RNA–Protein interactions for RNA: ENST00000519386.5

MRPS28-205, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2

Gene MRPS28, Length 555 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-205ENST00000519386 ITIH1P19827 911 aa6.76□□□□□ -1.33
MRPS28-205ENST00000519386 CSTF2P33240 577 aaKnown RBP eCLIP6.76□□□□□ -1.33
MRPS28-205ENST00000519386 GALNSP34059 522 aa6.76□□□□□ -1.33
MRPS28-205ENST00000519386 GTF2A1P52655 376 aaPredicted RBP6.76□□□□□ -1.33
MRPS28-205ENST00000519386 ADARB1P78563 741 aaKnown RBP6.76□□□□□ -1.33
MRPS28-205ENST00000519386 IGLV3-21P80748 117 aaPredicted RBP6.76□□□□□ -1.33
MRPS28-205ENST00000519386 KCNAB1Q14722 419 aa6.76□□□□□ -1.33
MRPS28-205ENST00000519386 EXOSC6Q5RKV6 272 aaKnown RBP6.76□□□□□ -1.33
MRPS28-205ENST00000519386 C6orf52Q5T4I8 152 aa6.76□□□□□ -1.33
MRPS28-205ENST00000519386 AP1ARQ63HQ0 302 aa6.76□□□□□ -1.33
MRPS28-205ENST00000519386 C18orf63Q68DL7 685 aa6.76□□□□□ -1.33
MRPS28-205ENST00000519386 ZNF595Q8IYB9 648 aa6.76□□□□□ -1.33
MRPS28-205ENST00000519386 OR4N4Q8N0Y3 316 aa6.76□□□□□ -1.33
MRPS28-205ENST00000519386 CLEC4FQ8N1N0 589 aa6.76□□□□□ -1.33
MRPS28-205ENST00000519386 CA13Q8N1Q1 262 aa6.76□□□□□ -1.33
MRPS28-205ENST00000519386 AGBL5Q8NDL9 886 aa6.76□□□□□ -1.33
MRPS28-205ENST00000519386 WDR36Q8NI36 951 aaKnown RBP6.76□□□□□ -1.33
MRPS28-205ENST00000519386 ZCCHC10Q8TBK6 192 aa6.76□□□□□ -1.33
MRPS28-205ENST00000519386 OIT3Q8WWZ8 545 aa6.76□□□□□ -1.33
MRPS28-205ENST00000519386 HOXB13Q92826 284 aaPredicted RBP6.76□□□□□ -1.33
MRPS28-205ENST00000519386 MAL2Q969L2 176 aa6.76□□□□□ -1.33
MRPS28-205ENST00000519386 NXPE2Q96DL1 559 aa6.76□□□□□ -1.33
MRPS28-205ENST00000519386 ELP4Q96EB1 424 aa6.76□□□□□ -1.33
MRPS28-205ENST00000519386 TMEM19Q96HH6 336 aa6.76□□□□□ -1.33
MRPS28-205ENST00000519386 CNTNAP3BQ96NU0 1288 aa6.76□□□□□ -1.33
MRPS28-205ENST00000519386 FCRL4Q96PJ5 515 aa6.76□□□□□ -1.33
MRPS28-205ENST00000519386 TRNT1Q96Q11 434 aaKnown RBP6.76□□□□□ -1.33
MRPS28-205ENST00000519386 ZNF300Q96RE9 604 aaPredicted RBP6.76□□□□□ -1.33
MRPS28-205ENST00000519386 UCN2Q96RP3 112 aa6.76□□□□□ -1.33
MRPS28-205ENST00000519386 CMKLR1Q99788 373 aa6.76□□□□□ -1.33
MRPS28-205ENST00000519386 TREX2Q9BQ50 279 aaPredicted RBP6.76□□□□□ -1.33
MRPS28-205ENST00000519386 ACTRT3Q9BYD9 372 aa6.76□□□□□ -1.33
MRPS28-205ENST00000519386 CNTNAP3Q9BZ76 1288 aa6.76□□□□□ -1.33
MRPS28-205ENST00000519386 FAM192AQ9GZU8 254 aa6.76□□□□□ -1.33
MRPS28-205ENST00000519386 SERHL2Q9H4I8 314 aa6.76□□□□□ -1.33
MRPS28-205ENST00000519386 ZNF768Q9H5H4 540 aaKnown RBP6.76□□□□□ -1.33
MRPS28-205ENST00000519386 TRIM45Q9H8W5 580 aaPredicted RBP6.76□□□□□ -1.33
MRPS28-205ENST00000519386 POLR1BQ9H9Y6 1135 aa6.76□□□□□ -1.33
MRPS28-205ENST00000519386 PDE7BQ9NP56 450 aa6.76□□□□□ -1.33
MRPS28-205ENST00000519386 POLE3Q9NRF9 147 aa6.76□□□□□ -1.33
MRPS28-205ENST00000519386 DDX18Q9NVP1 670 aaKnown RBP6.76□□□□□ -1.33
MRPS28-205ENST00000519386 OCIAD1Q9NX40 245 aa6.76□□□□□ -1.33
MRPS28-205ENST00000519386 SIDT1Q9NXL6 827 aaKnown RBP6.76□□□□□ -1.33
MRPS28-205ENST00000519386 TUBA8Q9NY65 449 aaPredicted RBP6.76□□□□□ -1.33
MRPS28-205ENST00000519386 AKAP7Q9P0M2 348 aaPredicted RBP6.76□□□□□ -1.33
MRPS28-205ENST00000519386 C5AR2Q9P296 337 aa6.76□□□□□ -1.33
MRPS28-205ENST00000519386 PISDQ9UG56 409 aa6.76□□□□□ -1.33
MRPS28-205ENST00000519386 KCND3Q9UK17 655 aa6.76□□□□□ -1.33
MRPS28-205ENST00000519386 FBXW2Q9UKT8 454 aa6.76□□□□□ -1.33
MRPS28-205ENST00000519386 ABCG2Q9UNQ0 655 aa6.76□□□□□ -1.33
MRPS28-205ENST00000519386 NAALAD2Q9Y3Q0 740 aa6.76□□□□□ -1.33
MRPS28-205ENST00000519386 GPC6Q9Y625 555 aaPredicted RBP6.76□□□□□ -1.33
MRPS28-205ENST00000519386 HSPE1-MOB4S4R3N1 261 aa6.76□□□□□ -1.33
MRPS28-205ENST00000519386 SDK2Q58EX2 2172 aa6.75□□□□□ -1.33
MRPS28-205ENST00000519386 A6NHS1 94 aa6.75□□□□□ -1.33
MRPS28-205ENST00000519386 SLC9B1P1A6NJY1 282 aa6.75□□□□□ -1.33
MRPS28-205ENST00000519386 PDLIM1O00151 329 aa6.75□□□□□ -1.33
MRPS28-205ENST00000519386 SLC16A6O15403 523 aa6.75□□□□□ -1.33
MRPS28-205ENST00000519386 BRINP1O60477 761 aa6.75□□□□□ -1.33
MRPS28-205ENST00000519386 PRAMEF10O60809 474 aa6.75□□□□□ -1.33
MRPS28-205ENST00000519386 B4GALT2O60909 372 aa6.75□□□□□ -1.33
MRPS28-205ENST00000519386 COQ9O75208 318 aa6.75□□□□□ -1.33
MRPS28-205ENST00000519386 JRKO75564 520 aa6.75□□□□□ -1.33
MRPS28-205ENST00000519386 SMNDC1O75940 238 aaKnown RBP eCLIP6.75□□□□□ -1.33
MRPS28-205ENST00000519386 MFN2O95140 757 aa6.75□□□□□ -1.33
MRPS28-205ENST00000519386 H6PDO95479 791 aa6.75□□□□□ -1.33
MRPS28-205ENST00000519386 GPR75O95800 540 aa6.75□□□□□ -1.33
MRPS28-205ENST00000519386 C1QCP02747 245 aa6.75□□□□□ -1.33
MRPS28-205ENST00000519386 HMGN2P05204 90 aaKnown RBP6.75□□□□□ -1.33
MRPS28-205ENST00000519386 BCHEP06276 602 aa6.75□□□□□ -1.33
MRPS28-205ENST00000519386 JMJD7P0C870 316 aa6.75□□□□□ -1.33
MRPS28-205ENST00000519386 FOLR1P15328 257 aa6.75□□□□□ -1.33
MRPS28-205ENST00000519386 PORP16435 677 aaPredicted RBP6.75□□□□□ -1.33
MRPS28-205ENST00000519386 RHCEP18577 417 aa6.75□□□□□ -1.33
MRPS28-205ENST00000519386 NELFEP18615 380 aaKnown RBP6.75□□□□□ -1.33
MRPS28-205ENST00000519386 CD247P20963 164 aa6.75□□□□□ -1.33
MRPS28-205ENST00000519386 MATN1P21941 496 aa6.75□□□□□ -1.33
MRPS28-205ENST00000519386 IGFBP5P24593 272 aa6.75□□□□□ -1.33
MRPS28-205ENST00000519386 XCR1P46094 333 aa6.75□□□□□ -1.33
MRPS28-205ENST00000519386 MAN2A2P49641 1150 aa6.75□□□□□ -1.33
MRPS28-205ENST00000519386 HMGA2P52926 109 aa6.75□□□□□ -1.33
MRPS28-205ENST00000519386 VSX2P58304 361 aaPredicted RBP6.75□□□□□ -1.33
MRPS28-205ENST00000519386 SMIM11AP58511 58 aa6.75□□□□□ -1.33
MRPS28-205ENST00000519386 TUBA4AP68366 448 aa6.75□□□□□ -1.33
MRPS28-205ENST00000519386 HSD11B2P80365 405 aa6.75□□□□□ -1.33
MRPS28-205ENST00000519386 EIF3IQ13347 325 aaKnown RBP6.75□□□□□ -1.33
MRPS28-205ENST00000519386 APOFQ13790 326 aa6.75□□□□□ -1.33
MRPS28-205ENST00000519386 RUNX2Q13950 521 aa6.75□□□□□ -1.33
MRPS28-205ENST00000519386 KEAP1Q14145 624 aa6.75□□□□□ -1.33
MRPS28-205ENST00000519386 GRM7Q14831 915 aa6.75□□□□□ -1.33
MRPS28-205ENST00000519386 RTP5Q14D33 572 aa6.75□□□□□ -1.33
MRPS28-205ENST00000519386 FAM214AQ32MH5 1076 aa6.75□□□□□ -1.33
MRPS28-205ENST00000519386 ZNF628Q5EBL2 1059 aa6.75□□□□□ -1.33
MRPS28-205ENST00000519386 ATAD3BQ5T9A4 648 aa6.75□□□□□ -1.33
MRPS28-205ENST00000519386 KDM4DQ6B0I6 523 aa6.75□□□□□ -1.33
MRPS28-205ENST00000519386 HEPHL1Q6MZM0 1159 aa6.75□□□□□ -1.33
MRPS28-205ENST00000519386 MFSD12Q6NUT3 480 aa6.75□□□□□ -1.33
MRPS28-205ENST00000519386 CDC73Q6P1J9 531 aa6.75□□□□□ -1.33
MRPS28-205ENST00000519386 FAHD1Q6P587 224 aa6.75□□□□□ -1.33
MRPS28-205ENST00000519386 TNFAIP8L2Q6P589 184 aaPredicted RBP6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms