RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 PRODH2Q9UF12 536 aa17.15■□□□□ 0.34
CHTOP-202ENST00000368687 NTNG1Q9Y2I2 539 aa17.15■□□□□ 0.34
CHTOP-202ENST00000368687 RAP2CQ9Y3L5 183 aa17.15■□□□□ 0.34
CHTOP-202ENST00000368687 C2orf92A0A1B0GVN3 265 aa17.14■□□□□ 0.33
CHTOP-202ENST00000368687 WDR91A4D1P6 747 aa17.14■□□□□ 0.33
CHTOP-202ENST00000368687 ANKUB1A6NFN9 424 aa17.14■□□□□ 0.33
CHTOP-202ENST00000368687 RPL3P39023 403 aaKnown RBP17.14■□□□□ 0.33
CHTOP-202ENST00000368687 RPL38P63173 70 aaKnown RBP17.14■□□□□ 0.33
CHTOP-202ENST00000368687 MAD2L1Q13257 205 aaPredicted RBP17.14■□□□□ 0.33
CHTOP-202ENST00000368687 STX3Q13277 289 aa17.14■□□□□ 0.33
CHTOP-202ENST00000368687 ZNF468Q5VIY5 522 aaPredicted RBP17.14■□□□□ 0.33
CHTOP-202ENST00000368687 FAM219BQ5XKK7 198 aa17.14■□□□□ 0.33
CHTOP-202ENST00000368687 ZNF324BQ6AW86 544 aaPredicted RBP17.14■□□□□ 0.33
CHTOP-202ENST00000368687 GALNTL5Q7Z4T8 443 aa17.14■□□□□ 0.33
CHTOP-202ENST00000368687 FAM9CQ8IZT9 166 aa17.14■□□□□ 0.33
CHTOP-202ENST00000368687 MMP21Q8N119 569 aa17.14■□□□□ 0.33
CHTOP-202ENST00000368687 CDC26Q8NHZ8 85 aa17.14■□□□□ 0.33
CHTOP-202ENST00000368687 AGR3Q8TD06 166 aa17.14■□□□□ 0.33
CHTOP-202ENST00000368687 EXOSC8Q96B26 276 aaKnown RBP17.14■□□□□ 0.33
CHTOP-202ENST00000368687 CTHRC1Q96CG8 243 aa17.14■□□□□ 0.33
CHTOP-202ENST00000368687 TAAR6Q96RI8 345 aa17.14■□□□□ 0.33
CHTOP-202ENST00000368687 BBS4Q96RK4 519 aa17.14■□□□□ 0.33
CHTOP-202ENST00000368687 PAIP2Q9BPZ3 127 aaKnown RBP17.14■□□□□ 0.33
CHTOP-202ENST00000368687 MAT2BQ9NZL9 334 aa17.14■□□□□ 0.33
CHTOP-202ENST00000368687 ZDHHC2Q9UIJ5 367 aa17.14■□□□□ 0.33
CHTOP-202ENST00000368687 POLEQ07864 2286 aa17.14■□□□□ 0.33
CHTOP-202ENST00000368687 TMEM233B4DJY2 109 aa17.13■□□□□ 0.33
CHTOP-202ENST00000368687 HRKO00198 91 aa17.13■□□□□ 0.33
CHTOP-202ENST00000368687 CBX6O95503 412 aa17.13■□□□□ 0.33
CHTOP-202ENST00000368687 IFI6P09912 130 aa17.13■□□□□ 0.33
CHTOP-202ENST00000368687 SSTR4P31391 388 aa17.13■□□□□ 0.33
CHTOP-202ENST00000368687 SOX3P41225 446 aa17.13■□□□□ 0.33
CHTOP-202ENST00000368687 SLC1A6P48664 564 aa17.13■□□□□ 0.33
CHTOP-202ENST00000368687 DCAF7P61962 342 aa17.13■□□□□ 0.33
CHTOP-202ENST00000368687 MPP2Q14168 576 aa17.13■□□□□ 0.33
CHTOP-202ENST00000368687 SMU1Q2TAY7 513 aa17.13■□□□□ 0.33
CHTOP-202ENST00000368687 ATG16L1Q676U5 607 aa17.13■□□□□ 0.33
CHTOP-202ENST00000368687 R3HCC1LQ7Z5L2 792 aaKnown RBP17.13■□□□□ 0.33
CHTOP-202ENST00000368687 ZNF615Q8N8J6 731 aa17.13■□□□□ 0.33
CHTOP-202ENST00000368687 ANKRD42Q8N9B4 389 aa17.13■□□□□ 0.33
CHTOP-202ENST00000368687 PSD4Q8NDX1 1056 aa17.13■□□□□ 0.33
CHTOP-202ENST00000368687 OR2T11Q8NH01 316 aa17.13■□□□□ 0.33
CHTOP-202ENST00000368687 MTERF3Q96E29 417 aa17.13■□□□□ 0.33
CHTOP-202ENST00000368687 SPACA9Q96E40 222 aaPredicted RBP17.13■□□□□ 0.33
CHTOP-202ENST00000368687 ZNF639Q9UID6 485 aa17.13■□□□□ 0.33
CHTOP-202ENST00000368687 HAO1Q9UJM8 370 aa17.13■□□□□ 0.33
CHTOP-202ENST00000368687 PTGDR2Q9Y5Y4 395 aa17.13■□□□□ 0.33
CHTOP-202ENST00000368687 A0A1W2PS29 197 aa17.12■□□□□ 0.33
CHTOP-202ENST00000368687 ACOX3O15254 700 aa17.12■□□□□ 0.33
CHTOP-202ENST00000368687 TBX19O60806 448 aa17.12■□□□□ 0.33
CHTOP-202ENST00000368687 OR6B1O95007 311 aa17.12■□□□□ 0.33
CHTOP-202ENST00000368687 PCSK2P16519 638 aa17.12■□□□□ 0.33
CHTOP-202ENST00000368687 GNLYP22749 145 aa17.12■□□□□ 0.33
CHTOP-202ENST00000368687 ARRB2P32121 409 aa17.12■□□□□ 0.33
CHTOP-202ENST00000368687 RPL14P50914 215 aaKnown RBP17.12■□□□□ 0.33
CHTOP-202ENST00000368687 RPP38P78345 283 aaKnown RBP17.12■□□□□ 0.33
CHTOP-202ENST00000368687 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.12■□□□□ 0.33
CHTOP-202ENST00000368687 GALNTL6Q49A17 601 aa17.12■□□□□ 0.33
CHTOP-202ENST00000368687 RFTN2Q52LD8 501 aaPredicted RBP17.12■□□□□ 0.33
CHTOP-202ENST00000368687 KRTCAP3Q53RY4 240 aa17.12■□□□□ 0.33
CHTOP-202ENST00000368687 IL20RBQ6UXL0 311 aa17.12■□□□□ 0.33
CHTOP-202ENST00000368687 BNC2Q6ZN30 1099 aaPredicted RBP17.12■□□□□ 0.33
CHTOP-202ENST00000368687 ZNF227Q86WZ6 799 aa17.12■□□□□ 0.33
CHTOP-202ENST00000368687 TICAM1Q8IUC6 712 aa17.12■□□□□ 0.33
CHTOP-202ENST00000368687 CCDC116Q8IYX3 515 aa17.12■□□□□ 0.33
CHTOP-202ENST00000368687 LRRC34Q8IZ02 419 aa17.12■□□□□ 0.33
CHTOP-202ENST00000368687 ZNF441Q8N8Z8 693 aa17.12■□□□□ 0.33
CHTOP-202ENST00000368687 FRMD6Q96NE9 622 aa17.12■□□□□ 0.33
CHTOP-202ENST00000368687 MAPRE3Q9UPY8 281 aa17.12■□□□□ 0.33
CHTOP-202ENST00000368687 ZGRF1Q86YA3 2104 aa17.12■□□□□ 0.33
CHTOP-202ENST00000368687 LRRK2Q5S007 2527 aa17.12■□□□□ 0.33
CHTOP-202ENST00000368687 MYO1GB0I1T2 1018 aa17.11■□□□□ 0.33
CHTOP-202ENST00000368687 PLOD3O60568 738 aa17.11■□□□□ 0.33
CHTOP-202ENST00000368687 COQ9O75208 318 aa17.11■□□□□ 0.33
CHTOP-202ENST00000368687 LYPLA1O75608 230 aaPredicted RBP17.11■□□□□ 0.33
CHTOP-202ENST00000368687 CLPSP04118 112 aa17.11■□□□□ 0.33
CHTOP-202ENST00000368687 FBXO45P0C2W1 286 aa17.11■□□□□ 0.33
CHTOP-202ENST00000368687 CT62P0C5K7 136 aa17.11■□□□□ 0.33
CHTOP-202ENST00000368687 PRPS2P11908 318 aa17.11■□□□□ 0.33
CHTOP-202ENST00000368687 H2AFXP16104 143 aaPredicted RBP17.11■□□□□ 0.33
CHTOP-202ENST00000368687 ZNF24P17028 368 aa17.11■□□□□ 0.33
CHTOP-202ENST00000368687 SDC1P18827 310 aa17.11■□□□□ 0.33
CHTOP-202ENST00000368687 S1PR1P21453 382 aa17.11■□□□□ 0.33
CHTOP-202ENST00000368687 BGNP21810 368 aa17.11■□□□□ 0.33
CHTOP-202ENST00000368687 HPCAL1P37235 193 aa17.11■□□□□ 0.33
CHTOP-202ENST00000368687 ALDH6A1Q02252 535 aaKnown RBP17.11■□□□□ 0.33
CHTOP-202ENST00000368687 RBPJQ06330 500 aa17.11■□□□□ 0.33
CHTOP-202ENST00000368687 ZNF750Q32MQ0 723 aa17.11■□□□□ 0.33
CHTOP-202ENST00000368687 ZNF628Q5EBL2 1059 aa17.11■□□□□ 0.33
CHTOP-202ENST00000368687 RGS9BPQ6ZS82 235 aa17.11■□□□□ 0.33
CHTOP-202ENST00000368687 GK5Q6ZS86 529 aa17.11■□□□□ 0.33
CHTOP-202ENST00000368687 NATD1Q8N6N6 113 aa17.11■□□□□ 0.33
CHTOP-202ENST00000368687 C16orf52Q8NHV5 167 aa17.11■□□□□ 0.33
CHTOP-202ENST00000368687 ZFP28Q8NHY6 868 aa17.11■□□□□ 0.33
CHTOP-202ENST00000368687 TUBGCP3Q96CW5 907 aa17.11■□□□□ 0.33
CHTOP-202ENST00000368687 REEP4Q9H6H4 257 aa17.11■□□□□ 0.33
CHTOP-202ENST00000368687 LIN28AQ9H9Z2 209 aaKnown RBP17.11■□□□□ 0.33
CHTOP-202ENST00000368687 SACM1LQ9NTJ5 587 aa17.11■□□□□ 0.33
CHTOP-202ENST00000368687 THAP1Q9NVV9 213 aa17.11■□□□□ 0.33
CHTOP-202ENST00000368687 CNIH4Q9P003 139 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms