RNA–Protein interactions for RNA: YNL222W

SSU72, Transcript of Phosphatase and transcription/RNA-processing factor, yeastyeast

Gene SSU72, Length 621 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSU72YNL222W AFR1P33304 620 aa6.26□□□□□ -1.41
SSU72YNL222W YER158CP40095 573 aa6.26□□□□□ -1.41
SSU72YNL222W TMA10Q06177 86 aa6.26□□□□□ -1.41
SSU72YNL222W YPR196WQ06595 470 aa6.26□□□□□ -1.41
SSU72YNL222W ADY3Q07732 790 aa6.26□□□□□ -1.41
SSU72YNL222W FMP25Q08023 583 aa6.26□□□□□ -1.41
SSU72YNL222W RAD4P14736 754 aa6.25□□□□□ -1.41
SSU72YNL222W CTS1P29029 562 aa6.25□□□□□ -1.41
SSU72YNL222W HBS1P32769 611 aaKnown RBP6.25□□□□□ -1.41
SSU72YNL222W YRO2P38079 344 aa6.25□□□□□ -1.41
SSU72YNL222W ERT1P38140 529 aa6.25□□□□□ -1.41
SSU72YNL222W TSL1P38427 1098 aaKnown RBP6.25□□□□□ -1.41
SSU72YNL222W ALR2P43553 858 aa6.25□□□□□ -1.41
SSU72YNL222W GYP7P48365 746 aa6.25□□□□□ -1.41
SSU72YNL222W YLR224WQ05947 369 aa6.25□□□□□ -1.41
SSU72YNL222W SPE1P08432 466 aa6.24□□□□□ -1.41
SSU72YNL222W LST4P34239 828 aa6.24□□□□□ -1.41
SSU72YNL222W MPT5P39016 859 aaKnown RBP RIP-Chip data6.24□□□□□ -1.41not detected
SSU72YNL222W TPO2P53283 614 aa6.24□□□□□ -1.41
SSU72YNL222W UBX5Q06682 500 aa6.24□□□□□ -1.41
SSU72YNL222W ADE8P04161 214 aa6.23□□□□□ -1.41
SSU72YNL222W HSF1P10961 833 aa6.23□□□□□ -1.41
SSU72YNL222W RPL8BP29453 256 aaKnown RBP6.23□□□□□ -1.41
SSU72YNL222W SHM2P37291 469 aaKnown RBP6.23□□□□□ -1.41
SSU72YNL222W CCC2P38995 1004 aa6.23□□□□□ -1.41
SSU72YNL222W MET12P46151 657 aa6.23□□□□□ -1.41
SSU72YNL222W NOP12Q08208 459 aaKnown RBP6.23□□□□□ -1.41
SSU72YNL222W SIT1P39980 628 aa6.22□□□□□ -1.41
SSU72YNL222W EAF1Q06337 982 aa6.22□□□□□ -1.41
SSU72YNL222W CDC48P25694 835 aaKnown RBP6.21□□□□□ -1.42
SSU72YNL222W YKR078WP36158 585 aaKnown RBP6.21□□□□□ -1.42
SSU72YNL222W YBR284WP38150 797 aa6.21□□□□□ -1.42
SSU72YNL222W TIM54P47045 478 aa6.21□□□□□ -1.42
SSU72YNL222W PSP2P50109 593 aaKnown RBP6.21□□□□□ -1.42
SSU72YNL222W MCM6P53091 1017 aaKnown RBP6.21□□□□□ -1.42
SSU72YNL222W SPO75Q07798 868 aa6.21□□□□□ -1.42
SSU72YNL222W HIS5P07172 385 aa6.2□□□□□ -1.42
SSU72YNL222W RPC82P32349 654 aa6.2□□□□□ -1.42
SSU72YNL222W PLB1P39105 664 aa6.2□□□□□ -1.42
SSU72YNL222W ERP6P53198 216 aa6.2□□□□□ -1.42
SSU72YNL222W WHI4Q07655 649 aaKnown RBP6.2□□□□□ -1.42
SSU72YNL222W OSH2Q12451 1283 aa6.2□□□□□ -1.42
SSU72YNL222W ARE1P25628 610 aa6.19□□□□□ -1.42
SSU72YNL222W TOK1P40310 691 aa6.19□□□□□ -1.42
SSU72YNL222W UTP8P53276 713 aaKnown RBP6.19□□□□□ -1.42
SSU72YNL222W BUL2Q03758 920 aaKnown RBP6.19□□□□□ -1.42
SSU72YNL222W YPR071WQ12346 211 aa6.19□□□□□ -1.42
SSU72YNL222W NOT3P06102 836 aaKnown RBP6.18□□□□□ -1.42
SSU72YNL222W STE11P23561 717 aa6.18□□□□□ -1.42
SSU72YNL222W YBR238CP38330 731 aaKnown RBP6.18□□□□□ -1.42
SSU72YNL222W MNN10P50108 393 aaKnown RBP6.18□□□□□ -1.42
SSU72YNL222W YKE2P52553 114 aa6.18□□□□□ -1.42
SSU72YNL222W LCD1Q04377 747 aa6.18□□□□□ -1.42
SSU72YNL222W CDC11P32458 415 aa6.17□□□□□ -1.42
SSU72YNL222W CHA4P43634 648 aa6.17□□□□□ -1.42
SSU72YNL222W RAI1P53063 387 aaKnown RBP6.17□□□□□ -1.42
SSU72YNL222W YGR125WP53273 1036 aa6.17□□□□□ -1.42
SSU72YNL222W HBN1Q96VH4 193 aa6.17□□□□□ -1.42
SSU72YNL222W RPP2AP05319 106 aaKnown RBP6.16□□□□□ -1.42
SSU72YNL222W HSP60P19882 572 aaKnown RBP6.16□□□□□ -1.42
SSU72YNL222W YJL049WP47048 450 aa6.16□□□□□ -1.42
SSU72YNL222W CCM1P48237 864 aaPredicted RBP6.16□□□□□ -1.42
SSU72YNL222W KCS1Q12494 1050 aa6.16□□□□□ -1.42
SSU72YNL222W TOP3P13099 656 aa6.15□□□□□ -1.42
SSU72YNL222W MSD1P15179 658 aaKnown RBP6.15□□□□□ -1.42
SSU72YNL222W HUL5P53119 910 aa6.15□□□□□ -1.42
SSU72YNL222W CIT1P00890 479 aa6.14□□□□□ -1.43
SSU72YNL222W HCM1P25364 564 aa6.14□□□□□ -1.43
SSU72YNL222W REC104P33323 182 aa6.14□□□□□ -1.43
SSU72YNL222W ATG19P35193 415 aa6.14□□□□□ -1.43
SSU72YNL222W YHR020WP38708 688 aaKnown RBP6.14□□□□□ -1.43
SSU72YNL222W URM1P40554 99 aaPredicted RBP6.14□□□□□ -1.43
SSU72YNL222W NPL3Q01560 414 aaKnown RBP RIP-Chip data6.14□□□□□ -1.43not detected
SSU72YNL222W NPC2Q12408 173 aa6.14□□□□□ -1.43
SSU72YNL222W RPD3P32561 433 aa6.13□□□□□ -1.43
SSU72YNL222W PET10P36139 283 aa6.13□□□□□ -1.43
SSU72YNL222W PHO23P50947 330 aa6.13□□□□□ -1.43
SSU72YNL222W NCS6P53088 359 aa6.13□□□□□ -1.43
SSU72YNL222W SSL1Q04673 461 aaPredicted RBP6.13□□□□□ -1.43
SSU72YNL222W GSF2Q04697 403 aaKnown RBP6.13□□□□□ -1.43
SSU72YNL222W BDF2Q07442 638 aa6.13□□□□□ -1.43
SSU72YNL222W FLC1Q08967 793 aa6.13□□□□□ -1.43
SSU72YNL222W RFA1P22336 621 aaKnown RBP6.12□□□□□ -1.43
SSU72YNL222W STE13P33894 931 aa6.12□□□□□ -1.43
SSU72YNL222W NNF1P47149 201 aa6.11□□□□□ -1.43
SSU72YNL222W EXG2P52911 562 aa6.11□□□□□ -1.43
SSU72YNL222W TAF8Q03750 510 aa6.11□□□□□ -1.43
SSU72YNL222W YDL124WQ07551 312 aaKnown RBP6.11□□□□□ -1.43
SSU72YNL222W CDC53Q12018 815 aaKnown RBP6.11□□□□□ -1.43
SSU72YNL222W UPC2Q12151 913 aa6.11□□□□□ -1.43
SSU72YNL222W TUB2P02557 457 aaKnown RBP6.1□□□□□ -1.43
SSU72YNL222W DCG1P32460 244 aa6.1□□□□□ -1.43
SSU72YNL222W HUL4P40985 892 aa6.1□□□□□ -1.43
SSU72YNL222W IOC3P43596 787 aa6.1□□□□□ -1.43
SSU72YNL222W VPS30Q02948 557 aa6.1□□□□□ -1.43
SSU72YNL222W NSE3Q05541 303 aa6.1□□□□□ -1.43
SSU72YNL222W NTO1Q12311 748 aa6.1□□□□□ -1.43
SSU72YNL222W PMA1P05030 918 aaKnown RBP6.09□□□□□ -1.43
SSU72YNL222W TRM2P33753 639 aa6.09□□□□□ -1.43
SSU72YNL222W BET3P36149 193 aa6.09□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 32.2 ms