RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 ACOT4Q8N9L9 421 aa15.87■□□□□ 0.13
PHRF1-201ENST00000264555 SH3YL1Q96HL8 342 aaPredicted RBP15.87■□□□□ 0.13
PHRF1-201ENST00000264555 COG8Q96MW5 612 aa15.87■□□□□ 0.13
PHRF1-201ENST00000264555 POLE3Q9NRF9 147 aa15.87■□□□□ 0.13
PHRF1-201ENST00000264555 CENPMQ9NSP4 180 aa15.87■□□□□ 0.13
PHRF1-201ENST00000264555 STUB1Q9UNE7 303 aa15.87■□□□□ 0.13
PHRF1-201ENST00000264555 MAGED1Q9Y5V3 778 aaPredicted RBP15.87■□□□□ 0.13
PHRF1-201ENST00000264555 FAM221BA6H8Z2 402 aa15.87■□□□□ 0.13
PHRF1-201ENST00000264555 TAPBPO15533 448 aa15.87■□□□□ 0.13
PHRF1-201ENST00000264555 HK3P52790 923 aa15.87■□□□□ 0.13
PHRF1-201ENST00000264555 CHERPQ8IWX8 916 aaKnown RBP15.87■□□□□ 0.13
PHRF1-201ENST00000264555 GPALPP1Q8IXQ4 340 aa15.87■□□□□ 0.13
PHRF1-201ENST00000264555 POLDIP3Q9BY77 421 aaKnown RBP15.87■□□□□ 0.13
PHRF1-201ENST00000264555 CD300AQ9UGN4 299 aa15.87■□□□□ 0.13
PHRF1-201ENST00000264555 PCDHGA8Q9Y5G5 932 aa15.87■□□□□ 0.13
PHRF1-201ENST00000264555 XIRP1Q702N8 1843 aaKnown RBP15.87■□□□□ 0.13
PHRF1-201ENST00000264555 C7orf72A4D263 438 aa15.87■□□□□ 0.13
PHRF1-201ENST00000264555 SLC22A31A6NKX4 558 aa15.87■□□□□ 0.13
PHRF1-201ENST00000264555 SLC19A2O60779 497 aa15.87■□□□□ 0.13
PHRF1-201ENST00000264555 KLK3P07288 261 aaPredicted RBP15.87■□□□□ 0.13
PHRF1-201ENST00000264555 THEGLP0DJG4 465 aa15.87■□□□□ 0.13
PHRF1-201ENST00000264555 HSF2Q03933 536 aa15.87■□□□□ 0.13
PHRF1-201ENST00000264555 SPRED1Q7Z699 444 aa15.87■□□□□ 0.13
PHRF1-201ENST00000264555 FNDC8Q8TC99 324 aa15.87■□□□□ 0.13
PHRF1-201ENST00000264555 TUBB1Q9H4B7 451 aa15.87■□□□□ 0.13
PHRF1-201ENST00000264555 OR6C2Q9NZP2 312 aa15.87■□□□□ 0.13
PHRF1-201ENST00000264555 A0A1B0GVT2 93 aa15.87■□□□□ 0.13
PHRF1-201ENST00000264555 GPR4P46093 362 aa15.87■□□□□ 0.13
PHRF1-201ENST00000264555 GBX1Q14549 363 aa15.87■□□□□ 0.13
PHRF1-201ENST00000264555 QSOX2Q6ZRP7 698 aa15.87■□□□□ 0.13
PHRF1-201ENST00000264555 SPARTQ8N0X7 666 aa15.87■□□□□ 0.13
PHRF1-201ENST00000264555 METTL4Q8N3J2 472 aa15.87■□□□□ 0.13
PHRF1-201ENST00000264555 LINC01599Q8WXQ3 324 aa15.87■□□□□ 0.13
PHRF1-201ENST00000264555 SMPDL3BQ92485 455 aa15.87■□□□□ 0.13
PHRF1-201ENST00000264555 GAL3ST3Q96A11 431 aa15.87■□□□□ 0.13
PHRF1-201ENST00000264555 CASC3O15234 703 aaKnown RBP15.87■□□□□ 0.13
PHRF1-201ENST00000264555 FOXD2O60548 495 aaPredicted RBP15.87■□□□□ 0.13
PHRF1-201ENST00000264555 KLHL18O94889 574 aa15.87■□□□□ 0.13
PHRF1-201ENST00000264555 MRPL3P09001 348 aaKnown RBP15.87■□□□□ 0.13
PHRF1-201ENST00000264555 MMP12P39900 470 aa15.87■□□□□ 0.13
PHRF1-201ENST00000264555 ELOAQ14241 798 aaKnown RBP15.87■□□□□ 0.13
PHRF1-201ENST00000264555 LIMS2Q7Z4I7 341 aa15.87■□□□□ 0.13
PHRF1-201ENST00000264555 PTRH1Q86Y79 214 aaKnown RBP15.87■□□□□ 0.13
PHRF1-201ENST00000264555 NEK7Q8TDX7 302 aa15.87■□□□□ 0.13
PHRF1-201ENST00000264555 THRSPQ92748 146 aa15.87■□□□□ 0.13
PHRF1-201ENST00000264555 PINK1Q9BXM7 581 aa15.87■□□□□ 0.13
PHRF1-201ENST00000264555 LAMP5Q9UJQ1 280 aa15.87■□□□□ 0.13
PHRF1-201ENST00000264555 PCDHGB6Q9Y5F9 930 aa15.87■□□□□ 0.13
PHRF1-201ENST00000264555 PMF1-BGLAPU3KQ54 211 aa15.87■□□□□ 0.13
PHRF1-201ENST00000264555 GJA4P35212 333 aa15.86■□□□□ 0.13
PHRF1-201ENST00000264555 GGT2P36268 569 aa15.86■□□□□ 0.13
PHRF1-201ENST00000264555 MTNR1AP48039 350 aa15.86■□□□□ 0.13
PHRF1-201ENST00000264555 POU4F2Q12837 409 aa15.86■□□□□ 0.13
PHRF1-201ENST00000264555 OR5K2Q8NHB8 316 aa15.86■□□□□ 0.13
PHRF1-201ENST00000264555 SLC41A3Q96GZ6 507 aa15.86■□□□□ 0.13
PHRF1-201ENST00000264555 EPHX3Q9H6B9 360 aa15.86■□□□□ 0.13
PHRF1-201ENST00000264555 SMURF1Q9HCE7 757 aa15.86■□□□□ 0.13
PHRF1-201ENST00000264555 IFT46Q9NQC8 304 aa15.86■□□□□ 0.13
PHRF1-201ENST00000264555 SMIM30A4D0T7 59 aa15.86■□□□□ 0.13
PHRF1-201ENST00000264555 TRAPPC13A5PLN9 417 aa15.86■□□□□ 0.13
PHRF1-201ENST00000264555 FLRT2O43155 660 aa15.86■□□□□ 0.13
PHRF1-201ENST00000264555 ZNF217O75362 1048 aa15.86■□□□□ 0.13
PHRF1-201ENST00000264555 S100GP29377 79 aa15.86■□□□□ 0.13
PHRF1-201ENST00000264555 P2RY2P41231 377 aa15.86■□□□□ 0.13
PHRF1-201ENST00000264555 ADAM8P78325 824 aa15.86■□□□□ 0.13
PHRF1-201ENST00000264555 PIN1Q13526 163 aaPredicted RBP15.86■□□□□ 0.13
PHRF1-201ENST00000264555 MAD2L1BPQ15013 274 aaPredicted RBP15.86■□□□□ 0.13
PHRF1-201ENST00000264555 ZNF440Q8IYI8 595 aa15.86■□□□□ 0.13
PHRF1-201ENST00000264555 OR4K17Q8NGC6 315 aa15.86■□□□□ 0.13
PHRF1-201ENST00000264555 FAM46AQ96IP4 442 aaKnown RBP15.86■□□□□ 0.13
PHRF1-201ENST00000264555 ABCD2Q9UBJ2 740 aa15.86■□□□□ 0.13
PHRF1-201ENST00000264555 INTS6Q9UL03 887 aaKnown RBP15.86■□□□□ 0.13
PHRF1-201ENST00000264555 ANTXRLA6NF34 631 aa15.86■□□□□ 0.13
PHRF1-201ENST00000264555 CXCR4P61073 352 aa15.86■□□□□ 0.13
PHRF1-201ENST00000264555 NCS1P62166 190 aa15.86■□□□□ 0.13
PHRF1-201ENST00000264555 LRRC26Q2I0M4 334 aa15.86■□□□□ 0.13
PHRF1-201ENST00000264555 PLPP6Q8IY26 295 aa15.86■□□□□ 0.13
PHRF1-201ENST00000264555 ZDHHC1Q8WTX9 485 aa15.86■□□□□ 0.13
PHRF1-201ENST00000264555 GATAD2BQ8WXI9 593 aa15.86■□□□□ 0.13
PHRF1-201ENST00000264555 DAZLQ92904 295 aaKnown RBP15.86■□□□□ 0.13
PHRF1-201ENST00000264555 TIGARQ9NQ88 270 aa15.86■□□□□ 0.13
PHRF1-201ENST00000264555 C2orf92A0A1B0GVN3 265 aa15.86■□□□□ 0.13
PHRF1-201ENST00000264555 M0R3H8 397 aa15.86■□□□□ 0.13
PHRF1-201ENST00000264555 NOS1APO75052 506 aaPredicted RBP15.86■□□□□ 0.13
PHRF1-201ENST00000264555 ALPLP05186 524 aa15.86■□□□□ 0.13
PHRF1-201ENST00000264555 NR2C1P13056 603 aa15.86■□□□□ 0.13
PHRF1-201ENST00000264555 ZNF20P17024 532 aa15.86■□□□□ 0.13
PHRF1-201ENST00000264555 MC3RP41968 323 aa15.86■□□□□ 0.13
PHRF1-201ENST00000264555 HBA1P69905 142 aa15.86■□□□□ 0.13
PHRF1-201ENST00000264555 XKR7Q5GH72 579 aa15.86■□□□□ 0.13
PHRF1-201ENST00000264555 PLEKHG7Q6ZR37 379 aa15.86■□□□□ 0.13
PHRF1-201ENST00000264555 TRIM73Q86UV7 250 aa15.86■□□□□ 0.13
PHRF1-201ENST00000264555 ACBD7Q8N6N7 88 aa15.86■□□□□ 0.13
PHRF1-201ENST00000264555 HSPA12BQ96MM6 686 aa15.86■□□□□ 0.13
PHRF1-201ENST00000264555 DPAGT1Q9H3H5 408 aa15.86■□□□□ 0.13
PHRF1-201ENST00000264555 ABCG2Q9UNQ0 655 aa15.86■□□□□ 0.13
PHRF1-201ENST00000264555 HCRTR2O43614 444 aa15.85■□□□□ 0.13
PHRF1-201ENST00000264555 SLCO2B1O94956 709 aa15.85■□□□□ 0.13
PHRF1-201ENST00000264555 SLC25A24Q6NUK1 477 aa15.85■□□□□ 0.13
PHRF1-201ENST00000264555 RNF111Q6ZNA4 994 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms