RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 GPC1P35052 558 aa14.34□□□□□ -0.11
SCAMP4-202ENST00000409472 FEN1P39748 380 aaKnown RBP14.34□□□□□ -0.11
SCAMP4-202ENST00000409472 PRKAG1P54619 331 aa14.34□□□□□ -0.11
SCAMP4-202ENST00000409472 ELOAQ14241 798 aaKnown RBP14.34□□□□□ -0.11
SCAMP4-202ENST00000409472 WDR45BQ5MNZ6 344 aa14.34□□□□□ -0.11
SCAMP4-202ENST00000409472 SIGIRRQ6IA17 410 aa14.34□□□□□ -0.11
SCAMP4-202ENST00000409472 SPERTQ8NA61 448 aa14.34□□□□□ -0.11
SCAMP4-202ENST00000409472 UTP15Q8TED0 518 aaKnown RBP14.34□□□□□ -0.11
SCAMP4-202ENST00000409472 BMFQ96LC9 184 aa14.34□□□□□ -0.11
SCAMP4-202ENST00000409472 COL21A1Q96P44 957 aa14.34□□□□□ -0.11
SCAMP4-202ENST00000409472 TREX2Q9BQ50 279 aaPredicted RBP14.34□□□□□ -0.11
SCAMP4-202ENST00000409472 PITHD1Q9GZP4 211 aaPredicted RBP14.34□□□□□ -0.11
SCAMP4-202ENST00000409472 MVB12BQ9H7P6 319 aa14.34□□□□□ -0.11
SCAMP4-202ENST00000409472 MARCH7Q9H992 704 aa14.34□□□□□ -0.11
SCAMP4-202ENST00000409472 GPN2Q9H9Y4 310 aaPredicted RBP14.34□□□□□ -0.11
SCAMP4-202ENST00000409472 ACOT13Q9NPJ3 140 aa14.34□□□□□ -0.11
SCAMP4-202ENST00000409472 SLC35C2Q9NQQ7 365 aa14.34□□□□□ -0.11
SCAMP4-202ENST00000409472 ADAM29Q9UKF5 820 aa14.34□□□□□ -0.11
SCAMP4-202ENST00000409472 PSME2Q9UL46 239 aa14.34□□□□□ -0.11
SCAMP4-202ENST00000409472 TPRKBQ9Y3C4 175 aa14.34□□□□□ -0.11
SCAMP4-202ENST00000409472 PCDHGB1Q9Y5G3 927 aa14.34□□□□□ -0.11
SCAMP4-202ENST00000409472 PIAS3Q9Y6X2 628 aa14.34□□□□□ -0.11
SCAMP4-202ENST00000409472 SLC22A1O15245 554 aa14.33□□□□□ -0.11
SCAMP4-202ENST00000409472 RGS10O43665 173 aa14.33□□□□□ -0.11
SCAMP4-202ENST00000409472 SLC28A2O43868 658 aa14.33□□□□□ -0.11
SCAMP4-202ENST00000409472 TPPPO94811 219 aa14.33□□□□□ -0.11
SCAMP4-202ENST00000409472 GASTP01350 101 aa14.33□□□□□ -0.11
SCAMP4-202ENST00000409472 CHRM5P08912 532 aaPredicted RBP14.33□□□□□ -0.11
SCAMP4-202ENST00000409472 CBLP22681 906 aa14.33□□□□□ -0.11
SCAMP4-202ENST00000409472 ATP5A1P25705 553 aaKnown RBP14.33□□□□□ -0.11
SCAMP4-202ENST00000409472 CXCR4P61073 352 aa14.33□□□□□ -0.11
SCAMP4-202ENST00000409472 LSM11P83369 360 aaKnown RBP eCLIP14.33□□□□□ -0.11
SCAMP4-202ENST00000409472 ZNF770Q6IQ21 691 aaPredicted RBP14.33□□□□□ -0.11
SCAMP4-202ENST00000409472 DEF8Q6ZN54 512 aa14.33□□□□□ -0.11
SCAMP4-202ENST00000409472 VN1R4Q7Z5H5 301 aa14.33□□□□□ -0.11
SCAMP4-202ENST00000409472 AKAP14Q86UN6 197 aa14.33□□□□□ -0.11
SCAMP4-202ENST00000409472 PHF10Q8WUB8 498 aaKnown RBP14.33□□□□□ -0.11
SCAMP4-202ENST00000409472 S100ZQ8WXG8 99 aa14.33□□□□□ -0.11
SCAMP4-202ENST00000409472 RPL3LQ92901 407 aaKnown RBP14.33□□□□□ -0.11
SCAMP4-202ENST00000409472 ZNF486Q96H40 463 aaPredicted RBP14.33□□□□□ -0.11
SCAMP4-202ENST00000409472 SLC35G5Q96KT7 338 aa14.33□□□□□ -0.11
SCAMP4-202ENST00000409472 QRSL1Q9H0R6 528 aaKnown RBP14.33□□□□□ -0.11
SCAMP4-202ENST00000409472 NMNAT1Q9HAN9 279 aaPredicted RBP14.33□□□□□ -0.11
SCAMP4-202ENST00000409472 TMEM74BQ9NUR3 256 aa14.33□□□□□ -0.11
SCAMP4-202ENST00000409472 TRPC4Q9UBN4 977 aa14.33□□□□□ -0.11
SCAMP4-202ENST00000409472 KCND3Q9UK17 655 aa14.33□□□□□ -0.11
SCAMP4-202ENST00000409472 RABL2BQ9UNT1 228 aa14.33□□□□□ -0.11
SCAMP4-202ENST00000409472 KCNE3Q9Y6H6 103 aa14.33□□□□□ -0.11
SCAMP4-202ENST00000409472 M0R3H8 397 aa14.33□□□□□ -0.12
SCAMP4-202ENST00000409472 ADRA2AP08913 450 aa14.33□□□□□ -0.12
SCAMP4-202ENST00000409472 PERM1Q5SV97 790 aa14.33□□□□□ -0.12
SCAMP4-202ENST00000409472 SDE2Q6IQ49 451 aa14.33□□□□□ -0.12
SCAMP4-202ENST00000409472 ZNF425Q6IV72 752 aa14.33□□□□□ -0.12
SCAMP4-202ENST00000409472 TCTN3Q6NUS6 607 aa14.33□□□□□ -0.12
SCAMP4-202ENST00000409472 KLHL17Q6TDP4 642 aa14.33□□□□□ -0.12
SCAMP4-202ENST00000409472 TMEM107Q6UX40 140 aa14.33□□□□□ -0.12
SCAMP4-202ENST00000409472 WDR53Q7Z5U6 358 aaPredicted RBP14.33□□□□□ -0.12
SCAMP4-202ENST00000409472 CCDC116Q8IYX3 515 aa14.33□□□□□ -0.12
SCAMP4-202ENST00000409472 PSMA8Q8TAA3 256 aa14.33□□□□□ -0.12
SCAMP4-202ENST00000409472 NDNFQ8TB73 568 aa14.33□□□□□ -0.12
SCAMP4-202ENST00000409472 XAGE5Q8WWM1 108 aa14.33□□□□□ -0.12
SCAMP4-202ENST00000409472 LCN9Q8WX39 176 aa14.33□□□□□ -0.12
SCAMP4-202ENST00000409472 PATE1Q8WXA2 126 aa14.33□□□□□ -0.12
SCAMP4-202ENST00000409472 RORBQ92753 470 aa14.33□□□□□ -0.12
SCAMP4-202ENST00000409472 C16orf58Q96GQ5 468 aa14.33□□□□□ -0.12
SCAMP4-202ENST00000409472 RAB11FIP5Q9BXF6 653 aa14.33□□□□□ -0.12
SCAMP4-202ENST00000409472 ALOXE3Q9BYJ1 711 aa14.33□□□□□ -0.12
SCAMP4-202ENST00000409472 C6orf106Q9H6K1 298 aaPredicted RBP14.33□□□□□ -0.12
SCAMP4-202ENST00000409472 ACSS1Q9NUB1 689 aaPredicted RBP14.33□□□□□ -0.12
SCAMP4-202ENST00000409472 SCN3BQ9NY72 215 aa14.33□□□□□ -0.12
SCAMP4-202ENST00000409472 POFUT2Q9Y2G5 429 aa14.33□□□□□ -0.12
SCAMP4-202ENST00000409472 DNAJB6O75190 326 aa14.32□□□□□ -0.12
SCAMP4-202ENST00000409472 EPPINO95925 133 aa14.32□□□□□ -0.12
SCAMP4-202ENST00000409472 IFNA14P01570 189 aa14.32□□□□□ -0.12
SCAMP4-202ENST00000409472 ITGA2P17301 1181 aa14.32□□□□□ -0.12
SCAMP4-202ENST00000409472 GABRB1P18505 474 aa14.32□□□□□ -0.12
SCAMP4-202ENST00000409472 ACTR1BP42025 376 aa14.32□□□□□ -0.12
SCAMP4-202ENST00000409472 ACTR1AP61163 376 aa14.32□□□□□ -0.12
SCAMP4-202ENST00000409472 IFITM2Q01629 132 aa14.32□□□□□ -0.12
SCAMP4-202ENST00000409472 LASP1Q14847 261 aaKnown RBP14.32□□□□□ -0.12
SCAMP4-202ENST00000409472 SLC9A5Q14940 896 aa14.32□□□□□ -0.12
SCAMP4-202ENST00000409472 MRM1Q6IN84 353 aaKnown RBP14.32□□□□□ -0.12
SCAMP4-202ENST00000409472 AMIGO1Q86WK6 493 aa14.32□□□□□ -0.12
SCAMP4-202ENST00000409472 RPLP0P6Q8NHW5 317 aa14.32□□□□□ -0.12
SCAMP4-202ENST00000409472 C1QTNF7Q9BXJ2 289 aa14.32□□□□□ -0.12
SCAMP4-202ENST00000409472 HOXD1Q9GZZ0 328 aa14.32□□□□□ -0.12
SCAMP4-202ENST00000409472 GPR83Q9NYM4 423 aa14.32□□□□□ -0.12
SCAMP4-202ENST00000409472 TAS2R16Q9NYV7 291 aa14.32□□□□□ -0.12
SCAMP4-202ENST00000409472 TAS2R7Q9NYW3 318 aa14.32□□□□□ -0.12
SCAMP4-202ENST00000409472 LRP4O75096 1905 aa14.32□□□□□ -0.12
SCAMP4-202ENST00000409472 CCNB2O95067 398 aa14.32□□□□□ -0.12
SCAMP4-202ENST00000409472 SOX14O95416 240 aa14.32□□□□□ -0.12
SCAMP4-202ENST00000409472 CHRM4P08173 479 aa14.32□□□□□ -0.12
SCAMP4-202ENST00000409472 ANXA8P13928 327 aa14.32□□□□□ -0.12
SCAMP4-202ENST00000409472 RHCEP18577 417 aa14.32□□□□□ -0.12
SCAMP4-202ENST00000409472 TGM1P22735 817 aa14.32□□□□□ -0.12
SCAMP4-202ENST00000409472 IDUAP35475 653 aa14.32□□□□□ -0.12
SCAMP4-202ENST00000409472 GRK3P35626 688 aa14.32□□□□□ -0.12
SCAMP4-202ENST00000409472 NFATC4Q14934 902 aa14.32□□□□□ -0.12
SCAMP4-202ENST00000409472 LTB4RQ15722 352 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms