RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 GATMP50440 423 aa16.59■□□□□ 0.25
RAB40C-205ENST00000539661 TBPL1P62380 186 aa16.59■□□□□ 0.25
RAB40C-205ENST00000539661 LMAN2Q12907 356 aa16.59■□□□□ 0.25
RAB40C-205ENST00000539661 SUZ12Q15022 739 aaKnown RBP16.59■□□□□ 0.25
RAB40C-205ENST00000539661 DBF4BQ8NFT6 615 aa16.59■□□□□ 0.25
RAB40C-205ENST00000539661 SAP130Q9H0E3 1048 aa16.59■□□□□ 0.25
RAB40C-205ENST00000539661 UBQLN2Q9UHD9 624 aa16.59■□□□□ 0.25
RAB40C-205ENST00000539661 ANAPC1Q9H1A4 1944 aa16.59■□□□□ 0.25
RAB40C-205ENST00000539661 OR2AG2A6NM03 316 aa16.59■□□□□ 0.25
RAB40C-205ENST00000539661 GTPBP1O00178 669 aaKnown RBP16.59■□□□□ 0.25
RAB40C-205ENST00000539661 HMGN4O00479 90 aa16.59■□□□□ 0.25
RAB40C-205ENST00000539661 SCO1O75880 301 aa16.59■□□□□ 0.25
RAB40C-205ENST00000539661 PAHP00439 452 aa16.59■□□□□ 0.25
RAB40C-205ENST00000539661 BTCP35070 178 aa16.59■□□□□ 0.25
RAB40C-205ENST00000539661 CD79BP40259 229 aa16.59■□□□□ 0.25
RAB40C-205ENST00000539661 SLC6A11P48066 632 aa16.59■□□□□ 0.25
RAB40C-205ENST00000539661 ZNF155Q12901 538 aaPredicted RBP16.59■□□□□ 0.25
RAB40C-205ENST00000539661 PLD1Q13393 1074 aa16.59■□□□□ 0.25
RAB40C-205ENST00000539661 TAF12Q16514 161 aa16.59■□□□□ 0.25
RAB40C-205ENST00000539661 IER5LQ5T953 404 aa16.59■□□□□ 0.25
RAB40C-205ENST00000539661 PXDC1Q5TGL8 231 aa16.59■□□□□ 0.25
RAB40C-205ENST00000539661 HBMQ6B0K9 141 aa16.59■□□□□ 0.25
RAB40C-205ENST00000539661 FAAH2Q6GMR7 532 aa16.59■□□□□ 0.25
RAB40C-205ENST00000539661 TAS1R1Q7RTX1 841 aa16.59■□□□□ 0.25
RAB40C-205ENST00000539661 C6orf120Q7Z4R8 191 aa16.59■□□□□ 0.25
RAB40C-205ENST00000539661 KCTD20Q7Z5Y7 419 aa16.59■□□□□ 0.25
RAB40C-205ENST00000539661 LHFPL5Q8TAF8 219 aa16.59■□□□□ 0.25
RAB40C-205ENST00000539661 ZNF480Q8WV37 535 aa16.59■□□□□ 0.25
RAB40C-205ENST00000539661 UBE2E3Q969T4 207 aa16.59■□□□□ 0.25
RAB40C-205ENST00000539661 OR51J1Q9H342 316 aa16.59■□□□□ 0.25
RAB40C-205ENST00000539661 MAN2C1Q9NTJ4 1040 aa16.59■□□□□ 0.25
RAB40C-205ENST00000539661 SLC9A8Q9Y2E8 581 aa16.59■□□□□ 0.25
RAB40C-205ENST00000539661 FKBP7Q9Y680 259 aa16.59■□□□□ 0.25
RAB40C-205ENST00000539661 UBXN7O94888 489 aa16.58■□□□□ 0.25
RAB40C-205ENST00000539661 ZNF250P15622 560 aa16.58■□□□□ 0.25
RAB40C-205ENST00000539661 CELP19835 753 aa16.58■□□□□ 0.25
RAB40C-205ENST00000539661 DDCP20711 480 aa16.58■□□□□ 0.25
RAB40C-205ENST00000539661 NTRK2Q16620 822 aa16.58■□□□□ 0.25
RAB40C-205ENST00000539661 LHFPL3Q86UP9 236 aa16.58■□□□□ 0.25
RAB40C-205ENST00000539661 ADGRG3Q86Y34 549 aa16.58■□□□□ 0.25
RAB40C-205ENST00000539661 OR11H4Q8NGC9 324 aa16.58■□□□□ 0.25
RAB40C-205ENST00000539661 PRRC1Q96M27 445 aa16.58■□□□□ 0.25
RAB40C-205ENST00000539661 GPA33Q99795 319 aa16.58■□□□□ 0.25
RAB40C-205ENST00000539661 WFDC6Q9BQY6 131 aa16.58■□□□□ 0.25
RAB40C-205ENST00000539661 SGPP1Q9BX95 441 aa16.58■□□□□ 0.25
RAB40C-205ENST00000539661 KCNN2Q9H2S1 579 aa16.58■□□□□ 0.25
RAB40C-205ENST00000539661 ENAMQ9NRM1 1142 aa16.58■□□□□ 0.25
RAB40C-205ENST00000539661 IMP3Q9NV31 184 aaKnown RBP16.58■□□□□ 0.25
RAB40C-205ENST00000539661 COPZ2Q9P299 210 aa16.58■□□□□ 0.25
RAB40C-205ENST00000539661 FAM8A1Q9UBU6 413 aa16.58■□□□□ 0.25
RAB40C-205ENST00000539661 TUBAL3A6NHL2 446 aa16.58■□□□□ 0.24
RAB40C-205ENST00000539661 TSPAN6O43657 245 aa16.58■□□□□ 0.24
RAB40C-205ENST00000539661 ATG13O75143 517 aa16.58■□□□□ 0.24
RAB40C-205ENST00000539661 NFATC1O95644 943 aa16.58■□□□□ 0.24
RAB40C-205ENST00000539661 RRASP10301 218 aa16.58■□□□□ 0.24
RAB40C-205ENST00000539661 PEPDP12955 493 aa16.58■□□□□ 0.24
RAB40C-205ENST00000539661 PREPP48147 710 aa16.58■□□□□ 0.24
RAB40C-205ENST00000539661 PITPNBP48739 271 aa16.58■□□□□ 0.24
RAB40C-205ENST00000539661 MANFP55145 182 aaKnown RBP16.58■□□□□ 0.24
RAB40C-205ENST00000539661 BDH1Q02338 343 aa16.58■□□□□ 0.24
RAB40C-205ENST00000539661 FAM83HQ6ZRV2 1179 aaPredicted RBP16.58■□□□□ 0.24
RAB40C-205ENST00000539661 RAB8BQ92930 207 aa16.58■□□□□ 0.24
RAB40C-205ENST00000539661 FOXJ1Q92949 421 aa16.58■□□□□ 0.24
RAB40C-205ENST00000539661 MSANTD3Q96H12 275 aa16.58■□□□□ 0.24
RAB40C-205ENST00000539661 ZSWIM3Q96MP5 696 aa16.58■□□□□ 0.24
RAB40C-205ENST00000539661 ZSCAN5AQ9BUG6 496 aa16.58■□□□□ 0.24
RAB40C-205ENST00000539661 JAM3Q9BX67 310 aa16.58■□□□□ 0.24
RAB40C-205ENST00000539661 PLA2G12AQ9BZM1 189 aa16.58■□□□□ 0.24
RAB40C-205ENST00000539661 OSGEPL1Q9H4B0 414 aa16.58■□□□□ 0.24
RAB40C-205ENST00000539661 ELAC1Q9H777 363 aaKnown RBP16.58■□□□□ 0.24
RAB40C-205ENST00000539661 LIN7BQ9HAP6 207 aa16.58■□□□□ 0.24
RAB40C-205ENST00000539661 LIPT1Q9Y234 373 aa16.58■□□□□ 0.24
RAB40C-205ENST00000539661 EXOGQ9Y2C4 368 aaKnown RBP16.58■□□□□ 0.24
RAB40C-205ENST00000539661 CKBP12277 381 aa16.57■□□□□ 0.24
RAB40C-205ENST00000539661 OR1D2P34982 312 aa16.57■□□□□ 0.24
RAB40C-205ENST00000539661 IFNGR2P38484 337 aa16.57■□□□□ 0.24
RAB40C-205ENST00000539661 CDH11P55287 796 aa16.57■□□□□ 0.24
RAB40C-205ENST00000539661 RAG2P55895 527 aa16.57■□□□□ 0.24
RAB40C-205ENST00000539661 POLR2LP62875 67 aaKnown RBP16.57■□□□□ 0.24
RAB40C-205ENST00000539661 HTRA3P83110 453 aa16.57■□□□□ 0.24
RAB40C-205ENST00000539661 EOGTQ5NDL2 527 aa16.57■□□□□ 0.24
RAB40C-205ENST00000539661 MPP7Q5T2T1 576 aa16.57■□□□□ 0.24
RAB40C-205ENST00000539661 ASB18Q6ZVZ8 466 aa16.57■□□□□ 0.24
RAB40C-205ENST00000539661 ADGRD2Q7Z7M1 963 aa16.57■□□□□ 0.24
RAB40C-205ENST00000539661 OAFQ86UD1 273 aa16.57■□□□□ 0.24
RAB40C-205ENST00000539661 TRAM1L1Q8N609 369 aa16.57■□□□□ 0.24
RAB40C-205ENST00000539661 TOR1AIP2Q8NFQ8 470 aa16.57■□□□□ 0.24
RAB40C-205ENST00000539661 GNPDA2Q8TDQ7 276 aa16.57■□□□□ 0.24
RAB40C-205ENST00000539661 CASD1Q96PB1 797 aa16.57■□□□□ 0.24
RAB40C-205ENST00000539661 TREX2Q9BQ50 279 aaPredicted RBP16.57■□□□□ 0.24
RAB40C-205ENST00000539661 AHSPQ9NZD4 102 aa16.57■□□□□ 0.24
RAB40C-205ENST00000539661 P2RX2Q9UBL9 471 aa16.57■□□□□ 0.24
RAB40C-205ENST00000539661 TRIM77I1YAP6 450 aa16.57■□□□□ 0.24
RAB40C-205ENST00000539661 CASC3O15234 703 aaKnown RBP16.57■□□□□ 0.24
RAB40C-205ENST00000539661 SEPT4O43236 478 aa16.57■□□□□ 0.24
RAB40C-205ENST00000539661 HRO43593 1189 aa16.57■□□□□ 0.24
RAB40C-205ENST00000539661 LANCL1O43813 399 aa16.57■□□□□ 0.24
RAB40C-205ENST00000539661 SLC28A2O43868 658 aa16.57■□□□□ 0.24
RAB40C-205ENST00000539661 IGHA1P01876 353 aa16.57■□□□□ 0.24
RAB40C-205ENST00000539661 ENPP1P22413 925 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms