RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 AQP11Q8NBQ7 271 aa11.56□□□□□ -0.56
PCF11-201ENST00000298281 AURKBQ96GD4 344 aaPredicted RBP11.56□□□□□ -0.56
PCF11-201ENST00000298281 HS6ST2Q96MM7 605 aa11.56□□□□□ -0.56
PCF11-201ENST00000298281 RNASE10Q5GAN6 216 aaKnown RBP11.56□□□□□ -0.56
PCF11-201ENST00000298281 RPL13AP3Q6NVV1 102 aa11.56□□□□□ -0.56
PCF11-201ENST00000298281 WDR53Q7Z5U6 358 aaPredicted RBP11.56□□□□□ -0.56
PCF11-201ENST00000298281 C1orf52Q8N6N3 182 aaKnown RBP11.56□□□□□ -0.56
PCF11-201ENST00000298281 CCDC71LQ8N9Z2 235 aa11.56□□□□□ -0.56
PCF11-201ENST00000298281 PYURFQ96I23 114 aa11.56□□□□□ -0.56
PCF11-201ENST00000298281 ATF6BQ99941 703 aa11.56□□□□□ -0.56
PCF11-201ENST00000298281 MRI1Q9BV20 369 aa11.56□□□□□ -0.56
PCF11-201ENST00000298281 AKTIPQ9H8T0 292 aa11.56□□□□□ -0.56
PCF11-201ENST00000298281 PRODH2Q9UF12 536 aa11.56□□□□□ -0.56
PCF11-201ENST00000298281 GPR160Q9UJ42 338 aa11.56□□□□□ -0.56
PCF11-201ENST00000298281 CMAHPQ9Y471 501 aa11.56□□□□□ -0.56
PCF11-201ENST00000298281 MAB21L2Q9Y586 359 aa11.56□□□□□ -0.56
PCF11-201ENST00000298281 TGM5O43548 720 aa11.56□□□□□ -0.56
PCF11-201ENST00000298281 HLA-DQB2P05538 268 aa11.56□□□□□ -0.56
PCF11-201ENST00000298281 RPS24P62847 133 aaKnown RBP11.56□□□□□ -0.56
PCF11-201ENST00000298281 ACSM3Q53FZ2 586 aa11.56□□□□□ -0.56
PCF11-201ENST00000298281 TMEM198Q66K66 360 aa11.56□□□□□ -0.56
PCF11-201ENST00000298281 THOC6Q86W42 341 aaKnown RBP11.56□□□□□ -0.56
PCF11-201ENST00000298281 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.56□□□□□ -0.56
PCF11-201ENST00000298281 OR51Q1Q8NH59 317 aa11.56□□□□□ -0.56
PCF11-201ENST00000298281 MITD1Q8WV92 249 aa11.56□□□□□ -0.56
PCF11-201ENST00000298281 RHBDF1Q96CC6 855 aa11.56□□□□□ -0.56
PCF11-201ENST00000298281 SMOC2Q9H3U7 446 aa11.56□□□□□ -0.56
PCF11-201ENST00000298281 CA14Q9ULX7 337 aa11.56□□□□□ -0.56
PCF11-201ENST00000298281 YIPF1Q9Y548 306 aa11.56□□□□□ -0.56
PCF11-201ENST00000298281 POP7O75817 140 aaKnown RBP11.56□□□□□ -0.56
PCF11-201ENST00000298281 ADH1BP00325 375 aa11.56□□□□□ -0.56
PCF11-201ENST00000298281 AK4P27144 223 aaPredicted RBP11.56□□□□□ -0.56
PCF11-201ENST00000298281 PTGER4P35408 488 aa11.56□□□□□ -0.56
PCF11-201ENST00000298281 MEDAGQ5VYS4 303 aa11.56□□□□□ -0.56
PCF11-201ENST00000298281 NAT8LQ8N9F0 302 aa11.56□□□□□ -0.56
PCF11-201ENST00000298281 ZNRF4Q8WWF5 429 aa11.56□□□□□ -0.56
PCF11-201ENST00000298281 MRPL38Q96DV4 380 aaKnown RBP11.56□□□□□ -0.56
PCF11-201ENST00000298281 THOC3Q96J01 351 aaKnown RBP11.56□□□□□ -0.56
PCF11-201ENST00000298281 DEFB126Q9BYW3 111 aa11.56□□□□□ -0.56
PCF11-201ENST00000298281 FAM234AQ9H0X4 552 aa11.56□□□□□ -0.56
PCF11-201ENST00000298281 ZBTB26Q9HCK0 441 aa11.56□□□□□ -0.56
PCF11-201ENST00000298281 FAM86C1Q9NVL1 165 aa11.56□□□□□ -0.56
PCF11-201ENST00000298281 A0A1W2PP18 115 aa11.55□□□□□ -0.56
PCF11-201ENST00000298281 CDRT1O95170 752 aa11.55□□□□□ -0.56
PCF11-201ENST00000298281 PAHP00439 452 aa11.55□□□□□ -0.56
PCF11-201ENST00000298281 EPOP01588 193 aa11.55□□□□□ -0.56
PCF11-201ENST00000298281 TIMP2P16035 220 aa11.55□□□□□ -0.56
PCF11-201ENST00000298281 ANKDD1AQ495B1 522 aa11.55□□□□□ -0.56
PCF11-201ENST00000298281 PRRT3Q5FWE3 981 aa11.55□□□□□ -0.56
PCF11-201ENST00000298281 AWAT2Q6E213 333 aa11.55□□□□□ -0.56
PCF11-201ENST00000298281 PXKQ7Z7A4 578 aa11.55□□□□□ -0.56
PCF11-201ENST00000298281 CMTM1Q8IZ96 169 aa11.55□□□□□ -0.56
PCF11-201ENST00000298281 IRF7Q92985 503 aa11.55□□□□□ -0.56
PCF11-201ENST00000298281 RAB39BQ96DA2 213 aa11.55□□□□□ -0.56
PCF11-201ENST00000298281 RDH12Q96NR8 316 aa11.55□□□□□ -0.56
PCF11-201ENST00000298281 DERL2Q9GZP9 239 aa11.55□□□□□ -0.56
PCF11-201ENST00000298281 IGLV3-22A0A075B6J6 115 aa11.55□□□□□ -0.56
PCF11-201ENST00000298281 A8MVM7 634 aa11.55□□□□□ -0.56
PCF11-201ENST00000298281 RPS17P08708 135 aaKnown RBP11.55□□□□□ -0.56
PCF11-201ENST00000298281 PNMTP11086 282 aa11.55□□□□□ -0.56
PCF11-201ENST00000298281 Q1RN00 199 aa11.55□□□□□ -0.56
PCF11-201ENST00000298281 SIRPB2Q5JXA9 342 aa11.55□□□□□ -0.56
PCF11-201ENST00000298281 KIAA1614Q5VZ46 1190 aa11.55□□□□□ -0.56
PCF11-201ENST00000298281 GSG1LQ6UXU4 331 aa11.55□□□□□ -0.56
PCF11-201ENST00000298281 TMEM173Q86WV6 379 aaPredicted RBP11.55□□□□□ -0.56
PCF11-201ENST00000298281 GID4Q8IVV7 300 aa11.55□□□□□ -0.56
PCF11-201ENST00000298281 OR14L1PQ8NHC6 308 aa11.55□□□□□ -0.56
PCF11-201ENST00000298281 ARNT2Q9HBZ2 717 aa11.55□□□□□ -0.56
PCF11-201ENST00000298281 SLAMF7Q9NQ25 335 aa11.55□□□□□ -0.56
PCF11-201ENST00000298281 TAS2R9Q9NYW1 312 aa11.55□□□□□ -0.56
PCF11-201ENST00000298281 MGAT4BQ9UQ53 548 aa11.55□□□□□ -0.56
PCF11-201ENST00000298281 PLIN4Q96Q06 1357 aa11.55□□□□□ -0.56
PCF11-201ENST00000298281 PRSS51A0A1B0GVH4 220 aa11.55□□□□□ -0.56
PCF11-201ENST00000298281 A0A1W2PPW3 197 aa11.55□□□□□ -0.56
PCF11-201ENST00000298281 FAM170BA6NMN3 283 aa11.55□□□□□ -0.56
PCF11-201ENST00000298281 NRP1O14786 923 aa11.55□□□□□ -0.56
PCF11-201ENST00000298281 PFKMP08237 780 aa11.55□□□□□ -0.56
PCF11-201ENST00000298281 CHRNB2P17787 502 aa11.55□□□□□ -0.56
PCF11-201ENST00000298281 GSK3AP49840 483 aa11.55□□□□□ -0.56
PCF11-201ENST00000298281 CHRNA6Q15825 494 aa11.55□□□□□ -0.56
PCF11-201ENST00000298281 TRMT10BQ6PF06 316 aaKnown RBP11.55□□□□□ -0.56
PCF11-201ENST00000298281 SLC35B2Q8TB61 432 aa11.55□□□□□ -0.56
PCF11-201ENST00000298281 SLC5A11Q8WWX8 675 aa11.55□□□□□ -0.56
PCF11-201ENST00000298281 SNX18Q96RF0 628 aa11.55□□□□□ -0.56
PCF11-201ENST00000298281 DECR2Q9NUI1 292 aa11.55□□□□□ -0.56
PCF11-201ENST00000298281 WASH4PA8MWX3 477 aa11.55□□□□□ -0.56
PCF11-201ENST00000298281 ARAFP10398 606 aa11.55□□□□□ -0.56
PCF11-201ENST00000298281 CDKN2CP42773 168 aa11.55□□□□□ -0.56
PCF11-201ENST00000298281 MAGEB1P43366 347 aa11.55□□□□□ -0.56
PCF11-201ENST00000298281 TAP2Q03519 686 aa11.55□□□□□ -0.56
PCF11-201ENST00000298281 KCNC4Q03721 635 aa11.55□□□□□ -0.56
PCF11-201ENST00000298281 NPRL3Q12980 569 aa11.55□□□□□ -0.56
PCF11-201ENST00000298281 ABHD17BQ5VST6 288 aa11.55□□□□□ -0.56
PCF11-201ENST00000298281 PIAS4Q8N2W9 510 aaPredicted RBP11.55□□□□□ -0.56
PCF11-201ENST00000298281 CHCHD4Q8N4Q1 142 aa11.55□□□□□ -0.56
PCF11-201ENST00000298281 MROQ9BYG7 248 aa11.55□□□□□ -0.56
PCF11-201ENST00000298281 PPP1R11O60927 126 aaPredicted RBP11.55□□□□□ -0.56
PCF11-201ENST00000298281 SOCS5O75159 536 aa11.55□□□□□ -0.56
PCF11-201ENST00000298281 GBX1Q14549 363 aa11.55□□□□□ -0.56
PCF11-201ENST00000298281 TRAM2Q15035 370 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms