RNA–Protein interactions for RNA: YNR060W

FRE4, Transcript of Ferric reductase, yeast

Gene FRE4, Length 2,160 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FRE4	YNR060W	YTM1	Q12024	460 aa	Predicted RBP	4.06	□□□□□ -1.76
FRE4	YNR060W	SPT7	P35177	1332 aa		4.06	□□□□□ -1.76
FRE4	YNR060W	AEP2	P22136	580 aa		4.06	□□□□□ -1.76
FRE4	YNR060W	PRP19	P32523	503 aa	Known RBP	4.06	□□□□□ -1.76
FRE4	YNR060W	MCD4	P36051	919 aa		4.06	□□□□□ -1.76
FRE4	YNR060W	KTR4	P38131	464 aa		4.06	□□□□□ -1.76
FRE4	YNR060W	FET4	P40988	552 aa		4.06	□□□□□ -1.76
FRE4	YNR060W	GZF3	P42944	551 aa	Known RBP	4.06	□□□□□ -1.76
FRE4	YNR060W	TCB2	P48231	1178 aa		4.06	□□□□□ -1.76
FRE4	YNR060W	YGR283C	P53336	341 aa	Predicted RBP	4.06	□□□□□ -1.76
FRE4	YNR060W	YML131W	Q03102	365 aa		4.06	□□□□□ -1.76
FRE4	YNR060W	MLC2	Q06580	163 aa		4.06	□□□□□ -1.76
FRE4	YNR060W	YOL087C	Q99247	1116 aa		4.06	□□□□□ -1.76
FRE4	YNR060W	MSS18	P08593	268 aa		4.05	□□□□□ -1.76
FRE4	YNR060W	NPP1	P25353	742 aa		4.05	□□□□□ -1.76
FRE4	YNR060W	KCC4	P25389	1037 aa		4.05	□□□□□ -1.76
FRE4	YNR060W	DBF20	P32328	564 aa		4.05	□□□□□ -1.76
FRE4	YNR060W	HEM12	P32347	362 aa	Predicted RBP	4.05	□□□□□ -1.76
FRE4	YNR060W	AAR2	P32357	355 aa	Predicted RBP	4.05	□□□□□ -1.76
FRE4	YNR060W	RPT2	P40327	437 aa	Known RBP	4.05	□□□□□ -1.76
FRE4	YNR060W	UTP22	P53254	1237 aa	Predicted RBP	4.05	□□□□□ -1.76
FRE4	YNR060W	SOK2	P53438	785 aa	Predicted RBP	4.05	□□□□□ -1.76
FRE4	YNR060W	LCD1	Q04377	747 aa		4.05	□□□□□ -1.76
FRE4	YNR060W	MIH1	P23748	554 aa		4.04	□□□□□ -1.76
FRE4	YNR060W	SSH4	P32343	579 aa		4.04	□□□□□ -1.76
FRE4	YNR060W	MRS6	P32864	603 aa	Known RBP	4.04	□□□□□ -1.76
FRE4	YNR060W	ARL1	P38116	183 aa	Known RBP	4.04	□□□□□ -1.76
FRE4	YNR060W	TOK1	P40310	691 aa		4.04	□□□□□ -1.76
FRE4	YNR060W	MDM1	Q01846	1127 aa		4.04	□□□□□ -1.76
FRE4	YNR060W	ATP25	Q03153	612 aa		4.04	□□□□□ -1.76
FRE4	YNR060W	YDR338C	Q05497	695 aa		4.04	□□□□□ -1.76
FRE4	YNR060W	ATG33	Q06485	197 aa		4.04	□□□□□ -1.76
FRE4	YNR060W	RSC3	Q06639	885 aa		4.04	□□□□□ -1.76
FRE4	YNR060W	ERP4	Q12450	207 aa		4.04	□□□□□ -1.76
FRE4	YNR060W	YKL151C	P36059	337 aa		4.04	□□□□□ -1.76
FRE4	YNR060W	GIP2	P40036	548 aa		4.04	□□□□□ -1.76
FRE4	YNR060W	CCT5	P40413	562 aa	Known RBP	4.04	□□□□□ -1.76
FRE4	YNR060W	MNN11	P46985	422 aa	Known RBP	4.04	□□□□□ -1.76
FRE4	YNR060W	ECM9	Q02202	377 aa		4.04	□□□□□ -1.76
FRE4	YNR060W	DUS3	Q06053	668 aa	Known RBP	4.04	□□□□□ -1.76
FRE4	YNR060W	PSR2	Q07949	397 aa		4.04	□□□□□ -1.76
FRE4	YNR060W	RTP1	Q12751	981 aa		4.04	□□□□□ -1.76
FRE4	YNR060W	RPL11A	P0C0W9	174 aa	Known RBP	4.03	□□□□□ -1.76
FRE4	YNR060W	YER152C	P10356	443 aa		4.03	□□□□□ -1.76
FRE4	YNR060W	RET1	P22276	1149 aa	Known RBP	4.03	□□□□□ -1.76
FRE4	YNR060W	CDC12	P32468	407 aa	Known RBP	4.03	□□□□□ -1.76
FRE4	YNR060W	PTH2	P34222	208 aa		4.03	□□□□□ -1.76
FRE4	YNR060W	PGM2	P37012	569 aa	Known RBP	4.03	□□□□□ -1.76
FRE4	YNR060W	HIS6	P40545	261 aa		4.03	□□□□□ -1.76
FRE4	YNR060W	AIM14	P53109	570 aa		4.03	□□□□□ -1.76
FRE4	YNR060W	COG8	Q04632	607 aa		4.03	□□□□□ -1.76
FRE4	YNR060W	CIA1	Q05583	330 aa		4.03	□□□□□ -1.76
FRE4	YNR060W	SPP382	Q06411	708 aa	Predicted RBP	4.03	□□□□□ -1.76
FRE4	YNR060W	GUD1	Q07729	489 aa		4.03	□□□□□ -1.76
FRE4	YNR060W	SLP1	Q12232	587 aa		4.03	□□□□□ -1.76
FRE4	YNR060W	RPL11B	Q3E757	174 aa	Predicted RBP	4.03	□□□□□ -1.76
FRE4	YNR060W	HMG1	P12683	1054 aa		4.03	□□□□□ -1.76
FRE4	YNR060W	BIT2	P38346	545 aa		4.03	□□□□□ -1.76
FRE4	YNR060W	TED1	P40533	473 aa		4.03	□□□□□ -1.76
FRE4	YNR060W	LEM3	P42838	414 aa		4.03	□□□□□ -1.76
FRE4	YNR060W	SPO74	P45819	413 aa		4.03	□□□□□ -1.76
FRE4	YNR060W	NPY1	P53164	384 aa		4.03	□□□□□ -1.76
FRE4	YNR060W	PHM6	Q05637	104 aa		4.03	□□□□□ -1.76
FRE4	YNR060W	SSP2	Q08646	371 aa		4.03	□□□□□ -1.76
FRE4	YNR060W	DPH6	Q12429	685 aa		4.03	□□□□□ -1.76
FRE4	YNR060W	TY4B-P	A0A0B7P3V8	1104 aa		4.02	□□□□□ -1.77
FRE4	YNR060W	HOG1	P32485	435 aa		4.02	□□□□□ -1.77
FRE4	YNR060W	STO1	P34160	861 aa	Known RBP	4.02	□□□□□ -1.77
FRE4	YNR060W	YKL133C	P36066	463 aa		4.02	□□□□□ -1.77
FRE4	YNR060W	RIM4	P38741	713 aa		4.02	□□□□□ -1.77
FRE4	YNR060W	ACA1	P39970	489 aa		4.02	□□□□□ -1.77
FRE4	YNR060W	SAP185	P40856	1058 aa		4.02	□□□□□ -1.77
FRE4	YNR060W	IES1	P43579	692 aa		4.02	□□□□□ -1.77
FRE4	YNR060W	YGR035C	P53222	116 aa		4.02	□□□□□ -1.77
FRE4	YNR060W	NCE103	P53615	221 aa		4.02	□□□□□ -1.77
FRE4	YNR060W	PTC5	Q12511	572 aa		4.02	□□□□□ -1.77
FRE4	YNR060W	TY4A-H	Q6Q5P6	413 aa		4.02	□□□□□ -1.77
FRE4	YNR060W	ERS1	P17261	260 aa		4.02	□□□□□ -1.77
FRE4	YNR060W	EMC3	P36039	253 aa		4.02	□□□□□ -1.77
FRE4	YNR060W	YAP1801	P38856	637 aa		4.02	□□□□□ -1.77
FRE4	YNR060W	HXT6	P39003	570 aa	Known RBP	4.02	□□□□□ -1.77
FRE4	YNR060W	HXT7	P39004	570 aa		4.02	□□□□□ -1.77
FRE4	YNR060W	MXR1	P40029	184 aa		4.02	□□□□□ -1.77
FRE4	YNR060W	QRI7	P43122	407 aa		4.02	□□□□□ -1.77
FRE4	YNR060W	YFL066C	P43538	392 aa		4.02	□□□□□ -1.77
FRE4	YNR060W	HXT16	P47185	567 aa		4.02	□□□□□ -1.77
FRE4	YNR060W	ENV7	Q12003	364 aa		4.02	□□□□□ -1.77
FRE4	YNR060W	ADE8	P04161	214 aa		4.01	□□□□□ -1.77
FRE4	YNR060W	CCR4	P31384	837 aa	Known RBP	4.01	□□□□□ -1.77
FRE4	YNR060W	PPH3	P32345	308 aa		4.01	□□□□□ -1.77
FRE4	YNR060W	REC104	P33323	182 aa		4.01	□□□□□ -1.77
FRE4	YNR060W	SER1	P33330	395 aa	Known RBP	4.01	□□□□□ -1.77
FRE4	YNR060W	YRO2	P38079	344 aa		4.01	□□□□□ -1.77
FRE4	YNR060W	YBR238C	P38330	731 aa	Known RBP	4.01	□□□□□ -1.77
FRE4	YNR060W	NEO1	P40527	1151 aa		4.01	□□□□□ -1.77
FRE4	YNR060W	BNA1	P47096	177 aa		4.01	□□□□□ -1.77
FRE4	YNR060W	GCV1	P48015	400 aa		4.01	□□□□□ -1.77
FRE4	YNR060W	PAP2	P53632	584 aa	Known RBP	4.01	□□□□□ -1.77
FRE4	YNR060W	YNR063W	P53749	607 aa		4.01	□□□□□ -1.77
FRE4	YNR060W	MEC3	Q02574	474 aa		4.01	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 10.5 ms