RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Grhl2Q8K5C0 625 aa14.85□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Olfr103Q920Y8 313 aa14.85□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Gtpbp3Q923K4 492 aa14.85□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Wdr73Q9CWR1 371 aa14.85□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Upk3bl1Q9D701 249 aa14.85□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Cbfa2t3O54972 620 aa14.85□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Cdc25bP30306 576 aa14.85□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Treml2Q2LA85 329 aa14.85□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Hectd3Q3U487 861 aa14.85□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Pwwp2aQ69Z61 730 aa14.85□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Dcaf13Q6PAC3 445 aaKnown RBP14.85□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Dlec1Q8BLA1 635 aa14.85□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Zc2hc1cQ8CCG1 527 aa14.85□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 MepceQ8K3A9 666 aaKnown RBP14.85□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Zc3h10Q8R205 435 aaKnown RBP14.85□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Olfr1469Q8VFW5 309 aa14.85□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Gorasp1Q91X51 446 aa14.85□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Ubox5Q925F4 539 aa14.85□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 AcoxlQ9DBS4 632 aa14.85□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Hcar2Q9EP66 360 aa14.85□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Bin3Q9JI08 253 aa14.85□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Adam21Q9JI76 729 aa14.85□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Il17dA0A0B4J1G4 205 aa14.84□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Tceal7A3KGA4 98 aa14.84□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Tmem233D3Z1U7 110 aa14.84□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 RhoP15409 348 aa14.84□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Cmklr1P97468 371 aa14.84□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Q3KQP7 184 aa14.84□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Pea15Q62048 130 aa14.84□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 CishQ62225 257 aa14.84□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 HopxQ8R1H0 73 aa14.84□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Cyb5r1Q9DB73 305 aa14.84□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Phc2Q9QWH1 850 aa14.84□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Tyk2Q9R117 1184 aa14.84□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Gm3542K7N6U2 270 aa14.84□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Gm8281L7N235 204 aa14.84□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Entpd2O55026 495 aa14.84□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 AdaP03958 352 aa14.84□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Cd9P40240 226 aa14.84□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Mep1bQ61847 704 aa14.84□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Apex2Q68G58 516 aa14.84□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Cmtr2Q8BWQ4 767 aa14.84□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Defb36Q8K3U4 67 aa14.84□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Olfr1052Q8VGR8 312 aa14.84□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 1700034I23RikQ9D9Q3 184 aa14.84□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Pdzk1Q9JIL4 519 aa14.84□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Mia3Q8BI84 1930 aa14.84□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Cylc1A0A1B0GR13 642 aa14.84□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Arhgap40E9Q6X9 672 aa14.84□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Gm6619F6URP1 175 aa14.84□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 ThP24529 498 aa14.84□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Cyp17a1P27786 507 aa14.84□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Pde7aP70453 456 aa14.84□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 CcnjQ3TZI6 379 aa14.84□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 MagixQ4KL35 324 aa14.84□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Znf786Q8BV42 777 aa14.84□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Dlgap5Q8K4R9 808 aa14.84□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Olfr398Q8VFY0 314 aa14.84□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Olfr643Q8VGY1 314 aa14.84□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Akirin1Q99LF1 191 aa14.84□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Pnp2Q9D8C9 305 aa14.84□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Znf318Q99PP2 2237 aa14.84□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 OgdhlE9Q7L0 1029 aa14.84□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Olfr618K7N6B3 318 aa14.84□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Anxa2P07356 339 aaKnown RBP14.84□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Ptger4P32240 513 aa14.84□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 E330014E10RikQ3UL33 481 aa14.84□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Lingo2Q3URE9 606 aa14.84□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 D5Ertd577eQ499F0 481 aa14.84□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Trmt12Q8BG71 446 aa14.84□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 SynbQ8BI41 618 aa14.84□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Apbb3Q8R1C9 486 aa14.84□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Olfr729Q8VET4 323 aa14.84□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Abcg4Q91WA9 646 aa14.84□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Rassf1Q99MK9 340 aa14.84□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Sohlh2Q9D489 467 aa14.84□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Tvp23bQ9D8T4 205 aa14.84□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Cypt12Q9DAR6 119 aa14.84□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Gm11758A2BEI6 360 aa14.83□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Gm11757A2BEI8 360 aa14.83□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Sac3d1A6H687 427 aa14.83□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Olfr172E9Q8F6 309 aa14.83□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Vmn2r75G5E8Z7 853 aa14.83□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Dsc3P55850 896 aa14.83□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Nell1Q2VWQ2 810 aa14.83□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Ankrd37Q569N2 159 aa14.83□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Taar7fQ5QD08 358 aa14.83□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Taar7eQ5QD09 358 aa14.83□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Taar7bQ5QD11 358 aa14.83□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Smad2Q62432 467 aa14.83□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 EnkurQ6SP97 255 aa14.83□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Sult1c1Q80VR3 304 aa14.83□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 MaobQ8BW75 520 aa14.83□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Lacc1Q8BZT9 430 aa14.83□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Nipal2Q91WC7 383 aa14.83□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Otud4B2RRE7 1107 aaKnown RBP14.83□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Pcsk6F6XJP7 959 aa14.83□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Cd93O89103 644 aa14.83□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Serpine2Q07235 397 aa14.83□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 FcamrQ2TB54 535 aa14.83□□□□□ -0.04
Retrieved 100 of 22,080 RNA–protein pairs in 35.5 ms