RNA–Protein interactions for RNA: ENST00000495308.5

FDPS-219, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-219ENST00000495308 IL20RBQ6UXL0 311 aa12.57□□□□□ -0.4
FDPS-219ENST00000495308 FAM47EQ6ZV65 393 aa12.57□□□□□ -0.4
FDPS-219ENST00000495308 LARP4Q71RC2 724 aaKnown RBP eCLIP12.57□□□□□ -0.4
FDPS-219ENST00000495308 ZNF551Q7Z340 670 aaPredicted RBP12.57□□□□□ -0.4
FDPS-219ENST00000495308 R3HCC1LQ7Z5L2 792 aaKnown RBP12.57□□□□□ -0.4
FDPS-219ENST00000495308 CYP4Z2PQ8N1L4 340 aa12.57□□□□□ -0.4
FDPS-219ENST00000495308 ZNF441Q8N8Z8 693 aa12.57□□□□□ -0.4
FDPS-219ENST00000495308 OR7G2Q8NG99 324 aa12.57□□□□□ -0.4
FDPS-219ENST00000495308 CPT1CQ8TCG5 803 aa12.57□□□□□ -0.4
FDPS-219ENST00000495308 ZNF764Q96H86 408 aaPredicted RBP12.57□□□□□ -0.4
FDPS-219ENST00000495308 MAGEB18Q96M61 343 aa12.57□□□□□ -0.4
FDPS-219ENST00000495308 C7orf26Q96N11 449 aa12.57□□□□□ -0.4
FDPS-219ENST00000495308 ITPAQ9BY32 194 aa12.57□□□□□ -0.4
FDPS-219ENST00000495308 ATP6V1HQ9UI12 483 aa12.57□□□□□ -0.4
FDPS-219ENST00000495308 NUP214P35658 2090 aaPredicted RBP12.57□□□□□ -0.4
FDPS-219ENST00000495308 NBASA2RRP1 2371 aa12.56□□□□□ -0.4
FDPS-219ENST00000495308 A8MVJ9 347 aa12.56□□□□□ -0.4
FDPS-219ENST00000495308 ZNF195O14628 629 aa12.56□□□□□ -0.4
FDPS-219ENST00000495308 SLC25A12O75746 678 aa12.56□□□□□ -0.4
FDPS-219ENST00000495308 NADKO95544 446 aaPredicted RBP12.56□□□□□ -0.4
FDPS-219ENST00000495308 SP1P08047 785 aa12.56□□□□□ -0.4
FDPS-219ENST00000495308 PLA2G2AP14555 144 aa12.56□□□□□ -0.4
FDPS-219ENST00000495308 EMDP50402 254 aa12.56□□□□□ -0.4
FDPS-219ENST00000495308 NR0B1P51843 470 aaKnown RBP12.56□□□□□ -0.4
FDPS-219ENST00000495308 NME5P56597 212 aa12.56□□□□□ -0.4
FDPS-219ENST00000495308 HSPB3Q12988 150 aa12.56□□□□□ -0.4
FDPS-219ENST00000495308 PIGGQ5H8A4 983 aa12.56□□□□□ -0.4
FDPS-219ENST00000495308 FHL5Q5TD97 284 aa12.56□□□□□ -0.4
FDPS-219ENST00000495308 HLA-DQA1Q5Y7H0 255 aa12.56□□□□□ -0.4
FDPS-219ENST00000495308 NXNQ6DKJ4 435 aa12.56□□□□□ -0.4
FDPS-219ENST00000495308 TMEM64Q6YI46 380 aa12.56□□□□□ -0.4
FDPS-219ENST00000495308 MDGA2Q7Z553 956 aa12.56□□□□□ -0.4
FDPS-219ENST00000495308 RIMKLAQ8IXN7 391 aa12.56□□□□□ -0.4
FDPS-219ENST00000495308 HORMAD2Q8N7B1 307 aa12.56□□□□□ -0.4
FDPS-219ENST00000495308 ADIPOR1Q96A54 375 aa12.56□□□□□ -0.4
FDPS-219ENST00000495308 SNRNP40Q96DI7 357 aaKnown RBP12.56□□□□□ -0.4
FDPS-219ENST00000495308 MTERF3Q96E29 417 aa12.56□□□□□ -0.4
FDPS-219ENST00000495308 SCMH1Q96GD3 660 aa12.56□□□□□ -0.4
FDPS-219ENST00000495308 MAGED4Q96JG8 741 aa12.56□□□□□ -0.4
FDPS-219ENST00000495308 MARK4Q96L34 752 aa12.56□□□□□ -0.4
FDPS-219ENST00000495308 C5orf34Q96MH7 638 aa12.56□□□□□ -0.4
FDPS-219ENST00000495308 HPF1Q9NWY4 346 aa12.56□□□□□ -0.4
FDPS-219ENST00000495308 ERVK-11Q9UQG0 969 aa12.56□□□□□ -0.4
FDPS-219ENST00000495308 COPG1Q9Y678 874 aaKnown RBP12.56□□□□□ -0.4
FDPS-219ENST00000495308 USH1CQ9Y6N9 552 aa12.56□□□□□ -0.4
FDPS-219ENST00000495308 PLOD3O60568 738 aa12.55□□□□□ -0.4
FDPS-219ENST00000495308 LAMP1P11279 417 aa12.55□□□□□ -0.4
FDPS-219ENST00000495308 CD46P15529 392 aa12.55□□□□□ -0.4
FDPS-219ENST00000495308 PRPS1L1P21108 318 aa12.55□□□□□ -0.4
FDPS-219ENST00000495308 GPC1P35052 558 aa12.55□□□□□ -0.4
FDPS-219ENST00000495308 RPL3P39023 403 aaKnown RBP12.55□□□□□ -0.4
FDPS-219ENST00000495308 FRKP42685 505 aaPredicted RBP12.55□□□□□ -0.4
FDPS-219ENST00000495308 CDK9P50750 372 aaKnown RBP12.55□□□□□ -0.4
FDPS-219ENST00000495308 MANFP55145 182 aaKnown RBP12.55□□□□□ -0.4
FDPS-219ENST00000495308 IGFBP7Q16270 282 aa12.55□□□□□ -0.4
FDPS-219ENST00000495308 CPTPQ5TA50 214 aa12.55□□□□□ -0.4
FDPS-219ENST00000495308 TMEM198Q66K66 360 aa12.55□□□□□ -0.4
FDPS-219ENST00000495308 SLC25A25Q6KCM7 469 aa12.55□□□□□ -0.4
FDPS-219ENST00000495308 OGFOD2Q6N063 350 aa12.55□□□□□ -0.4
FDPS-219ENST00000495308 RPUSD3Q6P087 351 aaKnown RBP12.55□□□□□ -0.4
FDPS-219ENST00000495308 GALNTL5Q7Z4T8 443 aa12.55□□□□□ -0.4
FDPS-219ENST00000495308 PRR22Q8IZ63 422 aa12.55□□□□□ -0.4
FDPS-219ENST00000495308 SLC22A8Q8TCC7 542 aa12.55□□□□□ -0.4
FDPS-219ENST00000495308 ELP4Q96EB1 424 aa12.55□□□□□ -0.4
FDPS-219ENST00000495308 MAELQ96JY0 434 aaKnown RBP12.55□□□□□ -0.4
FDPS-219ENST00000495308 OR52B2Q96RD2 323 aa12.55□□□□□ -0.4
FDPS-219ENST00000495308 TAAR6Q96RI8 345 aa12.55□□□□□ -0.4
FDPS-219ENST00000495308 DPY30Q9C005 99 aa12.55□□□□□ -0.4
FDPS-219ENST00000495308 NXF5Q9H1B4 397 aaKnown RBP12.55□□□□□ -0.4
FDPS-219ENST00000495308 TRIM45Q9H8W5 580 aaPredicted RBP12.55□□□□□ -0.4
FDPS-219ENST00000495308 MED4Q9NPJ6 270 aa12.55□□□□□ -0.4
FDPS-219ENST00000495308 ASF1BQ9NVP2 202 aa12.55□□□□□ -0.4
FDPS-219ENST00000495308 AIG1Q9NVV5 245 aa12.55□□□□□ -0.4
FDPS-219ENST00000495308 NCKAP5O14513 1909 aa12.54□□□□□ -0.4
FDPS-219ENST00000495308 G3V3Y1 287 aa12.54□□□□□ -0.4
FDPS-219ENST00000495308 UPK1AO00322 258 aa12.54□□□□□ -0.4
FDPS-219ENST00000495308 CDK2AP1O14519 115 aa12.54□□□□□ -0.4
FDPS-219ENST00000495308 ATP8B1O43520 1251 aa12.54□□□□□ -0.4
FDPS-219ENST00000495308 NME2P1O60361 137 aa12.54□□□□□ -0.4
FDPS-219ENST00000495308 DIAPH2O60879 1101 aa12.54□□□□□ -0.4
FDPS-219ENST00000495308 NME2P22392 152 aa12.54□□□□□ -0.4
FDPS-219ENST00000495308 CLDN8P56748 225 aa12.54□□□□□ -0.4
FDPS-219ENST00000495308 GPR85P60893 370 aa12.54□□□□□ -0.4
FDPS-219ENST00000495308 ZNF155Q12901 538 aaPredicted RBP12.54□□□□□ -0.4
FDPS-219ENST00000495308 MAPKAPK3Q16644 382 aa12.54□□□□□ -0.4
FDPS-219ENST00000495308 PGS1Q32NB8 556 aa12.54□□□□□ -0.4
FDPS-219ENST00000495308 OPN5Q6U736 354 aa12.54□□□□□ -0.4
FDPS-219ENST00000495308 LYPD8Q6UX82 237 aa12.54□□□□□ -0.4
FDPS-219ENST00000495308 LRRC34Q8IZ02 419 aa12.54□□□□□ -0.4
FDPS-219ENST00000495308 TMEM178AQ8NBL3 297 aa12.54□□□□□ -0.4
FDPS-219ENST00000495308 ZFP28Q8NHY6 868 aa12.54□□□□□ -0.4
FDPS-219ENST00000495308 GRHL3Q8TE85 626 aa12.54□□□□□ -0.4
FDPS-219ENST00000495308 TP53INP1Q96A56 240 aa12.54□□□□□ -0.4
FDPS-219ENST00000495308 TMEM125Q96AQ2 219 aa12.54□□□□□ -0.4
FDPS-219ENST00000495308 ERP27Q96DN0 273 aa12.54□□□□□ -0.4
FDPS-219ENST00000495308 ZBED6CLQ96FA7 236 aaPredicted RBP12.54□□□□□ -0.4
FDPS-219ENST00000495308 THOC1Q96FV9 657 aaKnown RBP12.54□□□□□ -0.4
FDPS-219ENST00000495308 EBF4Q9BQW3 602 aa12.54□□□□□ -0.4
FDPS-219ENST00000495308 FOLH1BQ9HBA9 442 aa12.54□□□□□ -0.4
FDPS-219ENST00000495308 DDX18Q9NVP1 670 aaKnown RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms