RNA–Protein interactions for RNA: YNL207W

RIO2, Essential serine kinase involved in the processing of 20S pre-rRNA, yeast

Gene RIO2, Length 1,278 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RIO2	YNL207W	STE11	P23561	717 aa		4.1	□□□□□ -1.75
RIO2	YNL207W	TRM2	P33753	639 aa		4.1	□□□□□ -1.75
RIO2	YNL207W	PBY1	P38254	753 aa		4.1	□□□□□ -1.75
RIO2	YNL207W	TSL1	P38427	1098 aa	Known RBP	4.1	□□□□□ -1.75
RIO2	YNL207W	CHA4	P43634	648 aa		4.1	□□□□□ -1.75
RIO2	YNL207W	GYP7	P48365	746 aa		4.1	□□□□□ -1.75
RIO2	YNL207W	YGR012W	P53206	393 aa		4.1	□□□□□ -1.75
RIO2	YNL207W	TDA5	Q06417	326 aa	Known RBP	4.1	□□□□□ -1.75
RIO2	YNL207W	HIS5	P07172	385 aa		4.09	□□□□□ -1.75
RIO2	YNL207W	SPE1	P08432	466 aa		4.09	□□□□□ -1.75
RIO2	YNL207W	ENA1	P13587	1091 aa		4.09	□□□□□ -1.75
RIO2	YNL207W	HBS1	P32769	611 aa	Known RBP	4.09	□□□□□ -1.75
RIO2	YNL207W	POA1	P38218	177 aa		4.09	□□□□□ -1.75
RIO2	YNL207W	YBR238C	P38330	731 aa	Known RBP	4.09	□□□□□ -1.75
RIO2	YNL207W	MNN10	P50108	393 aa	Known RBP	4.09	□□□□□ -1.75
RIO2	YNL207W	YKE2	P52553	114 aa		4.09	□□□□□ -1.75
RIO2	YNL207W	ENA2	Q01896	1091 aa		4.09	□□□□□ -1.75
RIO2	YNL207W	SRP1	Q02821	542 aa	Known RBP	4.09	□□□□□ -1.75
RIO2	YNL207W	BUL2	Q03758	920 aa	Known RBP	4.09	□□□□□ -1.75
RIO2	YNL207W	YDR306C	Q06640	478 aa		4.09	□□□□□ -1.75
RIO2	YNL207W	ENA5	Q12691	1091 aa		4.09	□□□□□ -1.75
RIO2	YNL207W	YKR078W	P36158	585 aa	Known RBP	4.08	□□□□□ -1.76
RIO2	YNL207W	ERT1	P38140	529 aa		4.08	□□□□□ -1.76
RIO2	YNL207W	YBR184W	P38299	523 aa		4.08	□□□□□ -1.76
RIO2	YNL207W	PLB1	P39105	664 aa		4.08	□□□□□ -1.76
RIO2	YNL207W	IRR1	P40541	1150 aa		4.08	□□□□□ -1.76
RIO2	YNL207W	MSE1	P48525	536 aa		4.08	□□□□□ -1.76
RIO2	YNL207W	MCM6	P53091	1017 aa	Known RBP	4.08	□□□□□ -1.76
RIO2	YNL207W	URN1	Q06525	465 aa	Known RBP	4.08	□□□□□ -1.76
RIO2	YNL207W	PUS9	Q12069	462 aa		4.08	□□□□□ -1.76
RIO2	YNL207W	HSF1	P10961	833 aa		4.07	□□□□□ -1.76
RIO2	YNL207W	DCG1	P32460	244 aa		4.07	□□□□□ -1.76
RIO2	YNL207W	SIT1	P39980	628 aa		4.07	□□□□□ -1.76
RIO2	YNL207W	YER158C	P40095	573 aa		4.07	□□□□□ -1.76
RIO2	YNL207W	URM1	P40554	99 aa	Predicted RBP	4.07	□□□□□ -1.76
RIO2	YNL207W	WHI4	Q07655	649 aa	Known RBP	4.07	□□□□□ -1.76
RIO2	YNL207W	FMP25	Q08023	583 aa		4.07	□□□□□ -1.76
RIO2	YNL207W	KCS1	Q12494	1050 aa		4.07	□□□□□ -1.76
RIO2	YNL207W	PMA1	P05030	918 aa	Known RBP	4.06	□□□□□ -1.76
RIO2	YNL207W	GRX1	P25373	110 aa	Known RBP	4.06	□□□□□ -1.76
RIO2	YNL207W	RPC82	P32349	654 aa		4.06	□□□□□ -1.76
RIO2	YNL207W	PHO23	P50947	330 aa		4.06	□□□□□ -1.76
RIO2	YNL207W	EXG2	P52911	562 aa		4.06	□□□□□ -1.76
RIO2	YNL207W	NTO1	Q12311	748 aa		4.06	□□□□□ -1.76
RIO2	YNL207W	HCM1	P25364	564 aa		4.05	□□□□□ -1.76
RIO2	YNL207W	CCC2	P38995	1004 aa		4.05	□□□□□ -1.76
RIO2	YNL207W	NCS6	P53088	359 aa		4.05	□□□□□ -1.76
RIO2	YNL207W	LAS17	Q12446	633 aa		4.05	□□□□□ -1.76
RIO2	YNL207W	CDC48	P25694	835 aa	Known RBP	4.04	□□□□□ -1.76
RIO2	YNL207W	PPH3	P32345	308 aa		4.04	□□□□□ -1.76
RIO2	YNL207W	AAR2	P32357	355 aa	Predicted RBP	4.04	□□□□□ -1.76
RIO2	YNL207W	PRP9	P19736	530 aa	Known RBP	4.03	□□□□□ -1.76
RIO2	YNL207W	RPL8B	P29453	256 aa	Known RBP	4.03	□□□□□ -1.76
RIO2	YNL207W	STE14	P32584	239 aa		4.03	□□□□□ -1.76
RIO2	YNL207W	YRO2	P38079	344 aa		4.03	□□□□□ -1.76
RIO2	YNL207W	TOK1	P40310	691 aa		4.03	□□□□□ -1.76
RIO2	YNL207W	PSP2	P50109	593 aa	Known RBP	4.03	□□□□□ -1.76
RIO2	YNL207W	RAI1	P53063	387 aa	Known RBP	4.03	□□□□□ -1.76
RIO2	YNL207W	UTP8	P53276	713 aa	Known RBP	4.03	□□□□□ -1.76
RIO2	YNL207W	NAN1	Q02931	896 aa	Known RBP	4.03	□□□□□ -1.76
RIO2	YNL207W	YPR196W	Q06595	470 aa		4.03	□□□□□ -1.76
RIO2	YNL207W	WRS1	Q12109	432 aa	Known RBP	4.03	□□□□□ -1.76
RIO2	YNL207W	UPC2	Q12151	913 aa		4.03	□□□□□ -1.76
RIO2	YNL207W	NPC2	Q12408	173 aa		4.03	□□□□□ -1.76
RIO2	YNL207W	ADE8	P04161	214 aa		4.02	□□□□□ -1.77
RIO2	YNL207W	RPP2A	P05319	106 aa	Known RBP	4.02	□□□□□ -1.77
RIO2	YNL207W	PMI40	P29952	429 aa	Known RBP	4.02	□□□□□ -1.77
RIO2	YNL207W	ALR2	P43553	858 aa		4.02	□□□□□ -1.77
RIO2	YNL207W	BUL1	P48524	976 aa		4.02	□□□□□ -1.77
RIO2	YNL207W	SLI1	P53304	468 aa		4.02	□□□□□ -1.77
RIO2	YNL207W	SUN4	P53616	420 aa		4.02	□□□□□ -1.77
RIO2	YNL207W	SLU7	Q02775	382 aa	Known RBP	4.02	□□□□□ -1.77
RIO2	YNL207W	NOT3	P06102	836 aa	Known RBP	4.01	□□□□□ -1.77
RIO2	YNL207W	FBP1	P09201	348 aa		4.01	□□□□□ -1.77
RIO2	YNL207W	RAD4	P14736	754 aa		4.01	□□□□□ -1.77
RIO2	YNL207W	STE13	P33894	931 aa		4.01	□□□□□ -1.77
RIO2	YNL207W	ATG19	P35193	415 aa		4.01	□□□□□ -1.77
RIO2	YNL207W	DEF1	P35732	738 aa	Known RBP	4.01	□□□□□ -1.77
RIO2	YNL207W	SSL1	Q04673	461 aa	Predicted RBP	4.01	□□□□□ -1.77
RIO2	YNL207W	UBX5	Q06682	500 aa		4.01	□□□□□ -1.77
RIO2	YNL207W	HBN1	Q96VH4	193 aa		4.01	□□□□□ -1.77
RIO2	YNL207W	TOP3	P13099	656 aa		4	□□□□□ -1.77
RIO2	YNL207W	KAR4	P25583	335 aa		4	□□□□□ -1.77
RIO2	YNL207W	PET10	P36139	283 aa		4	□□□□□ -1.77
RIO2	YNL207W	YBR284W	P38150	797 aa		4	□□□□□ -1.77
RIO2	YNL207W	YHR020W	P38708	688 aa	Known RBP	4	□□□□□ -1.77
RIO2	YNL207W	CHS7	P38843	316 aa		4	□□□□□ -1.77
RIO2	YNL207W	MSS4	P38994	779 aa		4	□□□□□ -1.77
RIO2	YNL207W	KIN4	Q01919	800 aa		4	□□□□□ -1.77
RIO2	YNL207W	LCD1	Q04377	747 aa		4	□□□□□ -1.77
RIO2	YNL207W	YPR071W	Q12346	211 aa		4	□□□□□ -1.77
RIO2	YNL207W	MSD1	P15179	658 aa	Known RBP	3.99	□□□□□ -1.77
RIO2	YNL207W	RPD3	P32561	433 aa		3.99	□□□□□ -1.77
RIO2	YNL207W	CCM1	P48237	864 aa	Predicted RBP	3.99	□□□□□ -1.77
RIO2	YNL207W	ERP6	P53198	216 aa		3.99	□□□□□ -1.77
RIO2	YNL207W	TPO2	P53283	614 aa		3.99	□□□□□ -1.77
RIO2	YNL207W	HDA1	P53973	706 aa		3.99	□□□□□ -1.77
RIO2	YNL207W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	3.99	□□□□□ -1.77	not detected
RIO2	YNL207W	EAF1	Q06337	982 aa		3.99	□□□□□ -1.77
RIO2	YNL207W	ENB1	Q08299	606 aa		3.99	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 59.3 ms