RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 SYNPOQ8N3V7 929 aa8.38□□□□□ -1.07
RTN4-206ENST00000394611 SRFBP1Q8NEF9 429 aaKnown RBP8.38□□□□□ -1.07
RTN4-206ENST00000394611 CYB5D2Q8WUJ1 264 aa8.38□□□□□ -1.07
RTN4-206ENST00000394611 GEMIN6Q8WXD5 167 aaKnown RBP8.38□□□□□ -1.07
RTN4-206ENST00000394611 ACOT12Q8WYK0 555 aa8.38□□□□□ -1.07
RTN4-206ENST00000394611 KCNN1Q92952 543 aa8.38□□□□□ -1.07
RTN4-206ENST00000394611 C2orf49Q9BVC5 232 aaPredicted RBP8.38□□□□□ -1.07
RTN4-206ENST00000394611 CLMPQ9H6B4 373 aa8.38□□□□□ -1.07
RTN4-206ENST00000394611 HEBP1Q9NRV9 189 aa8.38□□□□□ -1.07
RTN4-206ENST00000394611 STOML2Q9UJZ1 356 aa8.38□□□□□ -1.07
RTN4-206ENST00000394611 LSM7Q9UK45 103 aaKnown RBP8.38□□□□□ -1.07
RTN4-206ENST00000394611 PCDHB1Q9Y5F3 818 aa8.38□□□□□ -1.07
RTN4-206ENST00000394611 DNAJC13O75165 2243 aa8.38□□□□□ -1.07
RTN4-206ENST00000394611 FAM170BA6NMN3 283 aa8.38□□□□□ -1.07
RTN4-206ENST00000394611 ANHXE9PGG2 379 aa8.38□□□□□ -1.07
RTN4-206ENST00000394611 NEDD8-MDP1E9PL57 170 aa8.38□□□□□ -1.07
RTN4-206ENST00000394611 SLC16A6O15403 523 aa8.38□□□□□ -1.07
RTN4-206ENST00000394611 PRKRAO75569 313 aaKnown RBP8.38□□□□□ -1.07
RTN4-206ENST00000394611 ARHGEF15O94989 841 aa8.38□□□□□ -1.07
RTN4-206ENST00000394611 IFNA7P01567 189 aa8.38□□□□□ -1.07
RTN4-206ENST00000394611 ANXA3P12429 323 aa8.38□□□□□ -1.07
RTN4-206ENST00000394611 CD6P30203 668 aa8.38□□□□□ -1.07
RTN4-206ENST00000394611 HOXA9P31269 272 aa8.38□□□□□ -1.07
RTN4-206ENST00000394611 PYCR1P32322 319 aa8.38□□□□□ -1.07
RTN4-206ENST00000394611 RPL4P36578 427 aaKnown RBP8.38□□□□□ -1.07
RTN4-206ENST00000394611 NUP62P37198 522 aaPredicted RBP8.38□□□□□ -1.07
RTN4-206ENST00000394611 WASP42768 502 aa8.38□□□□□ -1.07
RTN4-206ENST00000394611 PSMD8P48556 350 aa8.38□□□□□ -1.07
RTN4-206ENST00000394611 ADAM15Q13444 863 aa8.38□□□□□ -1.07
RTN4-206ENST00000394611 KEAP1Q14145 624 aa8.38□□□□□ -1.07
RTN4-206ENST00000394611 OTPQ5XKR4 325 aa8.38□□□□□ -1.07
RTN4-206ENST00000394611 TMEM220Q6QAJ8 160 aa8.38□□□□□ -1.07
RTN4-206ENST00000394611 CHPFQ8IZ52 775 aa8.38□□□□□ -1.07
RTN4-206ENST00000394611 APCDD1Q8J025 514 aa8.38□□□□□ -1.07
RTN4-206ENST00000394611 UMODL1-AS1Q8N2C9 162 aa8.38□□□□□ -1.07
RTN4-206ENST00000394611 OR5J2Q8NH18 312 aa8.38□□□□□ -1.07
RTN4-206ENST00000394611 RFT1Q96AA3 541 aa8.38□□□□□ -1.07
RTN4-206ENST00000394611 MED30Q96HR3 178 aa8.38□□□□□ -1.07
RTN4-206ENST00000394611 TMEM248Q9NWD8 314 aa8.38□□□□□ -1.07
RTN4-206ENST00000394611 TXNL4BQ9NX01 149 aaKnown RBP8.38□□□□□ -1.07
RTN4-206ENST00000394611 NDUFAF4Q9P032 175 aa8.38□□□□□ -1.07
RTN4-206ENST00000394611 MGAT4CQ9UBM8 478 aa8.38□□□□□ -1.07
RTN4-206ENST00000394611 ABHD14A-ACY1A0A1B0GW23 586 aa8.38□□□□□ -1.07
RTN4-206ENST00000394611 TOR1AO14656 332 aa8.38□□□□□ -1.07
RTN4-206ENST00000394611 CSF2RAP15509 400 aa8.38□□□□□ -1.07
RTN4-206ENST00000394611 LCN1P31025 176 aa8.38□□□□□ -1.07
RTN4-206ENST00000394611 ACSL1P33121 698 aa8.38□□□□□ -1.07
RTN4-206ENST00000394611 PRKCDQ05655 676 aa8.38□□□□□ -1.07
RTN4-206ENST00000394611 UPP1Q16831 310 aa8.38□□□□□ -1.07
RTN4-206ENST00000394611 XKR7Q5GH72 579 aa8.38□□□□□ -1.07
RTN4-206ENST00000394611 FAM129CQ86XR2 697 aa8.38□□□□□ -1.07
RTN4-206ENST00000394611 TMC8Q8IU68 726 aa8.38□□□□□ -1.07
RTN4-206ENST00000394611 ZFPM2Q8WW38 1151 aa8.38□□□□□ -1.07
RTN4-206ENST00000394611 HTATIP2Q9BUP3 242 aa8.38□□□□□ -1.07
RTN4-206ENST00000394611 OR51I1Q9H343 314 aa8.38□□□□□ -1.07
RTN4-206ENST00000394611 IMP3Q9NV31 184 aaKnown RBP8.38□□□□□ -1.07
RTN4-206ENST00000394611 SPATA6Q9NWH7 488 aaPredicted RBP8.38□□□□□ -1.07
RTN4-206ENST00000394611 FLVCR2Q9UPI3 526 aa8.38□□□□□ -1.07
RTN4-206ENST00000394611 GRIP1Q9Y3R0 1128 aa8.38□□□□□ -1.07
RTN4-206ENST00000394611 PCDHB7Q9Y5E2 793 aa8.38□□□□□ -1.07
RTN4-206ENST00000394611 PCDHB11Q9Y5F2 797 aa8.38□□□□□ -1.07
RTN4-206ENST00000394611 MROH6A6NGR9 719 aa8.37□□□□□ -1.07
RTN4-206ENST00000394611 PROM1O43490 865 aa8.37□□□□□ -1.07
RTN4-206ENST00000394611 RB1P06400 928 aa8.37□□□□□ -1.07
RTN4-206ENST00000394611 EPHX1P07099 455 aa8.37□□□□□ -1.07
RTN4-206ENST00000394611 ACRP10323 421 aa8.37□□□□□ -1.07
RTN4-206ENST00000394611 BPIP17213 487 aa8.37□□□□□ -1.07
RTN4-206ENST00000394611 BMP7P18075 431 aa8.37□□□□□ -1.07
RTN4-206ENST00000394611 AHRP35869 848 aa8.37□□□□□ -1.07
RTN4-206ENST00000394611 NDUFAF6Q330K2 333 aa8.37□□□□□ -1.07
RTN4-206ENST00000394611 COQ5Q5HYK3 327 aa8.37□□□□□ -1.07
RTN4-206ENST00000394611 GPRC6AQ5T6X5 926 aa8.37□□□□□ -1.07
RTN4-206ENST00000394611 NDUFAF7Q7L592 441 aa8.37□□□□□ -1.07
RTN4-206ENST00000394611 DBF4BQ8NFT6 615 aa8.37□□□□□ -1.07
RTN4-206ENST00000394611 WDR48Q8TAF3 677 aa8.37□□□□□ -1.07
RTN4-206ENST00000394611 C2CD4CQ8TF44 421 aa8.37□□□□□ -1.07
RTN4-206ENST00000394611 NT5C3BQ969T7 300 aa8.37□□□□□ -1.07
RTN4-206ENST00000394611 TMEM19Q96HH6 336 aa8.37□□□□□ -1.07
RTN4-206ENST00000394611 PIP5K1AQ99755 562 aa8.37□□□□□ -1.07
RTN4-206ENST00000394611 GPR174Q9BXC1 333 aa8.37□□□□□ -1.07
RTN4-206ENST00000394611 GPR62Q9BZJ7 368 aa8.37□□□□□ -1.07
RTN4-206ENST00000394611 SLC25A18Q9H1K4 315 aa8.37□□□□□ -1.07
RTN4-206ENST00000394611 MRM3Q9HC36 420 aaKnown RBP8.37□□□□□ -1.07
RTN4-206ENST00000394611 UBQLN2Q9UHD9 624 aa8.37□□□□□ -1.07
RTN4-206ENST00000394611 TSPAN6O43657 245 aa8.37□□□□□ -1.07
RTN4-206ENST00000394611 TIMP1P01033 207 aa8.37□□□□□ -1.07
RTN4-206ENST00000394611 KCNE1P15382 129 aa8.37□□□□□ -1.07
RTN4-206ENST00000394611 LHCGRP22888 699 aa8.37□□□□□ -1.07
RTN4-206ENST00000394611 TEAD4Q15561 434 aa8.37□□□□□ -1.07
RTN4-206ENST00000394611 MICAQ29983 383 aa8.37□□□□□ -1.07
RTN4-206ENST00000394611 C4orf46Q504U0 113 aa8.37□□□□□ -1.07
RTN4-206ENST00000394611 ANXA8L1Q5VT79 327 aa8.37□□□□□ -1.07
RTN4-206ENST00000394611 TMEM88Q6PEY1 159 aa8.37□□□□□ -1.07
RTN4-206ENST00000394611 CXXC5Q7LFL8 322 aaKnown RBP8.37□□□□□ -1.07
RTN4-206ENST00000394611 OR4K5Q8NGD3 323 aa8.37□□□□□ -1.07
RTN4-206ENST00000394611 C1orf216Q8TAB5 229 aa8.37□□□□□ -1.07
RTN4-206ENST00000394611 CCDC32Q9BV29 185 aa8.37□□□□□ -1.07
RTN4-206ENST00000394611 RIOK2Q9BVS4 552 aaKnown RBP8.37□□□□□ -1.07
RTN4-206ENST00000394611 SLC29A3Q9BZD2 475 aa8.37□□□□□ -1.07
RTN4-206ENST00000394611 OR2AG1Q9H205 316 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms