RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 EMP3P54852 163 aa9.78□□□□□ -0.84
VPS25-203ENST00000589520 CASP9P55211 416 aa9.78□□□□□ -0.84
VPS25-203ENST00000589520 CDH12P55289 794 aa9.78□□□□□ -0.84
VPS25-203ENST00000589520 RAB38P57729 211 aa9.78□□□□□ -0.84
VPS25-203ENST00000589520 IL5RAQ01344 420 aa9.78□□□□□ -0.84
VPS25-203ENST00000589520 IL1RL1Q01638 556 aa9.78□□□□□ -0.84
VPS25-203ENST00000589520 PPP1R8Q12972 351 aaKnown RBP9.78□□□□□ -0.84
VPS25-203ENST00000589520 RUNX2Q13950 521 aa9.78□□□□□ -0.84
VPS25-203ENST00000589520 GAS6Q14393 721 aa9.78□□□□□ -0.84
VPS25-203ENST00000589520 CCDC85BQ15834 202 aaPredicted RBP9.78□□□□□ -0.84
VPS25-203ENST00000589520 DUSP7Q16829 419 aa9.78□□□□□ -0.84
VPS25-203ENST00000589520 PROX2Q3B8N5 592 aa9.78□□□□□ -0.84
VPS25-203ENST00000589520 WDR45BQ5MNZ6 344 aa9.78□□□□□ -0.84
VPS25-203ENST00000589520 DCST1Q5T197 706 aa9.78□□□□□ -0.84
VPS25-203ENST00000589520 GARNL3Q5VVW2 1013 aa9.78□□□□□ -0.84
VPS25-203ENST00000589520 CDC73Q6P1J9 531 aa9.78□□□□□ -0.84
VPS25-203ENST00000589520 TSEN54Q7Z6J9 526 aaKnown RBP9.78□□□□□ -0.84
VPS25-203ENST00000589520 GALNT10Q86SR1 603 aa9.78□□□□□ -0.84
VPS25-203ENST00000589520 TRIM73Q86UV7 250 aa9.78□□□□□ -0.84
VPS25-203ENST00000589520 C17orf82Q86X59 251 aaPredicted RBP9.78□□□□□ -0.84
VPS25-203ENST00000589520 TAGAPQ8N103 731 aa9.78□□□□□ -0.84
VPS25-203ENST00000589520 GALNT15Q8N3T1 639 aa9.78□□□□□ -0.84
VPS25-203ENST00000589520 ARL14Q8N4G2 192 aa9.78□□□□□ -0.84
VPS25-203ENST00000589520 CSNK1A1LQ8N752 337 aa9.78□□□□□ -0.84
VPS25-203ENST00000589520 ADAMTS15Q8TE58 950 aa9.78□□□□□ -0.84
VPS25-203ENST00000589520 APOBEC4Q8WW27 367 aaKnown RBP9.78□□□□□ -0.84
VPS25-203ENST00000589520 RAB8BQ92930 207 aa9.78□□□□□ -0.84
VPS25-203ENST00000589520 DHRS1Q96LJ7 313 aa9.78□□□□□ -0.84
VPS25-203ENST00000589520 MS4A4EQ96PG1 132 aa9.78□□□□□ -0.84
VPS25-203ENST00000589520 ALPK1Q96QP1 1244 aa9.78□□□□□ -0.84
VPS25-203ENST00000589520 CD180Q99467 661 aa9.78□□□□□ -0.84
VPS25-203ENST00000589520 SLC38A3Q99624 504 aa9.78□□□□□ -0.84
VPS25-203ENST00000589520 MACROD1Q9BQ69 325 aa9.78□□□□□ -0.84
VPS25-203ENST00000589520 LRRC61Q9BV99 259 aa9.78□□□□□ -0.84
VPS25-203ENST00000589520 SOX17Q9H6I2 414 aaPredicted RBP9.78□□□□□ -0.84
VPS25-203ENST00000589520 C11orf16Q9NQ32 467 aa9.78□□□□□ -0.84
VPS25-203ENST00000589520 SLC13A4Q9UKG4 626 aa9.78□□□□□ -0.84
VPS25-203ENST00000589520 ACAD8Q9UKU7 415 aa9.78□□□□□ -0.84
VPS25-203ENST00000589520 MGAT4BQ9UQ53 548 aa9.78□□□□□ -0.84
VPS25-203ENST00000589520 IFT52Q9Y366 437 aa9.78□□□□□ -0.84
VPS25-203ENST00000589520 TESMINQ9Y4I5 508 aa9.78□□□□□ -0.84
VPS25-203ENST00000589520 ATG2BQ96BY7 2078 aa9.78□□□□□ -0.84
VPS25-203ENST00000589520 MYOCOSA0A1B0GUC4 107 aa9.77□□□□□ -0.85
VPS25-203ENST00000589520 GLOD5A6NK44 160 aa9.77□□□□□ -0.85
VPS25-203ENST00000589520 NOL3O60936 208 aaKnown RBP9.77□□□□□ -0.85
VPS25-203ENST00000589520 MITFO75030 526 aaPredicted RBP9.77□□□□□ -0.85
VPS25-203ENST00000589520 UBXN7O94888 489 aa9.77□□□□□ -0.85
VPS25-203ENST00000589520 GPR75O95800 540 aa9.77□□□□□ -0.85
VPS25-203ENST00000589520 ANGPTL1O95841 491 aa9.77□□□□□ -0.85
VPS25-203ENST00000589520 LGI1O95970 557 aa9.77□□□□□ -0.85
VPS25-203ENST00000589520 ADAP00813 363 aa9.77□□□□□ -0.85
VPS25-203ENST00000589520 GUSBP08236 651 aa9.77□□□□□ -0.85
VPS25-203ENST00000589520 CPMP14384 443 aa9.77□□□□□ -0.85
VPS25-203ENST00000589520 NELFEP18615 380 aaKnown RBP9.77□□□□□ -0.85
VPS25-203ENST00000589520 CDH3P22223 829 aa9.77□□□□□ -0.85
VPS25-203ENST00000589520 ELK4P28324 431 aa9.77□□□□□ -0.85
VPS25-203ENST00000589520 IFNGR2P38484 337 aa9.77□□□□□ -0.85
VPS25-203ENST00000589520 FEN1P39748 380 aaKnown RBP9.77□□□□□ -0.85
VPS25-203ENST00000589520 OR1E2P47887 323 aa9.77□□□□□ -0.85
VPS25-203ENST00000589520 PRKAG1P54619 331 aa9.77□□□□□ -0.85
VPS25-203ENST00000589520 RPP38P78345 283 aaKnown RBP9.77□□□□□ -0.85
VPS25-203ENST00000589520 HPCAP84074 193 aa9.77□□□□□ -0.85
VPS25-203ENST00000589520 MVKQ03426 396 aa9.77□□□□□ -0.85
VPS25-203ENST00000589520 COX10Q12887 443 aa9.77□□□□□ -0.85
VPS25-203ENST00000589520 PUM1Q14671 1186 aaKnown RBP eCLIP9.77□□□□□ -0.85
VPS25-203ENST00000589520 LASP1Q14847 261 aaKnown RBP9.77□□□□□ -0.85
VPS25-203ENST00000589520 MAPK11Q15759 364 aa9.77□□□□□ -0.85
VPS25-203ENST00000589520 MEP1AQ16819 746 aa9.77□□□□□ -0.85
VPS25-203ENST00000589520 EXOC3L2Q2M3D2 409 aa9.77□□□□□ -0.85
VPS25-203ENST00000589520 DEFB134Q4QY38 66 aa9.77□□□□□ -0.85
VPS25-203ENST00000589520 TCTE1Q5JU00 501 aa9.77□□□□□ -0.85
VPS25-203ENST00000589520 AP1ARQ63HQ0 302 aa9.77□□□□□ -0.85
VPS25-203ENST00000589520 HEPHL1Q6MZM0 1159 aa9.77□□□□□ -0.85
VPS25-203ENST00000589520 TMEM107Q6UX40 140 aa9.77□□□□□ -0.85
VPS25-203ENST00000589520 KCTD8Q6ZWB6 473 aa9.77□□□□□ -0.85
VPS25-203ENST00000589520 SZRD1Q7Z422 152 aa9.77□□□□□ -0.85
VPS25-203ENST00000589520 SLC44A2Q8IWA5 706 aaPredicted RBP9.77□□□□□ -0.85
VPS25-203ENST00000589520 OR2L13Q8N349 312 aa9.77□□□□□ -0.85
VPS25-203ENST00000589520 SVOPQ8N4V2 548 aa9.77□□□□□ -0.85
VPS25-203ENST00000589520 C19orf47Q8N9M1 422 aaKnown RBP9.77□□□□□ -0.85
VPS25-203ENST00000589520 SMYD1Q8NB12 490 aa9.77□□□□□ -0.85
VPS25-203ENST00000589520 TOR1AIP2Q8NFQ8 470 aa9.77□□□□□ -0.85
VPS25-203ENST00000589520 OR9A2Q8NGT5 310 aa9.77□□□□□ -0.85
VPS25-203ENST00000589520 ZNF675Q8TD23 568 aa9.77□□□□□ -0.85
VPS25-203ENST00000589520 RLN3Q8WXF3 142 aa9.77□□□□□ -0.85
VPS25-203ENST00000589520 UCN3Q969E3 161 aa9.77□□□□□ -0.85
VPS25-203ENST00000589520 COL21A1Q96P44 957 aa9.77□□□□□ -0.85
VPS25-203ENST00000589520 OR7D2Q96RA2 312 aa9.77□□□□□ -0.85
VPS25-203ENST00000589520 STACQ99469 402 aa9.77□□□□□ -0.85
VPS25-203ENST00000589520 FEVQ99581 238 aa9.77□□□□□ -0.85
VPS25-203ENST00000589520 TPSD1Q9BZJ3 242 aa9.77□□□□□ -0.85
VPS25-203ENST00000589520 POLR2J2Q9GZM3 115 aaKnown RBP9.77□□□□□ -0.85
VPS25-203ENST00000589520 POLR2J3Q9H1A7 115 aaKnown RBP9.77□□□□□ -0.85
VPS25-203ENST00000589520 MTHFD2LQ9H903 347 aaPredicted RBP9.77□□□□□ -0.85
VPS25-203ENST00000589520 ERVMER34-1Q9H9K5 563 aa9.77□□□□□ -0.85
VPS25-203ENST00000589520 IL21RQ9HBE5 538 aa9.77□□□□□ -0.85
VPS25-203ENST00000589520 ANKHQ9HCJ1 492 aa9.77□□□□□ -0.85
VPS25-203ENST00000589520 PLCXD1Q9NUJ7 323 aa9.77□□□□□ -0.85
VPS25-203ENST00000589520 KLHL28Q9NXS3 571 aa9.77□□□□□ -0.85
VPS25-203ENST00000589520 ZNF232Q9UNY5 417 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms