RNA–Protein interactions for RNA: ENST00000452448.6

EPHA3-202, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-202ENST00000452448 MYH15Q9Y2K3 1946 aa4.72□□□□□ -1.65
EPHA3-202ENST00000452448 ZNF541Q9H0D2 1346 aa4.71□□□□□ -1.65
EPHA3-202ENST00000452448 LNP1A1A4G5 178 aa4.71□□□□□ -1.66
EPHA3-202ENST00000452448 SLC22A23A1A5C7 686 aa4.71□□□□□ -1.66
EPHA3-202ENST00000452448 MPTX1A8MV57 137 aa4.71□□□□□ -1.66
EPHA3-202ENST00000452448 KCNU1A8MYU2 1149 aa4.71□□□□□ -1.66
EPHA3-202ENST00000452448 BTBD18B2RXH4 712 aa4.71□□□□□ -1.66
EPHA3-202ENST00000452448 KRBOX1C9JBD0 128 aa4.71□□□□□ -1.66
EPHA3-202ENST00000452448 TMEM189-UBE2V1I3L0A0 370 aa4.71□□□□□ -1.66
EPHA3-202ENST00000452448 LIASO43766 372 aa4.71□□□□□ -1.66
EPHA3-202ENST00000452448 HCN1O60741 890 aa4.71□□□□□ -1.66
EPHA3-202ENST00000452448 TBX19O60806 448 aa4.71□□□□□ -1.66
EPHA3-202ENST00000452448 GLCEO94923 617 aa4.71□□□□□ -1.66
EPHA3-202ENST00000452448 FTLP02792 175 aaPredicted RBP4.71□□□□□ -1.66
EPHA3-202ENST00000452448 KLKB1P03952 638 aa4.71□□□□□ -1.66
EPHA3-202ENST00000452448 RRASP10301 218 aa4.71□□□□□ -1.66
EPHA3-202ENST00000452448 UROSP10746 265 aa4.71□□□□□ -1.66
EPHA3-202ENST00000452448 ZNF182P17025 639 aaPredicted RBP4.71□□□□□ -1.66
EPHA3-202ENST00000452448 TPH1P17752 444 aa4.71□□□□□ -1.66
EPHA3-202ENST00000452448 PSMC3P17980 439 aa4.71□□□□□ -1.66
EPHA3-202ENST00000452448 CD33P20138 364 aa4.71□□□□□ -1.66
EPHA3-202ENST00000452448 VIPR1P32241 457 aa4.71□□□□□ -1.66
EPHA3-202ENST00000452448 HSD17B3P37058 310 aa4.71□□□□□ -1.66
EPHA3-202ENST00000452448 MMP12P39900 470 aa4.71□□□□□ -1.66
EPHA3-202ENST00000452448 RFC3P40938 356 aa4.71□□□□□ -1.66
EPHA3-202ENST00000452448 CDH15P55291 814 aa4.71□□□□□ -1.66
EPHA3-202ENST00000452448 VSX2P58304 361 aaPredicted RBP4.71□□□□□ -1.66
EPHA3-202ENST00000452448 ACTR2P61160 394 aa4.71□□□□□ -1.66
EPHA3-202ENST00000452448 MAXP61244 160 aa4.71□□□□□ -1.66
EPHA3-202ENST00000452448 ARF6P62330 175 aa4.71□□□□□ -1.66
EPHA3-202ENST00000452448 NFATC3Q12968 1075 aa4.71□□□□□ -1.66
EPHA3-202ENST00000452448 PLA2G7Q13093 441 aa4.71□□□□□ -1.66
EPHA3-202ENST00000452448 SLC13A2Q13183 592 aa4.71□□□□□ -1.66
EPHA3-202ENST00000452448 SLAMF1Q13291 335 aa4.71□□□□□ -1.66
EPHA3-202ENST00000452448 SKP2Q13309 424 aa4.71□□□□□ -1.66
EPHA3-202ENST00000452448 IRF3Q14653 427 aa4.71□□□□□ -1.66
EPHA3-202ENST00000452448 PLAC9Q5JTB6 97 aa4.71□□□□□ -1.66
EPHA3-202ENST00000452448 SPOUT1Q5T280 376 aaKnown RBP4.71□□□□□ -1.66
EPHA3-202ENST00000452448 CERCAMQ5T4B2 595 aa4.71□□□□□ -1.66
EPHA3-202ENST00000452448 GCNT6Q5T4J0 391 aa4.71□□□□□ -1.66
EPHA3-202ENST00000452448 TTC23Q5W5X9 447 aa4.71□□□□□ -1.66
EPHA3-202ENST00000452448 ULK3Q6PHR2 472 aa4.71□□□□□ -1.66
EPHA3-202ENST00000452448 ATRAIDQ6UW56 229 aa4.71□□□□□ -1.66
EPHA3-202ENST00000452448 C3P1Q6ZMU1 363 aa4.71□□□□□ -1.66
EPHA3-202ENST00000452448 SLC35D2Q76EJ3 337 aa4.71□□□□□ -1.66
EPHA3-202ENST00000452448 OVCH1Q7RTY7 1134 aa4.71□□□□□ -1.66
EPHA3-202ENST00000452448 PID1Q7Z2X4 250 aa4.71□□□□□ -1.66
EPHA3-202ENST00000452448 VN1R5Q7Z5H4 357 aa4.71□□□□□ -1.66
EPHA3-202ENST00000452448 FUNDC1Q8IVP5 155 aa4.71□□□□□ -1.66
EPHA3-202ENST00000452448 ZNF34Q8IZ26 560 aa4.71□□□□□ -1.66
EPHA3-202ENST00000452448 FRMD1Q8N878 549 aa4.71□□□□□ -1.66
EPHA3-202ENST00000452448 FAM98AQ8NCA5 519 aaKnown RBP4.71□□□□□ -1.66
EPHA3-202ENST00000452448 GRHL3Q8TE85 626 aa4.71□□□□□ -1.66
EPHA3-202ENST00000452448 DUSP19Q8WTR2 217 aa4.71□□□□□ -1.66
EPHA3-202ENST00000452448 THAP4Q8WY91 577 aa4.71□□□□□ -1.66
EPHA3-202ENST00000452448 EXTL1Q92935 676 aa4.71□□□□□ -1.66
EPHA3-202ENST00000452448 KAT5Q92993 513 aa4.71□□□□□ -1.66
EPHA3-202ENST00000452448 FAM162AQ96A26 154 aa4.71□□□□□ -1.66
EPHA3-202ENST00000452448 ARRDC3Q96B67 414 aa4.71□□□□□ -1.66
EPHA3-202ENST00000452448 ECHDC3Q96DC8 303 aa4.71□□□□□ -1.66
EPHA3-202ENST00000452448 NEIL1Q96FI4 390 aaPredicted RBP4.71□□□□□ -1.66
EPHA3-202ENST00000452448 PEX11GQ96HA9 241 aa4.71□□□□□ -1.66
EPHA3-202ENST00000452448 ZNF512Q96ME7 567 aaPredicted RBP4.71□□□□□ -1.66
EPHA3-202ENST00000452448 FOXN4Q96NZ1 517 aa4.71□□□□□ -1.66
EPHA3-202ENST00000452448 OR52B2Q96RD2 323 aa4.71□□□□□ -1.66
EPHA3-202ENST00000452448 SLC30A3Q99726 388 aa4.71□□□□□ -1.66
EPHA3-202ENST00000452448 CMSS1Q9BQ75 279 aaKnown RBP4.71□□□□□ -1.66
EPHA3-202ENST00000452448 TMEM47Q9BQJ4 181 aa4.71□□□□□ -1.66
EPHA3-202ENST00000452448 SUCNR1Q9BXA5 334 aa4.71□□□□□ -1.66
EPHA3-202ENST00000452448 MIXL1Q9H2W2 232 aa4.71□□□□□ -1.66
EPHA3-202ENST00000452448 MUC13Q9H3R2 512 aa4.71□□□□□ -1.66
EPHA3-202ENST00000452448 TMEM38AQ9H6F2 299 aa4.71□□□□□ -1.66
EPHA3-202ENST00000452448 REEP4Q9H6H4 257 aa4.71□□□□□ -1.66
EPHA3-202ENST00000452448 RIOX1Q9H6W3 641 aa4.71□□□□□ -1.66
EPHA3-202ENST00000452448 NANOGQ9H9S0 305 aa4.71□□□□□ -1.66
EPHA3-202ENST00000452448 BCO1Q9HAY6 547 aa4.71□□□□□ -1.66
EPHA3-202ENST00000452448 AKIP1Q9NQ31 210 aa4.71□□□□□ -1.66
EPHA3-202ENST00000452448 YAE1D1Q9NRH1 226 aa4.71□□□□□ -1.66
EPHA3-202ENST00000452448 CHST7Q9NS84 486 aa4.71□□□□□ -1.66
EPHA3-202ENST00000452448 C5P01031 1676 aa4.71□□□□□ -1.66
EPHA3-202ENST00000452448 CICQ96RK0 1608 aaPredicted RBP4.71□□□□□ -1.66
EPHA3-202ENST00000452448 ABCA3Q99758 1704 aa4.71□□□□□ -1.66
EPHA3-202ENST00000452448 TBC1D3KA0A087X1G2 549 aa4.71□□□□□ -1.66
EPHA3-202ENST00000452448 TRAV25A0A0B4J276 109 aa4.71□□□□□ -1.66
EPHA3-202ENST00000452448 TBC1D3FA6NER0 549 aaPredicted RBP4.71□□□□□ -1.66
EPHA3-202ENST00000452448 H3BQ06 376 aaPredicted RBP4.71□□□□□ -1.66
EPHA3-202ENST00000452448 K7EQM0 130 aa4.71□□□□□ -1.66
EPHA3-202ENST00000452448 GFRA2O00451 464 aa4.71□□□□□ -1.66
EPHA3-202ENST00000452448 GSC2O15499 205 aa4.71□□□□□ -1.66
EPHA3-202ENST00000452448 PJA2O43164 708 aa4.71□□□□□ -1.66
EPHA3-202ENST00000452448 TGOLN2O43493 480 aa4.71□□□□□ -1.66
EPHA3-202ENST00000452448 TCF21O43680 179 aa4.71□□□□□ -1.66
EPHA3-202ENST00000452448 LANCL1O43813 399 aa4.71□□□□□ -1.66
EPHA3-202ENST00000452448 MRPS14O60783 128 aaKnown RBP4.71□□□□□ -1.66
EPHA3-202ENST00000452448 OR2B3O76000 313 aa4.71□□□□□ -1.66
EPHA3-202ENST00000452448 OR2J2O76002 312 aa4.71□□□□□ -1.66
EPHA3-202ENST00000452448 CBX6O95503 412 aa4.71□□□□□ -1.66
EPHA3-202ENST00000452448 ATP1A1P05023 1023 aaKnown RBP4.71□□□□□ -1.66
EPHA3-202ENST00000452448 GPIP06744 558 aa4.71□□□□□ -1.66
EPHA3-202ENST00000452448 ABHD2P08910 425 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms