RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507	STT3A	P46977	705 aa		11.81	□□□□□ -0.52
FDPS-204	ENST00000461507	MLF1	P58340	268 aa		11.81	□□□□□ -0.52
FDPS-204	ENST00000461507	ART3	Q13508	389 aa		11.81	□□□□□ -0.52
FDPS-204	ENST00000461507	ZNF267	Q14586	743 aa	Predicted RBP	11.81	□□□□□ -0.52
FDPS-204	ENST00000461507	MTFR2	Q6P444	385 aa		11.81	□□□□□ -0.52
FDPS-204	ENST00000461507	RPTN	Q6XPR3	784 aa		11.81	□□□□□ -0.52
FDPS-204	ENST00000461507		Q6ZPB1	254 aa	Predicted RBP	11.81	□□□□□ -0.52
FDPS-204	ENST00000461507	RPS19BP1	Q86WX3	136 aa	Known RBP	11.81	□□□□□ -0.52
FDPS-204	ENST00000461507	ZNF227	Q86WZ6	799 aa		11.81	□□□□□ -0.52
FDPS-204	ENST00000461507	OR4K14	Q8NGD5	310 aa		11.81	□□□□□ -0.52
FDPS-204	ENST00000461507	CHTF18	Q8WVB6	975 aa		11.81	□□□□□ -0.52
FDPS-204	ENST00000461507	TWIST2	Q8WVJ9	160 aa		11.81	□□□□□ -0.52
FDPS-204	ENST00000461507	EXOSC8	Q96B26	276 aa	Known RBP	11.81	□□□□□ -0.52
FDPS-204	ENST00000461507	CCDC120	Q96HB5	630 aa		11.81	□□□□□ -0.52
FDPS-204	ENST00000461507	ART5	Q96L15	291 aa		11.81	□□□□□ -0.52
FDPS-204	ENST00000461507	GPR137	Q96N19	417 aa		11.81	□□□□□ -0.52
FDPS-204	ENST00000461507	PELO	Q9BRX2	385 aa	Known RBP	11.81	□□□□□ -0.52
FDPS-204	ENST00000461507	HES7	Q9BYE0	225 aa		11.81	□□□□□ -0.52
FDPS-204	ENST00000461507	BRINP2	Q9C0B6	783 aa		11.81	□□□□□ -0.52
FDPS-204	ENST00000461507	LIN28A	Q9H9Z2	209 aa	Known RBP	11.81	□□□□□ -0.52
FDPS-204	ENST00000461507	TMBIM4	Q9HC24	238 aa		11.81	□□□□□ -0.52
FDPS-204	ENST00000461507	VTI1B	Q9UEU0	232 aa		11.81	□□□□□ -0.52
FDPS-204	ENST00000461507	DLGAP4	Q9Y2H0	992 aa		11.81	□□□□□ -0.52
FDPS-204	ENST00000461507	TRAF6	Q9Y4K3	522 aa		11.81	□□□□□ -0.52
FDPS-204	ENST00000461507	C1orf226	A1L170	272 aa		11.8	□□□□□ -0.52
FDPS-204	ENST00000461507	PIP5K1B	O14986	540 aa		11.8	□□□□□ -0.52
FDPS-204	ENST00000461507	HNRNPR	O43390	633 aa	Known RBP	11.8	□□□□□ -0.52
FDPS-204	ENST00000461507	NME2P1	O60361	137 aa		11.8	□□□□□ -0.52
FDPS-204	ENST00000461507	SLC19A2	O60779	497 aa		11.8	□□□□□ -0.52
FDPS-204	ENST00000461507	RSL1D1	O76021	490 aa	Known RBP	11.8	□□□□□ -0.52
FDPS-204	ENST00000461507	WISP2	O76076	250 aa		11.8	□□□□□ -0.52
FDPS-204	ENST00000461507	ZFAND5	O76080	213 aa		11.8	□□□□□ -0.52
FDPS-204	ENST00000461507	SERPINE1	P05121	402 aa		11.8	□□□□□ -0.52
FDPS-204	ENST00000461507	SP1	P08047	785 aa		11.8	□□□□□ -0.52
FDPS-204	ENST00000461507	NME2	P22392	152 aa		11.8	□□□□□ -0.52
FDPS-204	ENST00000461507	SERPINB5	P36952	375 aa		11.8	□□□□□ -0.52
FDPS-204	ENST00000461507	FEN1	P39748	380 aa	Known RBP	11.8	□□□□□ -0.52
FDPS-204	ENST00000461507	ETV4	P43268	484 aa		11.8	□□□□□ -0.52
FDPS-204	ENST00000461507	ERVK-8	P63133	956 aa		11.8	□□□□□ -0.52
FDPS-204	ENST00000461507	RPL38	P63173	70 aa	Known RBP	11.8	□□□□□ -0.52
FDPS-204	ENST00000461507	RBPJ	Q06330	500 aa		11.8	□□□□□ -0.52
FDPS-204	ENST00000461507	ZNF763	Q0D2J5	394 aa		11.8	□□□□□ -0.52
FDPS-204	ENST00000461507	ZNF750	Q32MQ0	723 aa		11.8	□□□□□ -0.52
FDPS-204	ENST00000461507	KRTCAP3	Q53RY4	240 aa		11.8	□□□□□ -0.52
FDPS-204	ENST00000461507	ZNF468	Q5VIY5	522 aa	Predicted RBP	11.8	□□□□□ -0.52
FDPS-204	ENST00000461507	KANK2	Q63ZY3	851 aa		11.8	□□□□□ -0.52
FDPS-204	ENST00000461507	SPINK14	Q6IE38	97 aa		11.8	□□□□□ -0.52
FDPS-204	ENST00000461507	FAM180B	Q6P0A1	224 aa		11.8	□□□□□ -0.52
FDPS-204	ENST00000461507	HSDL2	Q6YN16	418 aa		11.8	□□□□□ -0.52
FDPS-204	ENST00000461507	HDX	Q7Z353	690 aa		11.8	□□□□□ -0.52
FDPS-204	ENST00000461507	ST13P4	Q8IZP2	240 aa	Predicted RBP	11.8	□□□□□ -0.52
FDPS-204	ENST00000461507	CLYBL	Q8N0X4	340 aa		11.8	□□□□□ -0.52
FDPS-204	ENST00000461507	ZNF808	Q8N4W9	903 aa	Predicted RBP	11.8	□□□□□ -0.52
FDPS-204	ENST00000461507	TMEM156	Q8N614	296 aa		11.8	□□□□□ -0.52
FDPS-204	ENST00000461507	HORMAD2	Q8N7B1	307 aa		11.8	□□□□□ -0.52
FDPS-204	ENST00000461507	ZNF321P	Q8N8H1	164 aa		11.8	□□□□□ -0.52
FDPS-204	ENST00000461507	APCDD1L	Q8NCL9	501 aa		11.8	□□□□□ -0.52
FDPS-204	ENST00000461507	MORN4	Q8NDC4	146 aa		11.8	□□□□□ -0.52
FDPS-204	ENST00000461507	C7orf57	Q8NEG2	295 aa		11.8	□□□□□ -0.52
FDPS-204	ENST00000461507	PTPMT1	Q8WUK0	201 aa	Predicted RBP	11.8	□□□□□ -0.52
FDPS-204	ENST00000461507	RIT1	Q92963	219 aa		11.8	□□□□□ -0.52
FDPS-204	ENST00000461507	TM4SF18	Q96CE8	201 aa		11.8	□□□□□ -0.52
FDPS-204	ENST00000461507	PPP1R36	Q96LQ0	422 aa		11.8	□□□□□ -0.52
FDPS-204	ENST00000461507	GAL3ST4	Q96RP7	486 aa		11.8	□□□□□ -0.52
FDPS-204	ENST00000461507	LRTM1	Q9HBL6	345 aa		11.8	□□□□□ -0.52
FDPS-204	ENST00000461507	MIEF1	Q9NQG6	463 aa		11.8	□□□□□ -0.52
FDPS-204	ENST00000461507	KLHL1	Q9NR64	748 aa		11.8	□□□□□ -0.52
FDPS-204	ENST00000461507	GIMAP4	Q9NUV9	329 aa		11.8	□□□□□ -0.52
FDPS-204	ENST00000461507	SUCO	Q9UBS9	1254 aa	Known RBP	11.8	□□□□□ -0.52
FDPS-204	ENST00000461507	UTS2R	Q9UKP6	389 aa		11.8	□□□□□ -0.52
FDPS-204	ENST00000461507	PSME2	Q9UL46	239 aa		11.8	□□□□□ -0.52
FDPS-204	ENST00000461507	ERVK-19	Q9WJR5	959 aa		11.8	□□□□□ -0.52
FDPS-204	ENST00000461507	PCDHA9	Q9Y5H5	950 aa		11.8	□□□□□ -0.52
FDPS-204	ENST00000461507	ZNF780B	Q9Y6R6	833 aa		11.8	□□□□□ -0.52
FDPS-204	ENST00000461507	PKDREJ	Q9NTG1	2253 aa		11.8	□□□□□ -0.52
FDPS-204	ENST00000461507	LRBA	P50851	2863 aa		11.8	□□□□□ -0.52
FDPS-204	ENST00000461507	TRGV8	A0A0C4DH27	118 aa		11.79	□□□□□ -0.52
FDPS-204	ENST00000461507		A0A1W2PS29	197 aa		11.79	□□□□□ -0.52
FDPS-204	ENST00000461507	WWP2	O00308	870 aa		11.79	□□□□□ -0.52
FDPS-204	ENST00000461507	BIRC5	O15392	142 aa		11.79	□□□□□ -0.52
FDPS-204	ENST00000461507	SLC25A12	O75746	678 aa		11.79	□□□□□ -0.52
FDPS-204	ENST00000461507	AGA	P20933	346 aa		11.79	□□□□□ -0.52
FDPS-204	ENST00000461507	PTGER1	P34995	402 aa		11.79	□□□□□ -0.52
FDPS-204	ENST00000461507	HLCS	P50747	726 aa		11.79	□□□□□ -0.52
FDPS-204	ENST00000461507	GPR143	P51810	404 aa		11.79	□□□□□ -0.52
FDPS-204	ENST00000461507	XK	P51811	444 aa		11.79	□□□□□ -0.52
FDPS-204	ENST00000461507	ABCE1	P61221	599 aa	Known RBP	11.79	□□□□□ -0.52
FDPS-204	ENST00000461507	TRA2B	P62995	288 aa	Known RBP	11.79	□□□□□ -0.52
FDPS-204	ENST00000461507	RAE1	P78406	368 aa	Known RBP	11.79	□□□□□ -0.52
FDPS-204	ENST00000461507	C2orf80	Q0P641	193 aa		11.79	□□□□□ -0.52
FDPS-204	ENST00000461507	STX3	Q13277	289 aa		11.79	□□□□□ -0.52
FDPS-204	ENST00000461507	HEPACAM	Q14CZ8	416 aa		11.79	□□□□□ -0.52
FDPS-204	ENST00000461507	PDCD2	Q16342	344 aa	Predicted RBP	11.79	□□□□□ -0.52
FDPS-204	ENST00000461507	SLC25A25	Q6KCM7	469 aa		11.79	□□□□□ -0.52
FDPS-204	ENST00000461507	SLC48A1	Q6P1K1	146 aa		11.79	□□□□□ -0.52
FDPS-204	ENST00000461507	BNC2	Q6ZN30	1099 aa	Predicted RBP	11.79	□□□□□ -0.52
FDPS-204	ENST00000461507	RNF111	Q6ZNA4	994 aa		11.79	□□□□□ -0.52
FDPS-204	ENST00000461507	GALNTL5	Q7Z4T8	443 aa		11.79	□□□□□ -0.52
FDPS-204	ENST00000461507	CHERP	Q8IWX8	916 aa	Known RBP	11.79	□□□□□ -0.52
FDPS-204	ENST00000461507	GALNT12	Q8IXK2	581 aa		11.79	□□□□□ -0.52

Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms