ 0.52
PDLIM2-221ENST00000622702 DSTNP60981 165 aa18.32■□□□□ 0.52
PDLIM2-221ENST00000622702 LACTB2Q53H82 288 aaPredicted RBP18.32■□□□□ 0.52
PDLIM2-221ENST00000622702 PIGGQ5H8A4 983 aa18.32■□□□□ 0.52
PDLIM2-221ENST00000622702 HEPHL1Q6MZM0 1159 aa18.32■□□□□ 0.52
PDLIM2-221ENST00000622702 NET1Q7Z628 596 aaPredicted RBP18.32■□□□□ 0.52
PDLIM2-221ENST00000622702 CALHM3Q86XJ0 350 aa18.32■□□□□ 0.52
PDLIM2-221ENST00000622702 COX18Q8N8Q8 333 aa18.32■□□□□ 0.52
PDLIM2-221ENST00000622702 OR10A6Q8NH74 314 aa18.32■□□□□ 0.52
PDLIM2-221ENST00000622702 CDS1Q92903 461 aa18.32■□□□□ 0.52
PDLIM2-221ENST00000622702 RAB8BQ92930 207 aa18.32■□□□□ 0.52
PDLIM2-221ENST00000622702 ECSITQ9BQ95 431 aa18.32■□□□□ 0.52
PDLIM2-221ENST00000622702 BTBD10Q9BSF8 475 aa18.32■□□□□ 0.52
PDLIM2-221ENST00000622702 SPATA9Q9BWV2 254 aa18.32■□□□□ 0.52
PDLIM2-221ENST00000622702 BTBD2Q9BX70 525 aa18.32■□□□□ 0.52
PDLIM2-221ENST00000622702 SLC25A18Q9H1K4 315 aa18.32■□□□□ 0.52
PDLIM2-221ENST00000622702 LIN28AQ9H9Z2 209 aaKnown RBP18.32■□□□□ 0.52
PDLIM2-221ENST00000622702 EXD2Q9NVH0 621 aa18.32■□□□□ 0.52
PDLIM2-221ENST00000622702 GPR83Q9NYM4 423 aa18.32■□□□□ 0.52
PDLIM2-221ENST00000622702 TP53TG5Q9Y2B4 290 aa18.32■□□□□ 0.52
PDLIM2-221ENST00000622702 PCDHGA9Q9Y5G4 932 aaKnown RBP18.32■□□□□ 0.52
PDLIM2-221ENST00000622702 K7EM74 188 aa18.31■□□□□ 0.52
PDLIM2-221ENST00000622702 WWP2O00308 870 aa18.31■□□□□ 0.52
PDLIM2-221ENST00000622702 NME4O00746 187 aa18.31■□□□□ 0.52
PDLIM2-221ENST00000622702 NADKO95544 446 aaPredicted RBP18.31■□□□□ 0.52
PDLIM2-221ENST00000622702 PRB1P04280 392 aa18.31■□□□□ 0.52
PDLIM2-221ENST00000622702 SOX11P35716 441 aa18.31■□□□□ 0.52
PDLIM2-221ENST00000622702 PIGAP37287 484 aa18.31■□□□□ 0.52
PDLIM2-221ENST00000622702 GZMMP51124 257 aa18.31■□□□□ 0.52
PDLIM2-221ENST00000622702 NNATQ16517 81 aa18.31■□□□□ 0.52
PDLIM2-221ENST00000622702 DNAL1Q4LDG9 190 aa18.31■□□□□ 0.52
PDLIM2-221ENST00000622702 C16orf47Q6ZP98 133 aaPredicted RBP18.31■□□□□ 0.52
PDLIM2-221ENST00000622702 YTHDF3Q7Z739 585 aaKnown RBP18.31■□□□□ 0.52
PDLIM2-221ENST00000622702 TAGAPQ8N103 731 aa18.31■□□□□ 0.52
PDLIM2-221ENST00000622702 SLC15A4Q8N697 577 aa18.31■□□□□ 0.52
PDLIM2-221ENST00000622702 SIRT6Q8N6T7 355 aa18.31■□□□□ 0.52
PDLIM2-221ENST00000622702 CHDHQ8NE62 594 aaPredicted RBP18.31■□□□□ 0.52
PDLIM2-221ENST00000622702 XAGE5Q8WWM1 108 aa18.31■□□□□ 0.52
PDLIM2-221ENST00000622702 PIK3R3Q92569 461 aa18.31■□□□□ 0.52
PDLIM2-221ENST00000622702 ZNF354BQ96LW1 612 aa18.31■□□□□ 0.52
PDLIM2-221ENST00000622702 ZNF583Q96ND8 569 aa18.31■□□□□ 0.52
PDLIM2-221ENST00000622702 CDCP1Q9H5V8 836 aa18.31■□□□□ 0.52
PDLIM2-221ENST00000622702 TMEM38AQ9H6F2 299 aa18.31■□□□□ 0.52
PDLIM2-221ENST00000622702 TEKT2Q9UIF3 430 aa18.31■□□□□ 0.52
PDLIM2-221ENST00000622702 LIPT1Q9Y234 373 aa18.31■□□□□ 0.52
PDLIM2-221ENST00000622702 YARS2Q9Y2Z4 477 aaKnown RBP18.31■□□□□ 0.52
PDLIM2-221ENST00000622702 OR10H1Q9Y4A9 318 aa18.31■□□□□ 0.52
PDLIM2-221ENST00000622702 KCNE3Q9Y6H6 103 aa18.31■□□□□ 0.52
PDLIM2-221ENST00000622702 TNRC6AQ8NDV7 1962 aaKnown RBP18.3■□□□□ 0.52
PDLIM2-221ENST00000622702 TLN1Q9Y490 2541 aaKnown RBP18.3■□□□□ 0.52
PDLIM2-221ENST00000622702 GXYLT2A0PJZ3 443 aa18.3■□□□□ 0.52
PDLIM2-221ENST00000622702 A8MVJ9 347 aa18.3■□□□□ 0.52
PDLIM2-221ENST00000622702 GYG2O15488 501 aa18.3■□□□□ 0.52
PDLIM2-221ENST00000622702 DNAJA2O60884 412 aa18.3■□□□□ 0.52
PDLIM2-221ENST00000622702 ITGA10O75578 1167 aa18.3■□□□□ 0.52
PDLIM2-221ENST00000622702 OR2J2O76002 312 aa18.3■□□□□ 0.52
PDLIM2-221ENST00000622702 AK1P00568 194 aa18.3■□□□□ 0.52
PDLIM2-221ENST00000622702 NUDT7P0C024 238 aa18.3■□□□□ 0.52
PDLIM2-221ENST00000622702 NRG3P56975 720 aa18.3■□□□□ 0.52
PDLIM2-221ENST00000622702 EEFSECP57772 596 aaKnown RBP18.3■□□□□ 0.52
PDLIM2-221ENST00000622702 POU6F2P78424 691 aaPredicted RBP18.3■□□□□ 0.52
PDLIM2-221ENST00000622702 MRPS22P82650 360 aaKnown RBP18.3■□□□□ 0.52
PDLIM2-221ENST00000622702 ADRM1Q16186 407 aa18.3■□□□□ 0.52
PDLIM2-221ENST00000622702 MEP1AQ16819 746 aa18.3■□□□□ 0.52
PDLIM2-221ENST00000622702 CRB2Q5IJ48 1285 aa18.3■□□□□ 0.52
PDLIM2-221ENST00000622702 ACER2Q5QJU3 275 aa18.3■□□□□ 0.52
PDLIM2-221ENST00000622702 GCNT6Q5T4J0 391 aa18.3■□□□□ 0.52
PDLIM2-221ENST00000622702 ATAD3BQ5T9A4 648 aa18.3■□□□□ 0.52
PDLIM2-221ENST00000622702 B3GNTL1Q67FW5 361 aaPredicted RBP18.3■□□□□ 0.52
PDLIM2-221ENST00000622702 FCRLBQ6BAA4 426 aa18.3■□□□□ 0.52
PDLIM2-221ENST00000622702 BNC2Q6ZN30 1099 aaPredicted RBP18.3■□□□□ 0.52
PDLIM2-221ENST00000622702 ARHGAP24Q8N264 748 aa18.3■□□□□ 0.52
PDLIM2-221ENST00000622702 OR4N2Q8NGD1 307 aa18.3■□□□□ 0.52
PDLIM2-221ENST00000622702 SLC22A8Q8TCC7 542 aa18.3■□□□□ 0.52
PDLIM2-221ENST00000622702 RASL10BQ96S79 203 aa18.3■□□□□ 0.52
PDLIM2-221ENST00000622702 CDRT15Q96T59 188 aa18.3■□□□□ 0.52
PDLIM2-221ENST00000622702 A4GALTQ9NPC4 353 aa18.3■□□□□ 0.52
PDLIM2-221ENST00000622702 CBLCQ9ULV8 474 aa18.3■□□□□ 0.52
PDLIM2-221ENST00000622702 PRPF19Q9UMS4 504 aaKnown RBP18.3■□□□□ 0.52
PDLIM2-221ENST00000622702 CNTRLQ7Z7A1 2325 aa18.3■□□□□ 0.52
PDLIM2-221ENST00000622702 CFAP46Q8IYW2 2715 aa18.29■□□□□ 0.52
PDLIM2-221ENST00000622702 PRAMEF27A3QJZ7 478 aa18.29■□□□□ 0.52
PDLIM2-221ENST00000622702 MAN1A2O60476 641 aa18.29■□□□□ 0.52
PDLIM2-221ENST00000622702 ZNF354AO60765 605 aaPredicted RBP18.29■□□□□ 0.52
PDLIM2-221ENST00000622702 PDGFAP04085 211 aa18.29■□□□□ 0.52
PDLIM2-221ENST00000622702 NAGAP17050 411 aa18.29■□□□□ 0.52
PDLIM2-221ENST00000622702 ABCD3P28288 659 aa18.29■□□□□ 0.52
PDLIM2-221ENST00000622702 NCALDP61601 193 aa18.29■□□□□ 0.52
PDLIM2-221ENST00000622702 LIPEQ05469 1076 aa18.29■□□□□ 0.52
PDLIM2-221ENST00000622702 RBBP4Q09028 425 aa18.29■□□□□ 0.52
PDLIM2-221ENST00000622702 FUT5Q11128 374 aa18.29■□□□□ 0.52
PDLIM2-221ENST00000622702 ZSCAN26Q16670 478 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms