RNA–Protein interactions for RNA: YPR028W

YOP1, Transcript of Membrane protein that interacts with Yip1p to mediate membrane traffic, yeastyeast

Gene YOP1, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YOP1YPR028W WHI5Q12416 295 aa3.44□□□□□ -1.86
YOP1YPR028W MCM7P38132 845 aa3.43□□□□□ -1.86
YOP1YPR028W YGR122WP53272 402 aa3.43□□□□□ -1.86
YOP1YPR028W SEC5P89102 971 aa3.43□□□□□ -1.86
YOP1YPR028W WHI4Q07655 649 aaKnown RBP3.43□□□□□ -1.86
YOP1YPR028W TRM13Q12383 476 aa3.43□□□□□ -1.86
YOP1YPR028W TUB1P09733 447 aaKnown RBP3.42□□□□□ -1.86
YOP1YPR028W RIX1P38883 763 aaPredicted RBP3.42□□□□□ -1.86
YOP1YPR028W PNT1P38969 423 aa3.42□□□□□ -1.86
YOP1YPR028W GLO1P50107 326 aa3.42□□□□□ -1.86
YOP1YPR028W GFA1P14742 717 aaKnown RBP3.41□□□□□ -1.86
YOP1YPR028W SEC20P28791 383 aa3.41□□□□□ -1.86
YOP1YPR028W ECM21P38167 1117 aaKnown RBP3.41□□□□□ -1.86
YOP1YPR028W TIF35Q04067 274 aaKnown RBP3.41□□□□□ -1.86
YOP1YPR028W SPP382Q06411 708 aaPredicted RBP3.41□□□□□ -1.86
YOP1YPR028W RAD2P07276 1031 aa3.4□□□□□ -1.87
YOP1YPR028W TDP1P38319 544 aa3.4□□□□□ -1.87
YOP1YPR028W YHL017WP38745 532 aa3.39□□□□□ -1.87
YOP1YPR028W UPC2Q12151 913 aa3.39□□□□□ -1.87
YOP1YPR028W GCR1P07261 785 aa3.38□□□□□ -1.87
YOP1YPR028W ILV6P25605 309 aaKnown RBP3.38□□□□□ -1.87
YOP1YPR028W PPS1P38148 807 aa3.38□□□□□ -1.87
YOP1YPR028W RPS26AP39938 119 aaKnown RBP3.38□□□□□ -1.87
YOP1YPR028W RPS26BP39939 119 aaKnown RBP3.38□□□□□ -1.87
YOP1YPR028W CYC8P14922 966 aa3.37□□□□□ -1.87
YOP1YPR028W RAD27P26793 382 aa3.37□□□□□ -1.87
YOP1YPR028W RER2P35196 286 aa3.37□□□□□ -1.87
YOP1YPR028W FLO10P36170 1169 aa3.37□□□□□ -1.87
YOP1YPR028W DAS1P47005 663 aa3.37□□□□□ -1.87
YOP1YPR028W ERG5P54781 538 aa3.37□□□□□ -1.87
YOP1YPR028W THI7Q05998 598 aa3.37□□□□□ -1.87
YOP1YPR028W MDM38Q08179 573 aa3.37□□□□□ -1.87
YOP1YPR028W YLL058WQ12198 575 aa3.37□□□□□ -1.87
YOP1YPR028W HCA4P20448 770 aaKnown RBP3.36□□□□□ -1.87
YOP1YPR028W SED4P25365 1065 aa3.36□□□□□ -1.87
YOP1YPR028W FUN30P31380 1131 aa3.36□□□□□ -1.87
YOP1YPR028W IPL1P38991 367 aa3.36□□□□□ -1.87
YOP1YPR028W TAH11P47112 604 aa3.36□□□□□ -1.87
YOP1YPR028W SRT1Q03175 343 aa3.36□□□□□ -1.87
YOP1YPR028W FRE5Q08908 694 aa3.36□□□□□ -1.87
YOP1YPR028W YKL151CP36059 337 aa3.35□□□□□ -1.87
YOP1YPR028W VPS73P53142 486 aaKnown RBP3.35□□□□□ -1.87
YOP1YPR028W SLU7Q02775 382 aaKnown RBP3.35□□□□□ -1.87
YOP1YPR028W STE14P32584 239 aa3.34□□□□□ -1.87
YOP1YPR028W MGE1P38523 228 aa3.34□□□□□ -1.87
YOP1YPR028W GIC1P38785 314 aa3.34□□□□□ -1.87
YOP1YPR028W SCS3P53012 380 aa3.34□□□□□ -1.87
YOP1YPR028W ARO10Q06408 635 aa3.34□□□□□ -1.87
YOP1YPR028W HRQ1Q05549 1077 aa3.33□□□□□ -1.88
YOP1YPR028W CDC43P18898 376 aa3.32□□□□□ -1.88
YOP1YPR028W RTT10Q08924 1013 aa3.32□□□□□ -1.88
YOP1YPR028W MET6P05694 767 aaKnown RBP3.31□□□□□ -1.88
YOP1YPR028W MET3P08536 511 aa3.31□□□□□ -1.88
YOP1YPR028W SLD2P34252 453 aa3.31□□□□□ -1.88
YOP1YPR028W YIL166CP40445 542 aa3.31□□□□□ -1.88
YOP1YPR028W TMA46Q12000 345 aaKnown RBP3.31□□□□□ -1.88
YOP1YPR028W MCM2P29469 868 aa3.3□□□□□ -1.88
YOP1YPR028W ELO3P40319 345 aa3.3□□□□□ -1.88
YOP1YPR028W DLT1Q04216 342 aa3.3□□□□□ -1.88
YOP1YPR028W ADY4Q05955 493 aa3.3□□□□□ -1.88
YOP1YPR028W PEX19Q07418 342 aa3.3□□□□□ -1.88
YOP1YPR028W SPR28Q04921 423 aa3.29□□□□□ -1.88
YOP1YPR028W TAF7Q05021 590 aa3.29□□□□□ -1.88
YOP1YPR028W ESF1Q06344 628 aaKnown RBP3.29□□□□□ -1.88
YOP1YPR028W KIN3P22209 435 aa3.28□□□□□ -1.88
YOP1YPR028W ADY2P25613 283 aa3.28□□□□□ -1.88
YOP1YPR028W YUR1P26725 428 aa3.28□□□□□ -1.88
YOP1YPR028W RPC82P32349 654 aa3.28□□□□□ -1.88
YOP1YPR028W CTF13P35203 478 aa3.28□□□□□ -1.88
YOP1YPR028W POL32P47110 350 aa3.28□□□□□ -1.88
YOP1YPR028W SFB2P53953 876 aa3.28□□□□□ -1.88
YOP1YPR028W TRP2P00899 507 aaKnown RBP3.27□□□□□ -1.89
YOP1YPR028W INO1P11986 533 aa3.27□□□□□ -1.89
YOP1YPR028W LYP1P32487 611 aa3.27□□□□□ -1.89
YOP1YPR028W YKL107WP34251 309 aa3.27□□□□□ -1.89
YOP1YPR028W MOT2P34909 587 aaKnown RBP3.27□□□□□ -1.89
YOP1YPR028W NPP2P39997 493 aa3.27□□□□□ -1.89
YOP1YPR028W YPL066WQ12194 479 aa3.27□□□□□ -1.89
YOP1YPR028W RKM4Q12504 494 aa3.27□□□□□ -1.89
YOP1YPR028W CAF20P12962 161 aaKnown RBP3.26□□□□□ -1.89
YOP1YPR028W SEC21P32074 935 aaKnown RBP3.26□□□□□ -1.89
YOP1YPR028W PCL5P38794 229 aa3.26□□□□□ -1.89
YOP1YPR028W SNF7P39929 240 aaKnown RBP3.26□□□□□ -1.89
YOP1YPR028W SAH1P39954 449 aaKnown RBP3.26□□□□□ -1.89
YOP1YPR028W GAT1P43574 510 aa3.26□□□□□ -1.89
YOP1YPR028W YGL176CP46945 554 aa3.26□□□□□ -1.89
YOP1YPR028W RAI1P53063 387 aaKnown RBP3.26□□□□□ -1.89
YOP1YPR028W TYW3P53177 273 aa3.26□□□□□ -1.89
YOP1YPR028W FYV10P40492 516 aa3.25□□□□□ -1.89
YOP1YPR028W NAB6Q03735 1134 aaKnown RBP RIP-Chip data3.25□□□□□ -1.89not detected
YOP1YPR028W TRM11Q12463 433 aa3.25□□□□□ -1.89
YOP1YPR028W SEN54Q02825 467 aaPredicted RBP3.24□□□□□ -1.89
YOP1YPR028W YJR107WP47145 328 aa3.23□□□□□ -1.89
YOP1YPR028W PUS2P53167 370 aa3.23□□□□□ -1.89
YOP1YPR028W SPO20Q04359 397 aa3.23□□□□□ -1.89
YOP1YPR028W YPR196WQ06595 470 aa3.23□□□□□ -1.89
YOP1YPR028W ATE1P16639 503 aa3.22□□□□□ -1.89
YOP1YPR028W ORC2P32833 620 aa3.22□□□□□ -1.89
YOP1YPR028W MUP1P50276 574 aa3.22□□□□□ -1.89
YOP1YPR028W RIA1P53893 1110 aa3.22□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 45.1 ms