RNA–Protein interactions for RNA: ENST00000543710.5

VPS13D-211, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 5,676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-211ENST00000543710 CD9P21926 228 aa7.45□□□□□ -1.22
VPS13D-211ENST00000543710 FBLP22087 321 aaKnown RBP7.45□□□□□ -1.22
VPS13D-211ENST00000543710 RBMXP38159 391 aaKnown RBP7.45□□□□□ -1.22
VPS13D-211ENST00000543710 DAP3P51398 398 aaKnown RBP7.45□□□□□ -1.22
VPS13D-211ENST00000543710 CHRNA6Q15825 494 aa7.45□□□□□ -1.22
VPS13D-211ENST00000543710 EIF2S3LQ2VIR3 472 aaKnown RBP7.45□□□□□ -1.22
VPS13D-211ENST00000543710 GXYLT1Q4G148 440 aa7.45□□□□□ -1.22
VPS13D-211ENST00000543710 SFT2D3Q587I9 215 aa7.45□□□□□ -1.22
VPS13D-211ENST00000543710 OR4F3Q6IEY1 312 aa7.45□□□□□ -1.22
VPS13D-211ENST00000543710 TMEM214Q6NUQ4 689 aaKnown RBP7.45□□□□□ -1.22
VPS13D-211ENST00000543710 NIPAL3Q6P499 406 aa7.45□□□□□ -1.22
VPS13D-211ENST00000543710 SLC2A7Q6PXP3 512 aa7.45□□□□□ -1.22
VPS13D-211ENST00000543710 ENPP6Q6UWR7 440 aa7.45□□□□□ -1.22
VPS13D-211ENST00000543710 LINGO4Q6UY18 593 aa7.45□□□□□ -1.22
VPS13D-211ENST00000543710 KCTD20Q7Z5Y7 419 aa7.45□□□□□ -1.22
VPS13D-211ENST00000543710 SCGB1C1Q8TD33 95 aa7.45□□□□□ -1.22
VPS13D-211ENST00000543710 PHYHIPQ92561 330 aa7.45□□□□□ -1.22
VPS13D-211ENST00000543710 ISL2Q96A47 359 aa7.45□□□□□ -1.22
VPS13D-211ENST00000543710 NECAB3Q96P71 396 aaPredicted RBP7.45□□□□□ -1.22
VPS13D-211ENST00000543710 GAL3ST4Q96RP7 486 aa7.45□□□□□ -1.22
VPS13D-211ENST00000543710 ZNF350Q9GZX5 532 aa7.45□□□□□ -1.22
VPS13D-211ENST00000543710 ANKRD19PQ9H560 264 aa7.45□□□□□ -1.22
VPS13D-211ENST00000543710 EQTNQ9NQ60 294 aa7.45□□□□□ -1.22
VPS13D-211ENST00000543710 KLHL9Q9P2J3 617 aa7.45□□□□□ -1.22
VPS13D-211ENST00000543710 GNG8Q9UK08 70 aa7.45□□□□□ -1.22
VPS13D-211ENST00000543710 PPM1HQ9ULR3 514 aa7.45□□□□□ -1.22
VPS13D-211ENST00000543710 ERVK-19Q9WJR5 959 aa7.45□□□□□ -1.22
VPS13D-211ENST00000543710 TMEM98Q9Y2Y6 226 aa7.45□□□□□ -1.22
VPS13D-211ENST00000543710 GLSO94925 669 aaPredicted RBP7.45□□□□□ -1.22
VPS13D-211ENST00000543710 IFNA17P01571 189 aa7.45□□□□□ -1.22
VPS13D-211ENST00000543710 ZNF43P17038 809 aa7.45□□□□□ -1.22
VPS13D-211ENST00000543710 HSD11B2P80365 405 aa7.45□□□□□ -1.22
VPS13D-211ENST00000543710 DBPQ10586 325 aaPredicted RBP7.45□□□□□ -1.22
VPS13D-211ENST00000543710 RAB40BQ12829 278 aa7.45□□□□□ -1.22
VPS13D-211ENST00000543710 BTBD16Q32M84 506 aa7.45□□□□□ -1.22
VPS13D-211ENST00000543710 CHRFAM7AQ494W8 412 aa7.45□□□□□ -1.22
VPS13D-211ENST00000543710 PRAMEF8Q5VWM4 474 aa7.45□□□□□ -1.22
VPS13D-211ENST00000543710 PRAMEF7Q5VXH5 474 aa7.45□□□□□ -1.22
VPS13D-211ENST00000543710 FBXL22Q6P050 247 aa7.45□□□□□ -1.22
VPS13D-211ENST00000543710 TMPPEQ6ZT21 453 aa7.45□□□□□ -1.22
VPS13D-211ENST00000543710 TTLL10Q6ZVT0 673 aa7.45□□□□□ -1.22
VPS13D-211ENST00000543710 PYROXD2Q8N2H3 581 aa7.45□□□□□ -1.22
VPS13D-211ENST00000543710 OR7D4Q8NG98 312 aa7.45□□□□□ -1.22
VPS13D-211ENST00000543710 MS4A4AQ96JQ5 239 aa7.45□□□□□ -1.22
VPS13D-211ENST00000543710 RBP7Q96R05 134 aa7.45□□□□□ -1.22
VPS13D-211ENST00000543710 SPIN2AQ99865 258 aa7.45□□□□□ -1.22
VPS13D-211ENST00000543710 SPIN2BQ9BPZ2 258 aa7.45□□□□□ -1.22
VPS13D-211ENST00000543710 METTL7AQ9H8H3 244 aa7.45□□□□□ -1.22
VPS13D-211ENST00000543710 RXFP3Q9NSD7 469 aa7.45□□□□□ -1.22
VPS13D-211ENST00000543710 GLTPQ9NZD2 209 aa7.45□□□□□ -1.22
VPS13D-211ENST00000543710 IL37Q9NZH6 218 aa7.45□□□□□ -1.22
VPS13D-211ENST00000543710 COMMD3Q9UBI1 195 aa7.45□□□□□ -1.22
VPS13D-211ENST00000543710 ENTPD2Q9Y5L3 495 aa7.45□□□□□ -1.22
VPS13D-211ENST00000543710 A3GALT2U3KPV4 340 aa7.45□□□□□ -1.22
VPS13D-211ENST00000543710 P2RX6O15547 441 aa7.44□□□□□ -1.22
VPS13D-211ENST00000543710 TBX1O43435 398 aa7.44□□□□□ -1.22
VPS13D-211ENST00000543710 TGM5O43548 720 aa7.44□□□□□ -1.22
VPS13D-211ENST00000543710 TRAPPC2P0DI81 140 aa7.44□□□□□ -1.22
VPS13D-211ENST00000543710 TRAPPC2BP0DI82 140 aa7.44□□□□□ -1.22
VPS13D-211ENST00000543710 SLC9A3P48764 834 aa7.44□□□□□ -1.22
VPS13D-211ENST00000543710 ELAVL3Q14576 367 aaKnown RBP7.44□□□□□ -1.22
VPS13D-211ENST00000543710 TCTE1Q5JU00 501 aa7.44□□□□□ -1.22
VPS13D-211ENST00000543710 SLC18B1Q6NT16 456 aa7.44□□□□□ -1.22
VPS13D-211ENST00000543710 AGTRAPQ6RW13 159 aa7.44□□□□□ -1.22
VPS13D-211ENST00000543710 GSG1LQ6UXU4 331 aa7.44□□□□□ -1.22
VPS13D-211ENST00000543710 TMIGD1Q6UXZ0 262 aa7.44□□□□□ -1.22
VPS13D-211ENST00000543710 TSPAN33Q86UF1 283 aa7.44□□□□□ -1.22
VPS13D-211ENST00000543710 CPXM2Q8N436 756 aa7.44□□□□□ -1.22
VPS13D-211ENST00000543710 ZNF709Q8N972 641 aa7.44□□□□□ -1.22
VPS13D-211ENST00000543710 SULT4A1Q9BR01 284 aa7.44□□□□□ -1.22
VPS13D-211ENST00000543710 KCNK12Q9HB15 430 aa7.44□□□□□ -1.22
VPS13D-211ENST00000543710 PTPRHQ9HD43 1115 aa7.44□□□□□ -1.22
VPS13D-211ENST00000543710 MALT1Q9UDY8 824 aa7.44□□□□□ -1.22
VPS13D-211ENST00000543710 RIPK3Q9Y572 518 aa7.44□□□□□ -1.22
VPS13D-211ENST00000543710 AGAP5A6NIR3 686 aa7.44□□□□□ -1.22
VPS13D-211ENST00000543710 INMT-MINDY4F8WBC2 141 aa7.44□□□□□ -1.22
VPS13D-211ENST00000543710 ZNF623O75123 536 aa7.44□□□□□ -1.22
VPS13D-211ENST00000543710 RDH16O75452 317 aa7.44□□□□□ -1.22
VPS13D-211ENST00000543710 RAD51DO75771 328 aa7.44□□□□□ -1.22
VPS13D-211ENST00000543710 RBBP9O75884 186 aa7.44□□□□□ -1.22
VPS13D-211ENST00000543710 BCKDHAP12694 445 aa7.44□□□□□ -1.22
VPS13D-211ENST00000543710 HOXA9P31269 272 aa7.44□□□□□ -1.22
VPS13D-211ENST00000543710 ART1P52961 327 aa7.44□□□□□ -1.22
VPS13D-211ENST00000543710 RSPO4Q2I0M5 234 aaPredicted RBP7.44□□□□□ -1.22
VPS13D-211ENST00000543710 CEP97Q8IW35 865 aa7.44□□□□□ -1.22
VPS13D-211ENST00000543710 DTX3Q8N9I9 347 aa7.44□□□□□ -1.22
VPS13D-211ENST00000543710 WDSUB1Q8N9V3 476 aa7.44□□□□□ -1.22
VPS13D-211ENST00000543710 LMO3Q8TAP4 145 aa7.44□□□□□ -1.22
VPS13D-211ENST00000543710 NINJ1Q92982 152 aa7.44□□□□□ -1.22
VPS13D-211ENST00000543710 NKX1-2Q9UD57 310 aaPredicted RBP7.44□□□□□ -1.22
VPS13D-211ENST00000543710 NXT1Q9UKK6 140 aaKnown RBP7.44□□□□□ -1.22
VPS13D-211ENST00000543710 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.44□□□□□ -1.22
VPS13D-211ENST00000543710 YJEFN3A6XGL0 299 aa7.44□□□□□ -1.22
VPS13D-211ENST00000543710 FAM155AB1AL88 458 aaPredicted RBP7.44□□□□□ -1.22
VPS13D-211ENST00000543710 MAOAP21397 527 aa7.44□□□□□ -1.22
VPS13D-211ENST00000543710 HOXD12P35452 270 aa7.44□□□□□ -1.22
VPS13D-211ENST00000543710 RACK1P63244 317 aaKnown RBP7.44□□□□□ -1.22
VPS13D-211ENST00000543710 BLOC1S1P78537 153 aa7.44□□□□□ -1.22
VPS13D-211ENST00000543710 UPP1Q16831 310 aa7.44□□□□□ -1.22
VPS13D-211ENST00000543710 UNC50Q53HI1 259 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms