RNA–Protein interactions for RNA: YOR341W

RPA190, Transcript of RNA polymerase I largest subunit A190, yeastyeast

Gene RPA190, Length 4,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPA190YOR341W CCL1P37366 393 aa3.32□□□□□ -1.88
RPA190YOR341W BTT1P40314 149 aaPredicted RBP3.32□□□□□ -1.88
RPA190YOR341W FYV8P46949 817 aaKnown RBP3.32□□□□□ -1.88
RPA190YOR341W CCM1P48237 864 aaPredicted RBP3.32□□□□□ -1.88
RPA190YOR341W MTC3P53077 123 aa3.32□□□□□ -1.88
RPA190YOR341W TLG2Q08144 397 aa3.32□□□□□ -1.88
RPA190YOR341W DAP1Q12091 152 aa3.32□□□□□ -1.88
RPA190YOR341W RAD3P06839 778 aa3.32□□□□□ -1.88
RPA190YOR341W PHO8P11491 566 aa3.32□□□□□ -1.88
RPA190YOR341W MIP1P15801 1254 aa3.32□□□□□ -1.88
RPA190YOR341W MAK31P23059 88 aa3.32□□□□□ -1.88
RPA190YOR341W PMI40P29952 429 aaKnown RBP3.32□□□□□ -1.88
RPA190YOR341W SWC3P31376 625 aa3.32□□□□□ -1.88
RPA190YOR341W SPC72P39723 622 aa3.32□□□□□ -1.88
RPA190YOR341W EFM6P53970 246 aa3.32□□□□□ -1.88
RPA190YOR341W CEF1Q03654 590 aaPredicted RBP3.32□□□□□ -1.88
RPA190YOR341W REC8Q12188 680 aa3.32□□□□□ -1.88
RPA190YOR341W JIP3O13555 125 aa3.32□□□□□ -1.88
RPA190YOR341W SUI2P20459 304 aaKnown RBP3.32□□□□□ -1.88
RPA190YOR341W YDJ1P25491 409 aaKnown RBP3.32□□□□□ -1.88
RPA190YOR341W POA1P38218 177 aa3.32□□□□□ -1.88
RPA190YOR341W PHO88P38264 188 aaPredicted RBP3.32□□□□□ -1.88
RPA190YOR341W SSP1P38871 571 aa3.32□□□□□ -1.88
RPA190YOR341W FCP1Q03254 732 aa3.32□□□□□ -1.88
RPA190YOR341W YOR296WQ08748 1289 aa3.32□□□□□ -1.88
RPA190YOR341W BET2P20133 325 aa3.31□□□□□ -1.88
RPA190YOR341W SGF29P25554 259 aa3.31□□□□□ -1.88
RPA190YOR341W NUT1P53114 1132 aa3.31□□□□□ -1.88
RPA190YOR341W TSR1Q07381 788 aaKnown RBP3.31□□□□□ -1.88
RPA190YOR341W MRPL40P36534 297 aa3.31□□□□□ -1.88
RPA190YOR341W NOP4P37838 685 aaKnown RBP3.31□□□□□ -1.88
RPA190YOR341W GRX7P38068 203 aa3.31□□□□□ -1.88
RPA190YOR341W UTP14Q04500 899 aaKnown RBP3.31□□□□□ -1.88
RPA190YOR341W RRP6Q12149 733 aaKnown RBP3.31□□□□□ -1.88
RPA190YOR341W PAT1P25644 796 aaKnown RBP3.31□□□□□ -1.88
RPA190YOR341W SAC6P32599 642 aaKnown RBP3.31□□□□□ -1.88
RPA190YOR341W COY1P34237 679 aa3.31□□□□□ -1.88
RPA190YOR341W ATG12P38316 186 aa3.31□□□□□ -1.88
RPA190YOR341W SUL1P38359 859 aa3.31□□□□□ -1.88
RPA190YOR341W TFG2P41896 400 aaPredicted RBP3.31□□□□□ -1.88
RPA190YOR341W YJL171CP46992 396 aa3.31□□□□□ -1.88
RPA190YOR341W AIM23P47015 356 aa3.31□□□□□ -1.88
RPA190YOR341W CUS1Q02554 436 aaPredicted RBP3.31□□□□□ -1.88
RPA190YOR341W MCD1Q12158 566 aa3.31□□□□□ -1.88
RPA190YOR341W ATG11Q12527 1178 aa3.31□□□□□ -1.88
RPA190YOR341W MDM35O60200 86 aa3.31□□□□□ -1.88
RPA190YOR341W APM3P38153 483 aa3.31□□□□□ -1.88
RPA190YOR341W TPO2P53283 614 aa3.31□□□□□ -1.88
RPA190YOR341W YNL247WP53852 767 aaKnown RBP3.31□□□□□ -1.88
RPA190YOR341W PRO2P54885 456 aaKnown RBP3.31□□□□□ -1.88
RPA190YOR341W INA17Q02888 182 aa3.31□□□□□ -1.88
RPA190YOR341W YML053CQ04978 212 aa3.31□□□□□ -1.88
RPA190YOR341W SKG3Q06315 1026 aa3.31□□□□□ -1.88
RPA190YOR341W ERP3Q12403 225 aa3.31□□□□□ -1.88
RPA190YOR341W MLP1Q02455 1875 aaKnown RBP3.31□□□□□ -1.88
RPA190YOR341W CLN3P13365 580 aa3.3□□□□□ -1.88
RPA190YOR341W HCA4P20448 770 aaKnown RBP3.3□□□□□ -1.88
RPA190YOR341W PDE1P22434 369 aa3.3□□□□□ -1.88
RPA190YOR341W POT1P27796 417 aaKnown RBP RIP-Chip data3.3□□□□□ -1.88not detected
RPA190YOR341W HSP78P33416 811 aa3.3□□□□□ -1.88
RPA190YOR341W PCF11P39081 626 aaPredicted RBP3.3□□□□□ -1.88
RPA190YOR341W YMR147WP40218 223 aaKnown RBP3.3□□□□□ -1.88
RPA190YOR341W FET5P43561 622 aa3.3□□□□□ -1.88
RPA190YOR341W CUR1Q06469 252 aa3.3□□□□□ -1.88
RPA190YOR341W EFG1Q3E705 233 aaKnown RBP3.3□□□□□ -1.88
RPA190YOR341W SAM1P10659 382 aaKnown RBP3.3□□□□□ -1.88
RPA190YOR341W HCM1P25364 564 aa3.3□□□□□ -1.88
RPA190YOR341W PGS1P25578 521 aa3.3□□□□□ -1.88
RPA190YOR341W MSH1P25846 959 aa3.3□□□□□ -1.88
RPA190YOR341W MLS1P30952 554 aa3.3□□□□□ -1.88
RPA190YOR341W PIN4P34217 668 aaKnown RBP RIP-Chip data3.3□□□□□ -1.88not detected
RPA190YOR341W YAP1801P38856 637 aa3.3□□□□□ -1.88
RPA190YOR341W CHS6P40955 746 aa3.3□□□□□ -1.88
RPA190YOR341W CPR6P53691 371 aaKnown RBP3.3□□□□□ -1.88
RPA190YOR341W MTD1Q02046 320 aaKnown RBP3.3□□□□□ -1.88
RPA190YOR341W STE20Q03497 939 aaKnown RBP3.3□□□□□ -1.88
RPA190YOR341W SPT15P13393 240 aaKnown RBP3.3□□□□□ -1.88
RPA190YOR341W APM2P38700 605 aa3.3□□□□□ -1.88
RPA190YOR341W SFB3P38810 929 aa3.3□□□□□ -1.88
RPA190YOR341W FMP10P40098 244 aa3.3□□□□□ -1.88
RPA190YOR341W SIP5P40210 489 aaKnown RBP3.3□□□□□ -1.88
RPA190YOR341W SEY1Q99287 776 aa3.3□□□□□ -1.88
RPA190YOR341W RSR1P13856 272 aa3.3□□□□□ -1.88
RPA190YOR341W ADE2P21264 571 aaKnown RBP3.3□□□□□ -1.88
RPA190YOR341W EFT1P32324 842 aaKnown RBP3.3□□□□□ -1.88
RPA190YOR341W COT1P32798 439 aa3.3□□□□□ -1.88
RPA190YOR341W RER2P35196 286 aa3.3□□□□□ -1.88
RPA190YOR341W MIC60P36112 540 aa3.3□□□□□ -1.88
RPA190YOR341W YHL041WP38730 149 aa3.3□□□□□ -1.88
RPA190YOR341W NEM1P38757 446 aa3.3□□□□□ -1.88
RPA190YOR341W PSY2P40164 858 aa3.3□□□□□ -1.88
RPA190YOR341W HRQ1Q05549 1077 aa3.3□□□□□ -1.88
RPA190YOR341W UTP13Q05946 817 aaKnown RBP3.3□□□□□ -1.88
RPA190YOR341W STB3Q12427 513 aa3.3□□□□□ -1.88
RPA190YOR341W BIK1P11709 440 aa3.29□□□□□ -1.88
RPA190YOR341W PTP1P25044 335 aa3.29□□□□□ -1.88
RPA190YOR341W TSA1P34760 196 aaKnown RBP3.29□□□□□ -1.88
RPA190YOR341W MNN11P46985 422 aaKnown RBP3.29□□□□□ -1.88
RPA190YOR341W PCL10P53124 433 aa3.29□□□□□ -1.88
RPA190YOR341W GPD1Q00055 391 aaKnown RBP3.29□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 21.3 ms