RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 TGIF2Q9GZN2 237 aa16.47■□□□□ 0.23
SHKBP1-224ENST00000600718 RUBCNLQ9H714 662 aa16.47■□□□□ 0.23
SHKBP1-224ENST00000600718 DUSP22Q9NRW4 184 aa16.47■□□□□ 0.23
SHKBP1-224ENST00000600718 hCG_2039718K7EN88 272 aa16.46■□□□□ 0.23
SHKBP1-224ENST00000600718 AGRPO00253 132 aa16.46■□□□□ 0.23
SHKBP1-224ENST00000600718 DPM1O60762 260 aa16.46■□□□□ 0.23
SHKBP1-224ENST00000600718 NME6O75414 186 aaPredicted RBP16.46■□□□□ 0.23
SHKBP1-224ENST00000600718 H6PDO95479 791 aa16.46■□□□□ 0.23
SHKBP1-224ENST00000600718 ONECUT2O95948 504 aa16.46■□□□□ 0.23
SHKBP1-224ENST00000600718 ATXN8OSP0DMR3 200 aa16.46■□□□□ 0.23
SHKBP1-224ENST00000600718 ZNF23P17027 643 aa16.46■□□□□ 0.23
SHKBP1-224ENST00000600718 CD247P20963 164 aa16.46■□□□□ 0.23
SHKBP1-224ENST00000600718 SPEM2Q0P670 501 aa16.46■□□□□ 0.23
SHKBP1-224ENST00000600718 DYNC1I2Q13409 638 aaKnown RBP16.46■□□□□ 0.23
SHKBP1-224ENST00000600718 DUSP5Q16690 384 aa16.46■□□□□ 0.23
SHKBP1-224ENST00000600718 ARHGAP11BQ3KRB8 267 aa16.46■□□□□ 0.23
SHKBP1-224ENST00000600718 MFSD4BQ5TF39 518 aa16.46■□□□□ 0.23
SHKBP1-224ENST00000600718 OR2T5Q6IEZ7 315 aa16.46■□□□□ 0.23
SHKBP1-224ENST00000600718 WDR53Q7Z5U6 358 aaPredicted RBP16.46■□□□□ 0.23
SHKBP1-224ENST00000600718 SVOPLQ8N434 492 aa16.46■□□□□ 0.23
SHKBP1-224ENST00000600718 CBR4Q8N4T8 237 aa16.46■□□□□ 0.23
SHKBP1-224ENST00000600718 OR2T29Q8NH02 315 aa16.46■□□□□ 0.23
SHKBP1-224ENST00000600718 CDS1Q92903 461 aa16.46■□□□□ 0.23
SHKBP1-224ENST00000600718 PRRX2Q99811 253 aa16.46■□□□□ 0.23
SHKBP1-224ENST00000600718 SEC14L3Q9UDX4 400 aa16.46■□□□□ 0.23
SHKBP1-224ENST00000600718 ABCG2Q9UNQ0 655 aa16.46■□□□□ 0.23
SHKBP1-224ENST00000600718 IGKV3D-11A0A0A0MRZ8 115 aa16.46■□□□□ 0.22
SHKBP1-224ENST00000600718 SYNDIG1LA6NDD5 238 aa16.46■□□□□ 0.22
SHKBP1-224ENST00000600718 PDLIM1O00151 329 aa16.46■□□□□ 0.22
SHKBP1-224ENST00000600718 SOCS2O14508 198 aa16.46■□□□□ 0.22
SHKBP1-224ENST00000600718 RASAL1O95294 804 aa16.46■□□□□ 0.22
SHKBP1-224ENST00000600718 TIAF1O95411 115 aa16.46■□□□□ 0.22
SHKBP1-224ENST00000600718 ITGA2P17301 1181 aa16.46■□□□□ 0.22
SHKBP1-224ENST00000600718 TNNI3P19429 210 aa16.46■□□□□ 0.22
SHKBP1-224ENST00000600718 MAP3K8P41279 467 aa16.46■□□□□ 0.22
SHKBP1-224ENST00000600718 KCNJ5P48544 419 aa16.46■□□□□ 0.22
SHKBP1-224ENST00000600718 DCDP81605 110 aaKnown RBP16.46■□□□□ 0.22
SHKBP1-224ENST00000600718 RHAGQ02094 409 aa16.46■□□□□ 0.22
SHKBP1-224ENST00000600718 ZNF267Q14586 743 aaPredicted RBP16.46■□□□□ 0.22
SHKBP1-224ENST00000600718 DUSP7Q16829 419 aa16.46■□□□□ 0.22
SHKBP1-224ENST00000600718 MINDY4Q4G0A6 757 aa16.46■□□□□ 0.22
SHKBP1-224ENST00000600718 IQCCQ4KMZ1 466 aa16.46■□□□□ 0.22
SHKBP1-224ENST00000600718 VWA2Q5GFL6 755 aa16.46■□□□□ 0.22
SHKBP1-224ENST00000600718 ZDHHC13Q8IUH4 622 aa16.46■□□□□ 0.22
SHKBP1-224ENST00000600718 HOXB13Q92826 284 aaPredicted RBP16.46■□□□□ 0.22
SHKBP1-224ENST00000600718 ZNF597Q96LX8 424 aa16.46■□□□□ 0.22
SHKBP1-224ENST00000600718 CDC6Q99741 560 aa16.46■□□□□ 0.22
SHKBP1-224ENST00000600718 THSD1Q9NS62 852 aa16.46■□□□□ 0.22
SHKBP1-224ENST00000600718 SEMA4GQ9NTN9 838 aa16.46■□□□□ 0.22
SHKBP1-224ENST00000600718 A8MVJ9 347 aa16.45■□□□□ 0.22
SHKBP1-224ENST00000600718 CBFA2T3O75081 653 aa16.45■□□□□ 0.22
SHKBP1-224ENST00000600718 CCKBRP32239 447 aa16.45■□□□□ 0.22
SHKBP1-224ENST00000600718 RORAP35398 523 aa16.45■□□□□ 0.22
SHKBP1-224ENST00000600718 E2F1Q01094 437 aa16.45■□□□□ 0.22
SHKBP1-224ENST00000600718 MC2RQ01718 297 aa16.45■□□□□ 0.22
SHKBP1-224ENST00000600718 FUT7Q11130 342 aa16.45■□□□□ 0.22
SHKBP1-224ENST00000600718 NRF1Q16656 503 aa16.45■□□□□ 0.22
SHKBP1-224ENST00000600718 NKAIN1Q4KMZ8 207 aa16.45■□□□□ 0.22
SHKBP1-224ENST00000600718 RBM44Q6ZP01 1051 aaKnown RBP16.45■□□□□ 0.22
SHKBP1-224ENST00000600718 COX15Q7KZN9 410 aa16.45■□□□□ 0.22
SHKBP1-224ENST00000600718 BMPERQ8N8U9 685 aa16.45■□□□□ 0.22
SHKBP1-224ENST00000600718 SLC38A9Q8NBW4 561 aa16.45■□□□□ 0.22
SHKBP1-224ENST00000600718 CHDHQ8NE62 594 aaPredicted RBP16.45■□□□□ 0.22
SHKBP1-224ENST00000600718 OR5K1Q8NHB7 308 aa16.45■□□□□ 0.22
SHKBP1-224ENST00000600718 PROX1Q92786 737 aa16.45■□□□□ 0.22
SHKBP1-224ENST00000600718 ZNF347Q96SE7 839 aa16.45■□□□□ 0.22
SHKBP1-224ENST00000600718 SLC38A1Q9H2H9 487 aa16.45■□□□□ 0.22
SHKBP1-224ENST00000600718 APMAPQ9HDC9 416 aa16.45■□□□□ 0.22
SHKBP1-224ENST00000600718 FBXO8Q9NRD0 319 aa16.45■□□□□ 0.22
SHKBP1-224ENST00000600718 SLC22A11Q9NSA0 550 aa16.45■□□□□ 0.22
SHKBP1-224ENST00000600718 RXFP3Q9NSD7 469 aa16.45■□□□□ 0.22
SHKBP1-224ENST00000600718 SATB2Q9UPW6 733 aa16.45■□□□□ 0.22
SHKBP1-224ENST00000600718 SPTBP11277 2137 aa16.45■□□□□ 0.22
SHKBP1-224ENST00000600718 IGLV3-12A0A075B6K2 115 aa16.44■□□□□ 0.22
SHKBP1-224ENST00000600718 G3V2T6 193 aa16.44■□□□□ 0.22
SHKBP1-224ENST00000600718 POLR1CO15160 346 aaPredicted RBP16.44■□□□□ 0.22
SHKBP1-224ENST00000600718 AK1P00568 194 aa16.44■□□□□ 0.22
SHKBP1-224ENST00000600718 UQCRBP14927 111 aa16.44■□□□□ 0.22
SHKBP1-224ENST00000600718 HPCAP84074 193 aa16.44■□□□□ 0.22
SHKBP1-224ENST00000600718 KCNC4Q03721 635 aa16.44■□□□□ 0.22
SHKBP1-224ENST00000600718 DUSP8Q13202 625 aa16.44■□□□□ 0.22
SHKBP1-224ENST00000600718 ILKQ13418 452 aa16.44■□□□□ 0.22
SHKBP1-224ENST00000600718 CSRP2Q16527 193 aa16.44■□□□□ 0.22
SHKBP1-224ENST00000600718 FOXB2Q5VYV0 432 aa16.44■□□□□ 0.22
SHKBP1-224ENST00000600718 PLPP5Q8NEB5 264 aa16.44■□□□□ 0.22
SHKBP1-224ENST00000600718 OR7G1Q8NGA0 311 aa16.44■□□□□ 0.22
SHKBP1-224ENST00000600718 SDCCAG3Q96C92 435 aa16.44■□□□□ 0.22
SHKBP1-224ENST00000600718 LMF2Q9BU23 707 aaKnown RBP16.44■□□□□ 0.22
SHKBP1-224ENST00000600718 MTHFD2LQ9H903 347 aaPredicted RBP16.44■□□□□ 0.22
SHKBP1-224ENST00000600718 NDUFAF4Q9P032 175 aa16.44■□□□□ 0.22
SHKBP1-224ENST00000600718 AKAP7Q9P0M2 348 aaPredicted RBP16.44■□□□□ 0.22
SHKBP1-224ENST00000600718 SH3GLB1Q9Y371 365 aa16.44■□□□□ 0.22
SHKBP1-224ENST00000600718 AK5Q9Y6K8 562 aa16.44■□□□□ 0.22
SHKBP1-224ENST00000600718 SCN2AQ99250 2005 aa16.44■□□□□ 0.22
SHKBP1-224ENST00000600718 DSPPQ9NZW4 1301 aa16.44■□□□□ 0.22
SHKBP1-224ENST00000600718 DYRK3O43781 588 aa16.44■□□□□ 0.22
SHKBP1-224ENST00000600718 PRAMEF2O60811 474 aa16.44■□□□□ 0.22
SHKBP1-224ENST00000600718 LRP3O75074 770 aa16.44■□□□□ 0.22
SHKBP1-224ENST00000600718 NKX2-2O95096 273 aa16.44■□□□□ 0.22
SHKBP1-224ENST00000600718 OR1E2P47887 323 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms