RNA–Protein interactions for RNA: ENST00000639470.1

COLCA2-207, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best)

Gene COLCA2, Length 1,207 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-207ENST00000639470 DNAJB13P59910 316 aa14.91□□□□□ -0.02
COLCA2-207ENST00000639470 SLC18A2Q05940 514 aa14.91□□□□□ -0.02
COLCA2-207ENST00000639470 ZNF155Q12901 538 aaPredicted RBP14.91□□□□□ -0.02
COLCA2-207ENST00000639470 CEBPEQ15744 281 aa14.91□□□□□ -0.02
COLCA2-207ENST00000639470 CFAP157Q5JU67 520 aa14.91□□□□□ -0.02
COLCA2-207ENST00000639470 RIPPLY2Q5TAB7 128 aa14.91□□□□□ -0.02
COLCA2-207ENST00000639470 NOXRED1Q6NXP6 359 aa14.91□□□□□ -0.02
COLCA2-207ENST00000639470 FAM9CQ8IZT9 166 aa14.91□□□□□ -0.02
COLCA2-207ENST00000639470 NUDT8Q8WV74 236 aa14.91□□□□□ -0.02
COLCA2-207ENST00000639470 COL21A1Q96P44 957 aa14.91□□□□□ -0.02
COLCA2-207ENST00000639470 BBS4Q96RK4 519 aa14.91□□□□□ -0.02
COLCA2-207ENST00000639470 TRIB1Q96RU8 372 aa14.91□□□□□ -0.02
COLCA2-207ENST00000639470 MCCC2Q9HCC0 563 aa14.91□□□□□ -0.02
COLCA2-207ENST00000639470 PRODH2Q9UF12 536 aa14.91□□□□□ -0.02
COLCA2-207ENST00000639470 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.91□□□□□ -0.02
COLCA2-207ENST00000639470 GRID1Q9ULK0 1009 aa14.91□□□□□ -0.02
COLCA2-207ENST00000639470 L3MBTL1Q9Y468 752 aa14.91□□□□□ -0.02
COLCA2-207ENST00000639470 V9GYY5 206 aaPredicted RBP14.91□□□□□ -0.02
COLCA2-207ENST00000639470 PHF3Q92576 2039 aaKnown RBP14.91□□□□□ -0.02
COLCA2-207ENST00000639470 HCFC1P51610 2035 aa14.9□□□□□ -0.02
COLCA2-207ENST00000639470 SERTM1A2A2V5 107 aa14.9□□□□□ -0.02
COLCA2-207ENST00000639470 ACOX3O15254 700 aa14.9□□□□□ -0.02
COLCA2-207ENST00000639470 AKAP10O43572 662 aa14.9□□□□□ -0.02
COLCA2-207ENST00000639470 CRCPO75575 148 aa14.9□□□□□ -0.02
COLCA2-207ENST00000639470 LINC00032P0C843 101 aa14.9□□□□□ -0.02
COLCA2-207ENST00000639470 CYP4B1P13584 511 aa14.9□□□□□ -0.02
COLCA2-207ENST00000639470 GABRA1P14867 456 aa14.9□□□□□ -0.02
COLCA2-207ENST00000639470 ELAVL4P26378 380 aaKnown RBP14.9□□□□□ -0.02
COLCA2-207ENST00000639470 ARRB2P32121 409 aa14.9□□□□□ -0.02
COLCA2-207ENST00000639470 PSG6Q00889 435 aa14.9□□□□□ -0.02
COLCA2-207ENST00000639470 SRYQ05066 204 aa14.9□□□□□ -0.02
COLCA2-207ENST00000639470 HEPACAMQ14CZ8 416 aa14.9□□□□□ -0.02
COLCA2-207ENST00000639470 KIAA0040Q15053 153 aa14.9□□□□□ -0.02
COLCA2-207ENST00000639470 CCDC153Q494R4 210 aa14.9□□□□□ -0.02
COLCA2-207ENST00000639470 Q6ZSR9 355 aa14.9□□□□□ -0.02
COLCA2-207ENST00000639470 ZCCHC23Q6ZST2 131 aa14.9□□□□□ -0.02
COLCA2-207ENST00000639470 LARP4Q71RC2 724 aaKnown RBP eCLIP14.9□□□□□ -0.02
COLCA2-207ENST00000639470 ZNF551Q7Z340 670 aaPredicted RBP14.9□□□□□ -0.02
COLCA2-207ENST00000639470 TRIM46Q7Z4K8 759 aa14.9□□□□□ -0.02
COLCA2-207ENST00000639470 GALNT10Q86SR1 603 aa14.9□□□□□ -0.02
COLCA2-207ENST00000639470 C9orf106Q8NAJ2 232 aa14.9□□□□□ -0.02
COLCA2-207ENST00000639470 AGR3Q8TD06 166 aa14.9□□□□□ -0.02
COLCA2-207ENST00000639470 ABTB1Q969K4 478 aaPredicted RBP14.9□□□□□ -0.02
COLCA2-207ENST00000639470 CIDECQ96AQ7 238 aaPredicted RBP14.9□□□□□ -0.02
COLCA2-207ENST00000639470 G6PC3Q9BUM1 346 aa14.9□□□□□ -0.02
COLCA2-207ENST00000639470 PRDM14Q9GZV8 571 aa14.9□□□□□ -0.02
COLCA2-207ENST00000639470 MYNNQ9NPC7 610 aa14.9□□□□□ -0.02
COLCA2-207ENST00000639470 SIRT5Q9NXA8 310 aa14.9□□□□□ -0.02
COLCA2-207ENST00000639470 BAIAP2L1Q9UHR4 511 aa14.9□□□□□ -0.02
COLCA2-207ENST00000639470 CFL2Q9Y281 166 aa14.9□□□□□ -0.02
COLCA2-207ENST00000639470 STK38LQ9Y2H1 464 aa14.9□□□□□ -0.02
COLCA2-207ENST00000639470 INTS1Q8N201 2190 aaKnown RBP14.9□□□□□ -0.02
COLCA2-207ENST00000639470 FREM3P0C091 2139 aa14.89□□□□□ -0.03
COLCA2-207ENST00000639470 GXYLT2A0PJZ3 443 aa14.89□□□□□ -0.03
COLCA2-207ENST00000639470 UPK1AO00322 258 aa14.89□□□□□ -0.03
COLCA2-207ENST00000639470 SCO2O43819 266 aa14.89□□□□□ -0.03
COLCA2-207ENST00000639470 PLOD3O60568 738 aa14.89□□□□□ -0.03
COLCA2-207ENST00000639470 SEC22BO75396 215 aa14.89□□□□□ -0.03
COLCA2-207ENST00000639470 EPPINO95925 133 aa14.89□□□□□ -0.03
COLCA2-207ENST00000639470 NAGAP17050 411 aa14.89□□□□□ -0.03
COLCA2-207ENST00000639470 ALDH3A1P30838 453 aa14.89□□□□□ -0.03
COLCA2-207ENST00000639470 CEACAM8P31997 349 aaPredicted RBP14.89□□□□□ -0.03
COLCA2-207ENST00000639470 GAS1P54826 345 aa14.89□□□□□ -0.03
COLCA2-207ENST00000639470 FOXF2Q12947 444 aa14.89□□□□□ -0.03
COLCA2-207ENST00000639470 STX5Q13190 355 aa14.89□□□□□ -0.03
COLCA2-207ENST00000639470 MYBPHQ13203 477 aa14.89□□□□□ -0.03
COLCA2-207ENST00000639470 ERCC6LQ2NKX8 1250 aa14.89□□□□□ -0.03
COLCA2-207ENST00000639470 LIPMQ5VYY2 423 aa14.89□□□□□ -0.03
COLCA2-207ENST00000639470 SLC30A6Q6NXT4 461 aa14.89□□□□□ -0.03
COLCA2-207ENST00000639470 CDH24Q86UP0 819 aa14.89□□□□□ -0.03
COLCA2-207ENST00000639470 ZZZ3Q8IYH5 903 aa14.89□□□□□ -0.03
COLCA2-207ENST00000639470 EIF1ADQ8N9N8 165 aaKnown RBP14.89□□□□□ -0.03
COLCA2-207ENST00000639470 FBXO30Q8TB52 745 aa14.89□□□□□ -0.03
COLCA2-207ENST00000639470 CCDC126Q96EE4 140 aa14.89□□□□□ -0.03
COLCA2-207ENST00000639470 OTUB1Q96FW1 271 aaPredicted RBP14.89□□□□□ -0.03
COLCA2-207ENST00000639470 SLC35A4Q96G79 324 aa14.89□□□□□ -0.03
COLCA2-207ENST00000639470 AMDHD1Q96NU7 426 aa14.89□□□□□ -0.03
COLCA2-207ENST00000639470 TSSK3Q96PN8 268 aa14.89□□□□□ -0.03
COLCA2-207ENST00000639470 FAM111AQ96PZ2 611 aa14.89□□□□□ -0.03
COLCA2-207ENST00000639470 TUBA1CQ9BQE3 449 aa14.89□□□□□ -0.03
COLCA2-207ENST00000639470 MIEF1Q9NQG6 463 aa14.89□□□□□ -0.03
COLCA2-207ENST00000639470 GIMAP4Q9NUV9 329 aa14.89□□□□□ -0.03
COLCA2-207ENST00000639470 SENP1Q9P0U3 644 aa14.89□□□□□ -0.03
COLCA2-207ENST00000639470 RPH3AQ9Y2J0 694 aaPredicted RBP14.89□□□□□ -0.03
COLCA2-207ENST00000639470 OR6C70A6NIJ9 312 aa14.88□□□□□ -0.03
COLCA2-207ENST00000639470 RSL1D1O76021 490 aaKnown RBP14.88□□□□□ -0.03
COLCA2-207ENST00000639470 IGKV1D-16P01601 117 aa14.88□□□□□ -0.03
COLCA2-207ENST00000639470 UQCRC1P31930 480 aa14.88□□□□□ -0.03
COLCA2-207ENST00000639470 RFX3P48380 749 aa14.88□□□□□ -0.03
COLCA2-207ENST00000639470 CCT5P48643 541 aa14.88□□□□□ -0.03
COLCA2-207ENST00000639470 DCAF7P61962 342 aa14.88□□□□□ -0.03
COLCA2-207ENST00000639470 RPP38P78345 283 aaKnown RBP14.88□□□□□ -0.03
COLCA2-207ENST00000639470 HSPB3Q12988 150 aa14.88□□□□□ -0.03
COLCA2-207ENST00000639470 TMEM200AQ86VY9 491 aa14.88□□□□□ -0.03
COLCA2-207ENST00000639470 TRIM42Q8IWZ5 723 aa14.88□□□□□ -0.03
COLCA2-207ENST00000639470 BANPQ8N9N5 519 aa14.88□□□□□ -0.03
COLCA2-207ENST00000639470 OR5M1Q8NGP8 315 aa14.88□□□□□ -0.03
COLCA2-207ENST00000639470 OR14L1PQ8NHC6 308 aa14.88□□□□□ -0.03
COLCA2-207ENST00000639470 RNF138Q8WVD3 245 aa14.88□□□□□ -0.03
COLCA2-207ENST00000639470 SH3GL2Q99962 352 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms