Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 Gm25239-201ENSMUST00000174915 86 ntBASIC36.23■■■■□ 3.39
SynbQ8BI41 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC33.6■■■□□ 2.97
SynbQ8BI41 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
SynbQ8BI41 Gm24109-201ENSMUST00000175489 103 ntBASIC31.48■■■□□ 2.63
SynbQ8BI41 Gm15042-201ENSMUST00000120212 883 ntBASIC31.45■■■□□ 2.63
SynbQ8BI41 Gm15045-201ENSMUST00000117359 883 ntBASIC30.69■■■□□ 2.5
SynbQ8BI41 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC30.62■■■□□ 2.49
SynbQ8BI41 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
SynbQ8BI41 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
SynbQ8BI41 Gm23366-201ENSMUST00000175022 89 ntBASIC30.27■■■□□ 2.44
SynbQ8BI41 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
SynbQ8BI41 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
SynbQ8BI41 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
SynbQ8BI41 AC153911.1-202ENSMUST00000218534 1034 ntBASIC29.45■■■□□ 2.31
SynbQ8BI41 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
SynbQ8BI41 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
SynbQ8BI41 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC29.19■■■□□ 2.26
SynbQ8BI41 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC29.18■■■□□ 2.26
SynbQ8BI41 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
SynbQ8BI41 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC29.11■■■□□ 2.25
SynbQ8BI41 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
SynbQ8BI41 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
SynbQ8BI41 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
SynbQ8BI41 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
SynbQ8BI41 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC28.75■■■□□ 2.19
SynbQ8BI41 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC28.67■■■□□ 2.18
SynbQ8BI41 Gm25238-201ENSMUST00000174914 89 ntBASIC28.66■■■□□ 2.18
SynbQ8BI41 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28.65■■■□□ 2.18
SynbQ8BI41 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
SynbQ8BI41 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC28.42■■■□□ 2.14
SynbQ8BI41 Psd-208ENSMUST00000224556 2034 ntBASIC28.36■■■□□ 2.13
SynbQ8BI41 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
SynbQ8BI41 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
SynbQ8BI41 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC28.18■■■□□ 2.1
SynbQ8BI41 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC28.12■■■□□ 2.09
SynbQ8BI41 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC28.07■■■□□ 2.08
SynbQ8BI41 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
SynbQ8BI41 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC27.96■■■□□ 2.07
SynbQ8BI41 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC27.9■■■□□ 2.06
SynbQ8BI41 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC27.84■■■□□ 2.05
SynbQ8BI41 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC27.82■■■□□ 2.04
SynbQ8BI41 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
SynbQ8BI41 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
SynbQ8BI41 Gm25262-201ENSMUST00000174934 133 ntBASIC27.63■■■□□ 2.01
SynbQ8BI41 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC27.54■■■□□ 2
SynbQ8BI41 Gm27325-201ENSMUST00000175467 74 ntBASIC27.52■■■□□ 2
SynbQ8BI41 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC27.5■■□□□ 1.99
SynbQ8BI41 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC27.46■■□□□ 1.99
SynbQ8BI41 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC27.32■■□□□ 1.96
SynbQ8BI41 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC27.27■■□□□ 1.96
SynbQ8BI41 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
SynbQ8BI41 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
SynbQ8BI41 Rab21-202ENSMUST00000218831 843 ntBASIC27.2■■□□□ 1.94
SynbQ8BI41 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC27.14■■□□□ 1.94
SynbQ8BI41 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC27.13■■□□□ 1.93
SynbQ8BI41 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
SynbQ8BI41 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
SynbQ8BI41 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
SynbQ8BI41 Gm26115-201ENSMUST00000175605 87 ntBASIC27.04■■□□□ 1.92
SynbQ8BI41 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC27.02■■□□□ 1.92
SynbQ8BI41 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC27■■□□□ 1.91
SynbQ8BI41 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC26.95■■□□□ 1.91
SynbQ8BI41 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC26.92■■□□□ 1.9
SynbQ8BI41 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
SynbQ8BI41 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.89
SynbQ8BI41 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
SynbQ8BI41 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
SynbQ8BI41 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC26.85■■□□□ 1.89
SynbQ8BI41 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
SynbQ8BI41 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC26.84■■□□□ 1.89
SynbQ8BI41 Gm8109-201ENSMUST00000194076 746 ntBASIC26.82■■□□□ 1.88
SynbQ8BI41 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC26.8■■□□□ 1.88
SynbQ8BI41 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
SynbQ8BI41 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC26.75■■□□□ 1.87
SynbQ8BI41 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
SynbQ8BI41 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
SynbQ8BI41 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
SynbQ8BI41 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
SynbQ8BI41 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC26.61■■□□□ 1.85
SynbQ8BI41 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC26.61■■□□□ 1.85
SynbQ8BI41 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
SynbQ8BI41 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
SynbQ8BI41 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC26.57■■□□□ 1.84
SynbQ8BI41 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
SynbQ8BI41 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC26.52■■□□□ 1.84
SynbQ8BI41 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
SynbQ8BI41 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
SynbQ8BI41 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC26.49■■□□□ 1.83
SynbQ8BI41 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
SynbQ8BI41 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC26.41■■□□□ 1.82
SynbQ8BI41 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.82
SynbQ8BI41 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.82
SynbQ8BI41 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SynbQ8BI41 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
SynbQ8BI41 Gm17082-201ENSMUST00000166043 1091 ntBASIC26.25■■□□□ 1.79
SynbQ8BI41 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC26.25■■□□□ 1.79
SynbQ8BI41 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
SynbQ8BI41 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC26.2■■□□□ 1.78
SynbQ8BI41 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
SynbQ8BI41 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms