RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 SLC22A10Q63ZE4 541 aa10.89□□□□□ -0.67
RAB5C-204ENST00000547517 TMEM107Q6UX40 140 aa10.89□□□□□ -0.67
RAB5C-204ENST00000547517 GHDCQ8N2G8 530 aa10.89□□□□□ -0.67
RAB5C-204ENST00000547517 FBXW8Q8N3Y1 598 aa10.89□□□□□ -0.67
RAB5C-204ENST00000547517 LIX1Q8N485 282 aa10.89□□□□□ -0.67
RAB5C-204ENST00000547517 FNDC5Q8NAU1 212 aa10.89□□□□□ -0.67
RAB5C-204ENST00000547517 C17orf47Q8NEP4 570 aa10.89□□□□□ -0.67
RAB5C-204ENST00000547517 PAQR8Q8TEZ7 354 aa10.89□□□□□ -0.67
RAB5C-204ENST00000547517 CIDECQ96AQ7 238 aaPredicted RBP10.89□□□□□ -0.67
RAB5C-204ENST00000547517 TLCD1Q96CP7 247 aa10.89□□□□□ -0.67
RAB5C-204ENST00000547517 TUBGCP3Q96CW5 907 aa10.89□□□□□ -0.67
RAB5C-204ENST00000547517 ERP27Q96DN0 273 aa10.89□□□□□ -0.67
RAB5C-204ENST00000547517 SORT1Q99523 831 aa10.89□□□□□ -0.67
RAB5C-204ENST00000547517 TTTY12Q9BZ98 90 aa10.89□□□□□ -0.67
RAB5C-204ENST00000547517 C20orf27Q9GZN8 174 aa10.89□□□□□ -0.67
RAB5C-204ENST00000547517 GLIPR2Q9H4G4 154 aa10.89□□□□□ -0.67
RAB5C-204ENST00000547517 REEP4Q9H6H4 257 aa10.89□□□□□ -0.67
RAB5C-204ENST00000547517 SH2D2AQ9NP31 389 aa10.89□□□□□ -0.67
RAB5C-204ENST00000547517 TUBA8Q9NY65 449 aaPredicted RBP10.89□□□□□ -0.67
RAB5C-204ENST00000547517 NKIRAS1Q9NYS0 192 aa10.89□□□□□ -0.67
RAB5C-204ENST00000547517 RAP2CQ9Y3L5 183 aa10.89□□□□□ -0.67
RAB5C-204ENST00000547517 NPFFR2Q9Y5X5 522 aa10.89□□□□□ -0.67
RAB5C-204ENST00000547517 CHCHD2Q9Y6H1 151 aaPredicted RBP10.89□□□□□ -0.67
RAB5C-204ENST00000547517 TRGV8A0A0C4DH27 118 aa10.88□□□□□ -0.67
RAB5C-204ENST00000547517 FRG2CA6NGY1 282 aa10.88□□□□□ -0.67
RAB5C-204ENST00000547517 ZNHIT1O43257 154 aa10.88□□□□□ -0.67
RAB5C-204ENST00000547517 LRRTM2O43300 516 aa10.88□□□□□ -0.67
RAB5C-204ENST00000547517 ASNA1O43681 348 aa10.88□□□□□ -0.67
RAB5C-204ENST00000547517 SLC19A2O60779 497 aa10.88□□□□□ -0.67
RAB5C-204ENST00000547517 COQ9O75208 318 aa10.88□□□□□ -0.67
RAB5C-204ENST00000547517 BCAS2O75934 225 aaPredicted RBP10.88□□□□□ -0.67
RAB5C-204ENST00000547517 HPCAL1P37235 193 aa10.88□□□□□ -0.67
RAB5C-204ENST00000547517 ASMTP46597 345 aa10.88□□□□□ -0.67
RAB5C-204ENST00000547517 WDR4P57081 412 aaKnown RBP10.88□□□□□ -0.67
RAB5C-204ENST00000547517 BST1Q10588 318 aa10.88□□□□□ -0.67
RAB5C-204ENST00000547517 KRTCAP3Q53RY4 240 aa10.88□□□□□ -0.67
RAB5C-204ENST00000547517 CMPK2Q5EBM0 449 aa10.88□□□□□ -0.67
RAB5C-204ENST00000547517 C6orf136Q5SQH8 315 aa10.88□□□□□ -0.67
RAB5C-204ENST00000547517 FJX1Q86VR8 437 aa10.88□□□□□ -0.67
RAB5C-204ENST00000547517 SLC22A16Q86VW1 577 aa10.88□□□□□ -0.67
RAB5C-204ENST00000547517 OR52N2Q8NGI0 321 aa10.88□□□□□ -0.67
RAB5C-204ENST00000547517 DIO2Q92813 273 aa10.88□□□□□ -0.67
RAB5C-204ENST00000547517 OMA1Q96E52 524 aa10.88□□□□□ -0.67
RAB5C-204ENST00000547517 LCORQ96JN0 433 aaPredicted RBP10.88□□□□□ -0.67
RAB5C-204ENST00000547517 JSRP1Q96MG2 331 aaPredicted RBP10.88□□□□□ -0.67
RAB5C-204ENST00000547517 AMDHD1Q96NU7 426 aa10.88□□□□□ -0.67
RAB5C-204ENST00000547517 FOLH1BQ9HBA9 442 aa10.88□□□□□ -0.67
RAB5C-204ENST00000547517 RYDENQ9NUL5 291 aaKnown RBP10.88□□□□□ -0.67
RAB5C-204ENST00000547517 DDX18Q9NVP1 670 aaKnown RBP10.88□□□□□ -0.67
RAB5C-204ENST00000547517 ARGLU1Q9NWB6 273 aaPredicted RBP10.88□□□□□ -0.67
RAB5C-204ENST00000547517 TAS2R7Q9NYW3 318 aa10.88□□□□□ -0.67
RAB5C-204ENST00000547517 CNIH4Q9P003 139 aa10.88□□□□□ -0.67
RAB5C-204ENST00000547517 SH3BP4Q9P0V3 963 aa10.88□□□□□ -0.67
RAB5C-204ENST00000547517 CNOT11Q9UKZ1 510 aaKnown RBP10.88□□□□□ -0.67
RAB5C-204ENST00000547517 HIVEP3Q5T1R4 2406 aa10.87□□□□□ -0.67
RAB5C-204ENST00000547517 TP53I11O14683 189 aa10.87□□□□□ -0.67
RAB5C-204ENST00000547517 SCAMP2O15127 329 aaKnown RBP10.87□□□□□ -0.67
RAB5C-204ENST00000547517 ACOX3O15254 700 aa10.87□□□□□ -0.67
RAB5C-204ENST00000547517 PLOD3O60568 738 aa10.87□□□□□ -0.67
RAB5C-204ENST00000547517 ERN1O75460 977 aaKnown RBP10.87□□□□□ -0.67
RAB5C-204ENST00000547517 PDE9AO76083 593 aa10.87□□□□□ -0.67
RAB5C-204ENST00000547517 GLSO94925 669 aaPredicted RBP10.87□□□□□ -0.67
RAB5C-204ENST00000547517 SLITRK5O94991 958 aa10.87□□□□□ -0.67
RAB5C-204ENST00000547517 SNUPNO95149 360 aaKnown RBP10.87□□□□□ -0.67
RAB5C-204ENST00000547517 LDLRP01130 860 aa10.87□□□□□ -0.67
RAB5C-204ENST00000547517 ABOP16442 354 aa10.87□□□□□ -0.67
RAB5C-204ENST00000547517 EFNA1P20827 205 aaPredicted RBP10.87□□□□□ -0.67
RAB5C-204ENST00000547517 GPC1P35052 558 aa10.87□□□□□ -0.67
RAB5C-204ENST00000547517 PPICP45877 212 aa10.87□□□□□ -0.67
RAB5C-204ENST00000547517 RPL14P50914 215 aaKnown RBP10.87□□□□□ -0.67
RAB5C-204ENST00000547517 CASP6P55212 293 aa10.87□□□□□ -0.67
RAB5C-204ENST00000547517 CORO7P57737 925 aa10.87□□□□□ -0.67
RAB5C-204ENST00000547517 DCAF7P61962 342 aa10.87□□□□□ -0.67
RAB5C-204ENST00000547517 FOXO1Q12778 655 aa10.87□□□□□ -0.67
RAB5C-204ENST00000547517 PDE7AQ13946 482 aa10.87□□□□□ -0.67
RAB5C-204ENST00000547517 PTGR1Q14914 329 aa10.87□□□□□ -0.67
RAB5C-204ENST00000547517 C3AR1Q16581 482 aa10.87□□□□□ -0.67
RAB5C-204ENST00000547517 IL23RQ5VWK5 629 aa10.87□□□□□ -0.67
RAB5C-204ENST00000547517 BICRALQ6AI39 1079 aa10.87□□□□□ -0.67
RAB5C-204ENST00000547517 NPSR1Q6W5P4 371 aa10.87□□□□□ -0.67
RAB5C-204ENST00000547517 ZNF551Q7Z340 670 aaPredicted RBP10.87□□□□□ -0.67
RAB5C-204ENST00000547517 SZRD1Q7Z422 152 aa10.87□□□□□ -0.67
RAB5C-204ENST00000547517 TMEM251Q8N6I4 163 aa10.87□□□□□ -0.67
RAB5C-204ENST00000547517 ZFP28Q8NHY6 868 aa10.87□□□□□ -0.67
RAB5C-204ENST00000547517 SPPL2AQ8TCT8 520 aa10.87□□□□□ -0.67
RAB5C-204ENST00000547517 ARL8AQ96BM9 186 aa10.87□□□□□ -0.67
RAB5C-204ENST00000547517 HSPBAP1Q96EW2 488 aa10.87□□□□□ -0.67
RAB5C-204ENST00000547517 ZNF764Q96H86 408 aaPredicted RBP10.87□□□□□ -0.67
RAB5C-204ENST00000547517 VSTM2LQ96N03 204 aa10.87□□□□□ -0.67
RAB5C-204ENST00000547517 BTBD9Q96Q07 612 aa10.87□□□□□ -0.67
RAB5C-204ENST00000547517 DOHHQ9BU89 302 aa10.87□□□□□ -0.67
RAB5C-204ENST00000547517 DEFB127Q9H1M4 99 aa10.87□□□□□ -0.67
RAB5C-204ENST00000547517 IL1RL2Q9HB29 575 aa10.87□□□□□ -0.67
RAB5C-204ENST00000547517 TAS2R9Q9NYW1 312 aa10.87□□□□□ -0.67
RAB5C-204ENST00000547517 TINAGQ9UJW2 476 aa10.87□□□□□ -0.67
RAB5C-204ENST00000547517 BOKQ9UMX3 212 aaPredicted RBP10.87□□□□□ -0.67
RAB5C-204ENST00000547517 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.87□□□□□ -0.67
RAB5C-204ENST00000547517 USP9XQ93008 2570 aaPredicted RBP10.87□□□□□ -0.67
RAB5C-204ENST00000547517 CROCCQ5TZA2 2017 aa10.87□□□□□ -0.67
RAB5C-204ENST00000547517 LRRK2Q5S007 2527 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms