RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 NR4A2P43354 598 aa14.25□□□□□ -0.13
SCAMP4-202ENST00000409472 STXBP1P61764 594 aaKnown RBP14.25□□□□□ -0.13
SCAMP4-202ENST00000409472 TBCEQ15813 527 aaPredicted RBP14.25□□□□□ -0.13
SCAMP4-202ENST00000409472 LRIT3Q3SXY7 679 aa14.25□□□□□ -0.13
SCAMP4-202ENST00000409472 SNX29P2Q8IUI4 249 aa14.25□□□□□ -0.13
SCAMP4-202ENST00000409472 GRAMD2AQ8IUY3 354 aa14.25□□□□□ -0.13
SCAMP4-202ENST00000409472 NUP43Q8NFH3 380 aa14.25□□□□□ -0.13
SCAMP4-202ENST00000409472 ASB12Q8WXK4 309 aa14.25□□□□□ -0.13
SCAMP4-202ENST00000409472 GAL3ST3Q96A11 431 aa14.25□□□□□ -0.13
SCAMP4-202ENST00000409472 COL26A1Q96A83 441 aa14.25□□□□□ -0.13
SCAMP4-202ENST00000409472 GDF15Q99988 308 aa14.25□□□□□ -0.13
SCAMP4-202ENST00000409472 UCK2Q9BZX2 261 aa14.25□□□□□ -0.13
SCAMP4-202ENST00000409472 SLC38A1Q9H2H9 487 aa14.25□□□□□ -0.13
SCAMP4-202ENST00000409472 ZBTB20Q9HC78 741 aaPredicted RBP14.25□□□□□ -0.13
SCAMP4-202ENST00000409472 DNAJC27Q9NZQ0 273 aa14.25□□□□□ -0.13
SCAMP4-202ENST00000409472 TMCC3Q9ULS5 477 aa14.25□□□□□ -0.13
SCAMP4-202ENST00000409472 NTNG1Q9Y2I2 539 aa14.25□□□□□ -0.13
SCAMP4-202ENST00000409472 FCMRO60667 390 aa14.24□□□□□ -0.13
SCAMP4-202ENST00000409472 ICMTO60725 284 aa14.24□□□□□ -0.13
SCAMP4-202ENST00000409472 UGT2B17O75795 530 aa14.24□□□□□ -0.13
SCAMP4-202ENST00000409472 ADAP00813 363 aa14.24□□□□□ -0.13
SCAMP4-202ENST00000409472 IGHV4-34P06331 123 aa14.24□□□□□ -0.13
SCAMP4-202ENST00000409472 PTNP21246 168 aa14.24□□□□□ -0.13
SCAMP4-202ENST00000409472 IFNA8P32881 189 aa14.24□□□□□ -0.13
SCAMP4-202ENST00000409472 TARDBPQ13148 414 aaKnown RBP eCLIP14.24□□□□□ -0.13
SCAMP4-202ENST00000409472 RUNX2Q13950 521 aa14.24□□□□□ -0.13
SCAMP4-202ENST00000409472 MLIPQ5VWP3 458 aa14.24□□□□□ -0.13
SCAMP4-202ENST00000409472 SLC22A16Q86VW1 577 aa14.24□□□□□ -0.13
SCAMP4-202ENST00000409472 SFXN5Q8TD22 340 aa14.24□□□□□ -0.13
SCAMP4-202ENST00000409472 ITPAQ9BY32 194 aa14.24□□□□□ -0.13
SCAMP4-202ENST00000409472 ZSCAN32Q9NX65 697 aa14.24□□□□□ -0.13
SCAMP4-202ENST00000409472 KCMF1Q9P0J7 381 aa14.24□□□□□ -0.13
SCAMP4-202ENST00000409472 CENPVL1A0A0U1RR11 272 aa14.24□□□□□ -0.13
SCAMP4-202ENST00000409472 CLDN24A6NM45 220 aa14.24□□□□□ -0.13
SCAMP4-202ENST00000409472 H3BN98 237 aa14.24□□□□□ -0.13
SCAMP4-202ENST00000409472 TAF4O00268 1085 aa14.24□□□□□ -0.13
SCAMP4-202ENST00000409472 SNPHO15079 494 aa14.24□□□□□ -0.13
SCAMP4-202ENST00000409472 ENTPD6O75354 484 aa14.24□□□□□ -0.13
SCAMP4-202ENST00000409472 APBB3O95704 486 aa14.24□□□□□ -0.13
SCAMP4-202ENST00000409472 CTSBP07858 339 aa14.24□□□□□ -0.13
SCAMP4-202ENST00000409472 GADD45AP24522 165 aa14.24□□□□□ -0.13
SCAMP4-202ENST00000409472 RNF144AP50876 292 aaPredicted RBP14.24□□□□□ -0.13
SCAMP4-202ENST00000409472 CDC42P60953 191 aa14.24□□□□□ -0.13
SCAMP4-202ENST00000409472 RPS15AP62244 130 aaKnown RBP14.24□□□□□ -0.13
SCAMP4-202ENST00000409472 CCINQ13939 588 aa14.24□□□□□ -0.13
SCAMP4-202ENST00000409472 SUZ12Q15022 739 aaKnown RBP14.24□□□□□ -0.13
SCAMP4-202ENST00000409472 CEBPEQ15744 281 aa14.24□□□□□ -0.13
SCAMP4-202ENST00000409472 TIGD6Q17RP2 521 aa14.24□□□□□ -0.13
SCAMP4-202ENST00000409472 PTCHD4Q6ZW05 846 aa14.24□□□□□ -0.13
SCAMP4-202ENST00000409472 ZNF438Q7Z4V0 828 aa14.24□□□□□ -0.13
SCAMP4-202ENST00000409472 IQCHQ86VS3 1027 aa14.24□□□□□ -0.13
SCAMP4-202ENST00000409472 DEPDC4Q8N2C3 294 aa14.24□□□□□ -0.13
SCAMP4-202ENST00000409472 SLC44A3Q8N4M1 653 aa14.24□□□□□ -0.13
SCAMP4-202ENST00000409472 SLC16A11Q8NCK7 471 aa14.24□□□□□ -0.13
SCAMP4-202ENST00000409472 BBS10Q8TAM1 723 aa14.24□□□□□ -0.13
SCAMP4-202ENST00000409472 DYNC2LI1Q8TCX1 351 aa14.24□□□□□ -0.13
SCAMP4-202ENST00000409472 TRIM63Q969Q1 353 aa14.24□□□□□ -0.13
SCAMP4-202ENST00000409472 SLC6A18Q96N87 628 aa14.24□□□□□ -0.13
SCAMP4-202ENST00000409472 OR5M11Q96RB7 305 aa14.24□□□□□ -0.13
SCAMP4-202ENST00000409472 ACTR10Q9NZ32 417 aa14.24□□□□□ -0.13
SCAMP4-202ENST00000409472 FAAHO00519 579 aa14.23□□□□□ -0.13
SCAMP4-202ENST00000409472 NADKO95544 446 aaPredicted RBP14.23□□□□□ -0.13
SCAMP4-202ENST00000409472 SEMA4FO95754 770 aa14.23□□□□□ -0.13
SCAMP4-202ENST00000409472 KRT8P05787 483 aa14.23□□□□□ -0.13
SCAMP4-202ENST00000409472 OSMP13725 252 aa14.23□□□□□ -0.13
SCAMP4-202ENST00000409472 PRKCAP17252 672 aa14.23□□□□□ -0.13
SCAMP4-202ENST00000409472 MMP11P24347 488 aa14.23□□□□□ -0.13
SCAMP4-202ENST00000409472 SERPINB10P48595 397 aa14.23□□□□□ -0.13
SCAMP4-202ENST00000409472 PDX1P52945 283 aa14.23□□□□□ -0.13
SCAMP4-202ENST00000409472 COPZ1P61923 177 aa14.23□□□□□ -0.13
SCAMP4-202ENST00000409472 MRPS21P82921 87 aaKnown RBP14.23□□□□□ -0.13
SCAMP4-202ENST00000409472 PRR23CQ6ZRP0 262 aa14.23□□□□□ -0.13
SCAMP4-202ENST00000409472 ZER1Q7Z7L7 766 aa14.23□□□□□ -0.13
SCAMP4-202ENST00000409472 KRT73Q86Y46 540 aa14.23□□□□□ -0.13
SCAMP4-202ENST00000409472 STX19Q8N4C7 294 aa14.23□□□□□ -0.13
SCAMP4-202ENST00000409472 ASCC1Q8N9N2 400 aaKnown RBP14.23□□□□□ -0.13
SCAMP4-202ENST00000409472 TMEM52Q8NDY8 209 aa14.23□□□□□ -0.13
SCAMP4-202ENST00000409472 OR5T3Q8NGG3 340 aa14.23□□□□□ -0.13
SCAMP4-202ENST00000409472 OR56A1Q8NGH5 318 aa14.23□□□□□ -0.13
SCAMP4-202ENST00000409472 ZNF675Q8TD23 568 aa14.23□□□□□ -0.13
SCAMP4-202ENST00000409472 FAM3CQ92520 227 aa14.23□□□□□ -0.13
SCAMP4-202ENST00000409472 BCL2L10Q9HD36 194 aa14.23□□□□□ -0.13
SCAMP4-202ENST00000409472 TLR4O00206 839 aa14.23□□□□□ -0.13
SCAMP4-202ENST00000409472 EMC8O43402 210 aa14.23□□□□□ -0.13
SCAMP4-202ENST00000409472 LGI1O95970 557 aa14.23□□□□□ -0.13
SCAMP4-202ENST00000409472 SLC35G6P0C7Q6 338 aa14.23□□□□□ -0.13
SCAMP4-202ENST00000409472 TNNI3P19429 210 aa14.23□□□□□ -0.13
SCAMP4-202ENST00000409472 NKX2-5P52952 324 aaPredicted RBP14.23□□□□□ -0.13
SCAMP4-202ENST00000409472 UGT2B15P54855 530 aa14.23□□□□□ -0.13
SCAMP4-202ENST00000409472 TNFRSF17Q02223 184 aa14.23□□□□□ -0.13
SCAMP4-202ENST00000409472 ESX1Q8N693 406 aa14.23□□□□□ -0.13
SCAMP4-202ENST00000409472 MORN4Q8NDC4 146 aa14.23□□□□□ -0.13
SCAMP4-202ENST00000409472 OR4K5Q8NGD3 323 aa14.23□□□□□ -0.13
SCAMP4-202ENST00000409472 NT5CQ8TCD5 201 aa14.23□□□□□ -0.13
SCAMP4-202ENST00000409472 MYDGFQ969H8 173 aa14.23□□□□□ -0.13
SCAMP4-202ENST00000409472 LGALS12Q96DT0 336 aa14.23□□□□□ -0.13
SCAMP4-202ENST00000409472 TM4SF19Q96DZ7 209 aa14.23□□□□□ -0.13
SCAMP4-202ENST00000409472 STARD5Q9NSY2 213 aa14.23□□□□□ -0.13
SCAMP4-202ENST00000409472 PILRAQ9UKJ1 303 aa14.23□□□□□ -0.13
SCAMP4-202ENST00000409472 NDRG2Q9UN36 371 aaKnown RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms