RNA–Protein interactions for RNA: YPL173W

MRPL40, Transcript of Mitochondrial ribosomal protein of the large subunit, yeast

Gene MRPL40, Length 894 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MRPL40	YPL173W	IRC10	Q08118	586 aa		4.22	□□□□□ -1.73
MRPL40	YPL173W	CDC34	P14682	295 aa		4.21	□□□□□ -1.74
MRPL40	YPL173W	YAP1801	P38856	637 aa		4.21	□□□□□ -1.74
MRPL40	YPL173W	FAA4	P47912	694 aa	Known RBP	4.21	□□□□□ -1.74
MRPL40	YPL173W	NCS6	P53088	359 aa		4.21	□□□□□ -1.74
MRPL40	YPL173W	OMS1	Q06668	471 aa		4.21	□□□□□ -1.74
MRPL40	YPL173W	CDA1	Q06702	301 aa		4.21	□□□□□ -1.74
MRPL40	YPL173W	THS1	P04801	734 aa	Known RBP	4.2	□□□□□ -1.74
MRPL40	YPL173W	SPE1	P08432	466 aa		4.2	□□□□□ -1.74
MRPL40	YPL173W	KAR4	P25583	335 aa		4.2	□□□□□ -1.74
MRPL40	YPL173W	YGR012W	P53206	393 aa		4.2	□□□□□ -1.74
MRPL40	YPL173W	TIF35	Q04067	274 aa	Known RBP	4.2	□□□□□ -1.74
MRPL40	YPL173W	GCR1	P07261	785 aa		4.19	□□□□□ -1.74
MRPL40	YPL173W	KTR4	P38131	464 aa		4.19	□□□□□ -1.74
MRPL40	YPL173W	PNT1	P38969	423 aa		4.19	□□□□□ -1.74
MRPL40	YPL173W	YGR053C	P53234	283 aa		4.19	□□□□□ -1.74
MRPL40	YPL173W	MCM7	P38132	845 aa		4.18	□□□□□ -1.74
MRPL40	YPL173W	URM1	P40554	99 aa	Predicted RBP	4.18	□□□□□ -1.74
MRPL40	YPL173W	YJL049W	P47048	450 aa		4.18	□□□□□ -1.74
MRPL40	YPL173W	CWC24	P53769	259 aa		4.18	□□□□□ -1.74
MRPL40	YPL173W	EEB1	Q02891	456 aa		4.18	□□□□□ -1.74
MRPL40	YPL173W	GDE1	Q02979	1223 aa		4.18	□□□□□ -1.74
MRPL40	YPL173W	NSE3	Q05541	303 aa		4.18	□□□□□ -1.74
MRPL40	YPL173W	RTT10	Q08924	1013 aa		4.18	□□□□□ -1.74
MRPL40	YPL173W	WRS1	Q12109	432 aa	Known RBP	4.18	□□□□□ -1.74
MRPL40	YPL173W	ACF2	Q12168	779 aa		4.18	□□□□□ -1.74
MRPL40	YPL173W	OSW2	Q12202	724 aa		4.18	□□□□□ -1.74
MRPL40	YPL173W	ERG4	P25340	473 aa		4.17	□□□□□ -1.74
MRPL40	YPL173W	RER2	P35196	286 aa		4.17	□□□□□ -1.74
MRPL40	YPL173W	DOS2	P54858	310 aa		4.17	□□□□□ -1.74
MRPL40	YPL173W	YMR206W	Q03695	313 aa		4.17	□□□□□ -1.74
MRPL40	YPL173W	GUP2	Q08929	609 aa		4.17	□□□□□ -1.74
MRPL40	YPL173W	CIT2	P08679	460 aa		4.16	□□□□□ -1.74
MRPL40	YPL173W	GRX1	P25373	110 aa	Known RBP	4.16	□□□□□ -1.74
MRPL40	YPL173W	SRP101	P32916	621 aa		4.16	□□□□□ -1.74
MRPL40	YPL173W	MTH1	P35198	433 aa		4.16	□□□□□ -1.74
MRPL40	YPL173W	YKL069W	P36088	180 aa		4.16	□□□□□ -1.74
MRPL40	YPL173W	SPC42	P36094	363 aa		4.16	□□□□□ -1.74
MRPL40	YPL173W	BUD6	P41697	788 aa		4.16	□□□□□ -1.74
MRPL40	YPL173W	OPI10	Q08202	246 aa		4.16	□□□□□ -1.74
MRPL40	YPL173W	NDJ1	Q12366	352 aa		4.16	□□□□□ -1.74
MRPL40	YPL173W	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.15	□□□□□ -1.75	not detected
MRPL40	YPL173W	SRP40	P32583	406 aa	Predicted RBP	4.15	□□□□□ -1.75
MRPL40	YPL173W	NMD2	P38798	1089 aa	Known RBP	4.15	□□□□□ -1.75
MRPL40	YPL173W	CCC2	P38995	1004 aa		4.15	□□□□□ -1.75
MRPL40	YPL173W	SPF1	P39986	1215 aa	Known RBP	4.15	□□□□□ -1.75
MRPL40	YPL173W	TIM44	Q01852	431 aa		4.15	□□□□□ -1.75
MRPL40	YPL173W	MUK1	Q02866	612 aa		4.15	□□□□□ -1.75
MRPL40	YPL173W	RPN4	Q03465	531 aa		4.15	□□□□□ -1.75
MRPL40	YPL173W	PRI2	P20457	528 aa		4.14	□□□□□ -1.75
MRPL40	YPL173W	YKL091C	P33324	310 aa	Known RBP	4.14	□□□□□ -1.75
MRPL40	YPL173W	BRN1	P38170	754 aa		4.14	□□□□□ -1.75
MRPL40	YPL173W	PSP2	P50109	593 aa	Known RBP	4.14	□□□□□ -1.75
MRPL40	YPL173W	GND2	P53319	492 aa		4.14	□□□□□ -1.75
MRPL40	YPL173W	RNH70	P53331	553 aa		4.14	□□□□□ -1.75
MRPL40	YPL173W	IOC4	Q04213	475 aa		4.14	□□□□□ -1.75
MRPL40	YPL173W	SPP382	Q06411	708 aa	Predicted RBP	4.14	□□□□□ -1.75
MRPL40	YPL173W	WHI4	Q07655	649 aa	Known RBP	4.14	□□□□□ -1.75
MRPL40	YPL173W	TRP4	P07285	380 aa	Predicted RBP	4.13	□□□□□ -1.75
MRPL40	YPL173W	HSF1	P10961	833 aa		4.13	□□□□□ -1.75
MRPL40	YPL173W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.13	□□□□□ -1.75	not detected
MRPL40	YPL173W	ECM21	P38167	1117 aa	Known RBP	4.13	□□□□□ -1.75
MRPL40	YPL173W	TDA5	Q06417	326 aa	Known RBP	4.13	□□□□□ -1.75
MRPL40	YPL173W	RAD4	P14736	754 aa		4.12	□□□□□ -1.75
MRPL40	YPL173W	CAD1	P24813	409 aa	Known RBP	4.12	□□□□□ -1.75
MRPL40	YPL173W	YKL151C	P36059	337 aa		4.12	□□□□□ -1.75
MRPL40	YPL173W	YER158C	P40095	573 aa		4.12	□□□□□ -1.75
MRPL40	YPL173W	HUL5	P53119	910 aa		4.12	□□□□□ -1.75
MRPL40	YPL173W	RNT1	Q02555	471 aa		4.12	□□□□□ -1.75
MRPL40	YPL173W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.12	□□□□□ -1.75	not detected
MRPL40	YPL173W	MDM38	Q08179	573 aa		4.12	□□□□□ -1.75
MRPL40	YPL173W	TMA46	Q12000	345 aa	Known RBP	4.12	□□□□□ -1.75
MRPL40	YPL173W	CDC53	Q12018	815 aa	Known RBP	4.12	□□□□□ -1.75
MRPL40	YPL173W	TRP2	P00899	507 aa	Known RBP	4.11	□□□□□ -1.75
MRPL40	YPL173W	STE5	P32917	917 aa		4.11	□□□□□ -1.75
MRPL40	YPL173W	ATG19	P35193	415 aa		4.11	□□□□□ -1.75
MRPL40	YPL173W	YHR020W	P38708	688 aa	Known RBP	4.11	□□□□□ -1.75
MRPL40	YPL173W	ALG12	P53730	551 aa		4.11	□□□□□ -1.75
MRPL40	YPL173W	NAN1	Q02931	896 aa	Known RBP	4.11	□□□□□ -1.75
MRPL40	YPL173W	ESC2	Q06340	456 aa		4.11	□□□□□ -1.75
MRPL40	YPL173W	FAL1	Q12099	399 aa	Known RBP	4.11	□□□□□ -1.75
MRPL40	YPL173W	YLL058W	Q12198	575 aa		4.11	□□□□□ -1.75
MRPL40	YPL173W	TRM13	Q12383	476 aa		4.11	□□□□□ -1.75
MRPL40	YPL173W	PPR1	P07272	904 aa	Predicted RBP	4.1	□□□□□ -1.75
MRPL40	YPL173W	RRP14	P36080	434 aa	Known RBP	4.1	□□□□□ -1.75
MRPL40	YPL173W	TYW3	P53177	273 aa		4.1	□□□□□ -1.75
MRPL40	YPL173W	SRT1	Q03175	343 aa		4.1	□□□□□ -1.75
MRPL40	YPL173W	HRQ1	Q05549	1077 aa		4.1	□□□□□ -1.75
MRPL40	YPL173W	UPC2	Q12151	913 aa		4.1	□□□□□ -1.75
MRPL40	YPL173W	AGP1	P25376	633 aa		4.09	□□□□□ -1.75
MRPL40	YPL173W	FUN30	P31380	1131 aa		4.09	□□□□□ -1.75
MRPL40	YPL173W	LYP1	P32487	611 aa		4.09	□□□□□ -1.75
MRPL40	YPL173W	GIC1	P38785	314 aa		4.09	□□□□□ -1.75
MRPL40	YPL173W	YPL066W	Q12194	479 aa		4.09	□□□□□ -1.75
MRPL40	YPL173W	ALG7	P07286	448 aa		4.08	□□□□□ -1.76
MRPL40	YPL173W	RAD27	P26793	382 aa		4.08	□□□□□ -1.76
MRPL40	YPL173W	ABD1	P32783	436 aa	Predicted RBP	4.08	□□□□□ -1.76
MRPL40	YPL173W	PPG1	P32838	368 aa		4.08	□□□□□ -1.76
MRPL40	YPL173W	OSW7	P43611	510 aa		4.08	□□□□□ -1.76
MRPL40	YPL173W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 9.9 ms